cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.1038/s41598-021-85855-6

Developing a non-destructive metabarcoding protocol for detection of pest insects in bulk trap catches
Cited by: 29
Author(s): Jana Batovska, Alexander M. Piper, Isabel Valenzuela, John Paul Cunningham, Mark J. Blacket
Software Mentions: 7
Published: about 5 years ago

10.3389/fpls.2016.01446

A Developmental Transcriptome Map for Allotetraploid Arachis hypogaea
Cited by: 149
Author(s): Josh Clevenger, Ye Chu, Brian E. Scheffler, Peggy Ozias‐Akins
Software Mentions: 7
Published: over 9 years ago

10.18632/aging.202490

Long non-coding RNA TP73-AS1 is a potential immune related prognostic biomarker for glioma
Cited by: 8
Author(s): Bo Zhang, Qinglin Li, Bin Wu, Shuyuan Zhang, Liwen Liu, Kai Jin, Sheng Li, Kai Li, Zeng Wang, Yi Lu, Xiaofeng Liang, Chao Sun
Software Mentions: 7
Published: over 5 years ago

10.1038/s41598-021-87368-8

Alteration of the gut fecal microbiome in children living with HIV on antiretroviral therapy in Yaounde, Cameroon
Cited by: 12
Author(s): William Baiye Abange, Casey Martin, Aubin Nanfack, Laeticia Grace Yatchou, Nichole M. Nusbacher, Clement Assob Nguedia, Hortense Gonsu Kamga, Joseph Fokam, Sean Kennedy, Alexis Ndjolo, Catherine Lozupone, Céline Nguefeu Nkenfou
Software Mentions: 7
Published: about 5 years ago

10.3389/fpls.2020.01085

Biomonitoring of Polycyclic Aromatic Hydrocarbon Deposition in Greenland Using Historical Moss Herbarium Specimens Shows a Decrease in Pollution During the 20th Century
Cited by: 12
Author(s): Karen Martinez-Swatson, Eszter Mihály, Christian Lange, Madeleine Ernst, Majbrit Dela Cruz, Michelle Price, Teis Nørgaard Mikkelsen, Jan H. Christensen, Nina Lundholm, Nina Rønsted
Software Mentions: 7
Published: almost 6 years ago

10.3389/fpls.2021.639631

Local Duplication of TIR-NBS-LRR Gene Marks Clubroot Resistance in Brassica napus cv. Tosca
Cited by: 11
Author(s): Piotr M. Kopec, Katarzyna Mikołajczyk, E. Jajor, A. Perek, Joanna Nowakowska, Christian Obermeier, Harmeet Singh Chawla, M. Korbas, I. Bartkowiak-Broda, Wojciech M. Karłowski
Software Mentions: 7
Published: about 5 years ago

10.1002/ece3.7332

Bottom‐up effects of fungicides on tadpoles of the European common frog ( Rana temporaria )
Cited by: 1
Author(s): Mirco Bundschuh, Jochen P. Zubrod, Theo Wernicke, Marco Konschak, Leon Werner, Carsten A. Brühl, Patrick Baudy, Ralf Schulz
Software Mentions: 7
Published: over 5 years ago

10.1186/s13046-019-1505-4

A pre-existing population of ZEB2+ quiescent cells with stemness and mesenchymal features dictate chemoresistance in colorectal cancer
Cited by: 54
Author(s): Federica Francescangeli, Paola Contavalli, Maria Laura De Angelis, Silvia Careccia, Michele Signore, Tobias Haas, Federico Salaris, Marta Baiocchi, Alessandra Boe, Alessandro Giuliani, Olga Tcheremenskaia, Alfredo Pagliuca, Ombretta Guardiola, Gabriella Minchiotti, Lidia Colace, Antonio Ciardi, Vito D’Andrea, Filippo La Torre, Jan Paul Medema, Ruggero De Maria, Ann Zeuner
Software Mentions: 7
Published: over 6 years ago

10.1002/ece3.6062

Remotely sensed forest understory density and nest predator occurrence interact to predict suitable breeding habitat and the occurrence of a resident boreal bird species
Cited by: 8
Author(s): Julian Klein, Paul J. Haverkamp, Eva Lindberg, Michael Griesser, Sönke Eggers
Software Mentions: 7
Published: over 6 years ago

10.1111/plb.13244

Connective appendages in Huberia bradeana (Melastomataceae) affect pollen release during buzz pollination
Cited by: 16
Author(s): Thuane Bochorny, Lucas F. Bacci, Agnes S. Dellinger, Fabián A. Michelangeli, Renato Goldenberg, Vinícius Lourenço Garcia de Brito
Software Mentions: 7
Published: over 5 years ago

10.3389/fpls.2019.01521

The Contribution of Functional Traits to the Breeding Progress of Central-European Winter Wheat Under Differing Crop Management Intensities
Cited by: 14
Author(s): Till Rose, Henning Kage
Software Mentions: 7
Published: over 6 years ago

