Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: pypi: fq2fa

https://packages.ecosyste.ms/registries/pypi.org/packages/fq2fa

Convert fastq to fasta sequences
4 versions
Latest release: over 7 years ago
17 downloads last month

Papers Mentioning fq2fa 5

10.1371/journal.pone.0169662
Comparing and Evaluating Metagenome Assembly Tools from a Microbiologist’s Perspective - Not Only Size Matters!
Cited by: 171
Author(s): John Vollmers, Sandra Wiegand, Anne‐Kristin Kaster
Software Mentions: 11
Published: almost 8 years ago
10.1080/19490976.2021.1921924
The microbiome of deep-sea fish reveals new microbial species and a sparsity of antibiotic resistance genes
Cited by: 15
Author(s): Fergus W. J. Collins, Calum J. Walsh, Beatriz Gómez‐Sala, E. Guijarro-García, David J. Stokes, Klara B. Jakobsdóttir, Kristján Kristjánsson, Finlay Burns, Paul D. Cotter, Mary C. Rea, Colin Hill, R. Paul Ross
Software Mentions: 7
Published: almost 4 years ago
10.7717/peerj.3817
Benchmarking viromics: an <i>in silico</i> evaluation of metagenome-enabled estimates of viral community composition and diversity
Cited by: 208
Author(s): Simon Roux, Joanne B. Emerson, Emiley A. Eloe‐Fadrosh, Matthew B. Sullivan
Software Mentions: 5
Published: about 7 years ago
10.1534/g3.113.005967
PRICE: Software for the Targeted Assembly of Components of (Meta) Genomic Sequence Data
Cited by: 242
Author(s): J. Graham Ruby, Priya Bellare, Joseph L. DeRisi
Software Mentions: 3
Published: over 11 years ago
10.1038/srep25373
Improved metagenome assemblies and taxonomic binning using long-read circular consensus sequence data
Cited by: 124
Author(s): Jeremy A. Frank, Yao Pan, Ave Tooming‐Klunderud, Vincent G. H. Eijsink, Alice C. McHardy, Alexander J. Nederbragt, Phillip B. Pope
Software Mentions: 2
Published: over 8 years ago