Projects: pypi: redundans
https://packages.ecosyste.ms/registries/pypi.org/packages/redundans
Redundans is a pipeline that assists an assembly of heterozygous/polymorphic genomes.
6 versions
Latest release: over 9 years ago
24 downloads last month
Enhanced Analysis
Educational Contributors:
waoki@umnh.utah.edu
jason.stajich@ucr.edu
Repository Activity:
Repository Owner:
Gabaldon lab (organization)
Github repository of Gabaldon lab Academic
Github repository of Gabaldon lab Academic
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
-
+40
Educational commit emails
2 contributors with educational email addresses -
+20
Academic repository owner
Repository owned by academic institution -
+15
Institutional repository owner
Repository owned by research institution -
+10
Science terms in README
5 scientific terms found in README -
+20
DOI references
2 DOI references found in README
Penalties:
-
-10
PyPI ecosystem
General-purpose ecosystem -
-15
No science keywords
No scientific terms found in keywords/classifiers -
-10
No science terms in description
No scientific terms found in description -
-50
Non-science indicators
2 non-scientific terms found
Very Likely Science (100)
Papers Mentioning redundans 5
10.3389/fmicb.2021.645353
Genome and Evolutionary Analysis of Nosema ceranae: A Microsporidian Parasite of Honey BeesCited by: 10
Author(s): Qiang Huang, Zhi Hao Wu, Wen Feng Li, Rui Guo, Jin Shan Xu, Xiao Qun Dang, Gang Zheng, Yan Ping Chen, Jay D. Evans
Software Mentions: 3
Published: about 5 years ago
10.1186/s12862-019-1484-2
The genome of the live-bearing fish Heterandria formosa implicates a role of conserved vertebrate genes in the evolution of placental fishCited by: 7
Author(s): Henri van Kruistum, Joost van den Heuvel, Joseph Travis, Ken Kraaijeveld, Bas J. Zwaan, M.A.M. Groenen, Hendrik Jan Megens, Bart J. A. Pollux
Software Mentions: 2
Published: almost 7 years ago
10.1186/s13059-019-1925-7
Gene content evolution in the arthropodsCited by: 133
Author(s): Gregg W.C. Thomas, Elias Dohmen, Daniel Hughes, Shwetha C. Murali, Monica Poelchau, Karl M. Glastad, Clare A. Anstead, Nadia A. Ayoub, Philip Batterham, Michelle Bellair, Greta J. Binford, Hsu Chao, Yolanda H. Chen, Christopher P. Childers, Huyen Dinh, Harshavardhan Doddapaneni, Jian J. Duan, Shannon Dugan, Lauren A. Esposito, Markus Friedrich, Jessica E. Garb, Robin B. Gasser, Michael A. D. Goodisman, Dawn E. Gundersen‐Rindal, Yi Han, Alfred M. Handler, Masatsugu Hatakeyama, Lars Hering, Wayne B. Hunter, Panagiotis Ioannidis, Joy C. Jayaseelan, Dipak Kalra, Abderrahman Khila, Pasi K. Korhonen, Carol Eunmi Lee, Sandra L. Lee, Yiyuan Li, Amelia R.I. Lindsey, Georg Mayer, Alistair P. McGregor, Duane D. McKenna, Bernhard Misof, Mala Munidasa, Monica Muñoz-Torres, Donna M. Muzny, Oliver Niehuis, Nkechinyere Osuji-Lacy, Subba Reddy Palli, Kristen A. Panfilio, Matthias Pechmann, Trent Perry, Ralph S. Peters, Helen C. Poynton, Nikola Michael Prpic, Jiaxin Qu, Dorith Rotenberg, Coby Schal, Sean D. Schoville, Erin D. Scully, Evette Skinner, Daniel B. Sloan, Richard Stouthamer, Michael R. Strand, Nikolaus U. Szucsich, Asela J. Wijeratne, Neil D. Young, Eduardo E. Zattara, Joshua B. Benoit, Evgeny M. Zdobnov, Michael E. Pfrender, Kevin J. Hackett, John H. Werren, Kim C. Worley, Richard A. Gibbs, Ariel D. Chipman, Robert M. Waterhouse, Erich Bornberg‐Bauer, Matthew W. Hahn, Stephen Richards
Software Mentions: 2
Published: over 6 years ago
10.1093/gigascience/giz023
A draft nuclear-genome assembly of the acoel flatworm<i>Praesagittifera naikaiensis</i>Cited by: 15
Author(s): Asuka Arimoto, Tomoe Hikosaka-Katayama, Akira Hikosaka, Kunifumi Tagawa, Toyoshige Inoue, Tomoyuki Ueki, Masa‐aki Yoshida, Miyuki Kanda, Eiichi Shoguchi, Kanako Hisata, Noriyuki Satoh
Software Mentions: 2
Published: about 7 years ago
10.1098/rsob.200362
Shared evolutionary footprints suggest mitochondrial oxidative damage underlies multiple complex I losses in fungiCited by: 8
Author(s): Miquel Àngel Schikora-Tamarit, Marina Marcet‐Houben, Jozef Nosek, Toni Gabaldón
Software Mentions: 1
Published: about 5 years ago