10.7717/peerj.11018

Integrated analysis of immune-related long noncoding RNAs as diagnostic biomarkers in psoriasis
Cited by: 13
Author(s): Feixiang Fan, Zhen Huang, Yongfeng Chen
Software Mentions: 7
Published: over 5 years ago

10.1371/journal.pone.0232306

A new automated chilled adult release system for the aerial distribution of sterile male tsetse flies
Cited by: 4
Author(s): Caroline K. Mirieri, Gratian N. Mutika, Jimmy Bruno, Momar Talla Seck, Baba Sall, Andrew G. Parker, Monique M. van Oers, Marc J. B. Vreysen, Jérémy Bouyer, Adly M. M. Abd-Alla
Software Mentions: 7
Published: over 5 years ago

10.3390/microorganisms8101528

Metabolic Response of Faecalibacterium prausnitzii to Cell-Free Supernatants from Lactic Acid Bacteria
Cited by: 14
Author(s): Mathilde Lebas, Peggy Garault, Daniel Carrillo, Francisco M. Codoñer, Muriel Derrien
Software Mentions: 7
Published: over 5 years ago

10.1002/ece3.3943

Seasonal bat activity related to insect emergence at three temperate lakes
Cited by: 26
Author(s): Ioanna Salvarina, Dorian Gravier, Karl‐Otto Rothhaupt
Software Mentions: 7
Published: over 8 years ago

10.1186/s12885-017-3689-3

GRcalculator: an online tool for calculating and mining dose–response data
Cited by: 57
Author(s): Nicholas Clark, Marc Hafner, Michal Kouril, Liz Williams, Jeremy Muhlich, Marcin Pilarczyk, Mario Niepel, Peter K. Sorger, Mario Medvedovic
Software Mentions: 7
Published: over 8 years ago

10.3389/fpls.2019.01581

Expression QTL (eQTLs) Analyses Reveal Candidate Genes Associated With Fruit Flesh Softening Rate in Peach [Prunus persica (L.) Batsch]
Cited by: 24
Author(s): Tomás Carrasco-Valenzuela, Claudia Muñoz-Espinoza, Aníbal Riveros, Romina Pedreschi, Pere Arús, Reinaldo Campos-Vargas, Claudio Meneses
Software Mentions: 7
Published: over 6 years ago

10.1038/s41598-021-80970-w

Breath can discriminate tuberculosis from other lower respiratory illness in children
Cited by: 19
Author(s): Carly A. Bobak, Lili Kang, Lesley Workman, Lindy Bateman, Mohammad Sharif Khan, Margaretha Prins, Lloyd May, Flavio A. Franchina, Cynthia Baard, Mark P. Nicol, Heather J. Zar, Jane E. Hill
Software Mentions: 7
Published: over 5 years ago

10.1186/s12915-021-01134-w

Comparative analysis reveals within-population genome size variation in a rotifer is driven by large genomic elements with highly abundant satellite DNA repeat elements
Cited by: 7
Author(s): Claus‐Peter Stelzer, Julie Blommaert, Ann‐Marie Waldvogel, Maria Pichler, Bette Hecox-Lea, David Welch
Software Mentions: 7
Published: almost 5 years ago

10.3389/fmicb.2019.02286

Yeasts of Burden: Exploring the Mycobiome–Bacteriome of the Piglet GI Tract
Cited by: 35
Author(s): Ann M. Arfken, Juli Foster Frey, Timothy Ramsay, Katie Lynn Summers
Software Mentions: 7
Published: over 6 years ago

10.1155/2018/3149495

Development of Regional Disparities in Alzheimer’s Disease Mortality in the Slovak Republic from 1996 to 2015
Cited by: 2
Author(s): Beata Gavurová, Viliam Kováč, D Jarcusková
Software Mentions: 7
Published: over 7 years ago

10.1038/s41598-020-63186-2

Socially engaged calves are more likely to be colonised by VTEC O157:H7 than individuals showing signs of poor welfare
Cited by: 4
Author(s): Lena-Mari Tamminen, C. Reed Hranac, Johan Dicksved, Erik Eriksson, Ulf Emanuelson, Linda J. Keeling
Software Mentions: 7
Published: about 6 years ago

10.1038/s41598-020-61645-4

The Impact of Voice Leading and Harmony on Musical Expectancy
Cited by: 3
Author(s): Leona Wall, Robert Lieck, Markus Neuwirth, Martin Rohrmeier
Software Mentions: 7
Published: about 6 years ago

10.3389/fonc.2020.553399

CD8+ T Cell Co-Expressed Genes Correlate With Clinical Phenotype and Microenvironments of Urothelial Cancer
Cited by: 20
Author(s): Yutao Wang, Kexin Yan, Jiaxing Lin, Yang Liu, Jianfeng Wang, Xuejie Li, Xinxin Li, Zhixiong Hua, Zhenhua Zheng, Jianxiu Shi, Siqing Sun, Jianbin Bi
Software Mentions: 7
Published: over 5 years ago

10.1371/journal.pone.0258157

Dynamically expressed genes provide candidate viability biomarkers in a model coccidian
Cited by: 4
Author(s): Matthew S. Tucker, Celia O’Brien, Mark C. Jenkins, Benjamin M. Rosenthal
Software Mentions: 7
Published: over 4 years ago

10.1371/journal.pone.0237893

The response of culturally important plants to experimental warming and clipping in Pakistan Himalayas
Cited by: 2
Author(s): Saira Karimi, Muhammad Ali Nawaz, Saadia Naseem, Ahmed Akrem, Hussain Ali, Olivier Dangles, Zahid Ali
Software Mentions: 7
Published: about 5 years ago

10.1371/journal.pone.0200729

The murine female intestinal microbiota does not shift throughout the estrous cycle
Cited by: 18
Author(s): Jessica G. Wallace, Ryan Potts, Jake C. Szamosi, Michael G. Surette, Deborah M. Sloboda
Software Mentions: 7
Published: almost 8 years ago

10.3389/fnins.2019.01042

Previous Musical Experience and Cortical Thickness Relate to the Beneficial Effect of Motor Synchronization on Auditory Function
Cited by: 3
Author(s): Natascha Merten, Johanna Kramme, Monique M.B. Breteler, Sibylle C. Herholz
Software Mentions: 7
Published: over 6 years ago

10.1155/2020/7147824

Construction of Protein-related Risk Score Model in Bladder Urothelial Carcinoma
Cited by: 5
Author(s): Qizhan Luo, Xiaobo Zhang
Software Mentions: 7
Published: almost 6 years ago

10.3389/fneur.2019.01117

Normative Data and Minimally Detectable Change for Inner Retinal Layer Thicknesses Using a Semi-automated OCT Image Segmentation Pipeline
Cited by: 33
Author(s): Seyedamirhosein Motamedi, K. Gawlik, Noah Ayadi, Hanna Zimmermann, Susanna Asseyer, Charlotte Bereuter, Janine Mikolajczak, Friedemann Paul, Ella-Maria Kadas, Alexander U. Brandt
Software Mentions: 7
Published: over 6 years ago

10.1038/s41598-020-60546-w

Inadequate socialisation, inactivity, and urban living environment are associated with social fearfulness in pet dogs
Cited by: 45
Author(s): Jenni Puurunen, Emma Hakanen, Milla Salonen, Salla Mikkola, Sini Sulkama, Cynthia Gobbi Alves Araújo, Hannes Lohi
Software Mentions: 7
Published: over 6 years ago

10.1371/journal.pone.0147249

Cell and Microvesicle Urine microRNA Deep Sequencing Profiles from Healthy Individuals: Observations with Potential Impact on Biomarker Studies
Cited by: 43
Author(s): Iddo Z. Ben‐Dov, Veronica M. Whalen, Béatrice Goilav, Klaas E.A. Max, Thomas Tuschl
Software Mentions: 7
Published: over 10 years ago

10.3389/fmicb.2018.01620

Rhizosphere Bacterial Communities Differ According to Fertilizer Regimes and Cabbage (Brassica oleracea var. capitata L.) Harvest Time, but Not Aphid Herbivory
Cited by: 26
Author(s): Flora Jane Mary O'Brien, Marc G. Dumont, Jeremy S. Webb, Guy M. Poppy
Software Mentions: 7
Published: almost 8 years ago

10.3390/plants9050609

Field Screening of Rice Germplasm (Oryza sativa L. ssp. japonica) Based on Days to Flowering for Drought Escape
Cited by: 7
Author(s): Muhammad Shafiq Ahmad, B. M. Wu, Huaqi Wang, Dingming Kang
Software Mentions: 7
Published: about 6 years ago

10.1093/bioinformatics/btu616

Shiny-phyloseq: Web application for interactive microbiome analysis with provenance tracking
Cited by: 112
Author(s): Paul J. McMurdie, Susan Holmes
Software Mentions: 7
Published: over 11 years ago

10.1371/journal.pone.0232682

A chronological model for the Late Paleolithic at Shuidonggou Locality 2, North China
Cited by: 10
Author(s): Fei Peng, Sam C. Lin, Ilaria Patania, Vladimir Levchenko, Jialong Guo, Huimin Wang, Xing Gao
Software Mentions: 7
Published: about 6 years ago

10.3390/jcm9061974

Dysregulation of microRNA Modulatory Network in Abdominal Aortic Aneurysm
Cited by: 13
Author(s): Daniel Zalewski, Karol P Ruszel, Andrzej Stępniewski, Dariusz Gałkowski, Jacek Bogucki, Łukasz Komsta, Przemysław Kołodziej, Paulina Chmiel, Tomasz Zubilewicz, Marcin Feldo, Janusz Kocki, Anna Bogucka‐Kocka
Software Mentions: 7
Published: almost 6 years ago

10.1371/journal.pone.0128391

Optimizing the Protection of Cattle against Escherichia coli O157:H7 Colonization through Immunization with Different Combinations of H7 Flagellin, Tir, Intimin-531 or EspA
Cited by: 27
Author(s): Tom N. McNeilly, Mairi C. Mitchell, Alexander Corbishley, Mintu Nath, Hannah Simmonds, Sean P. McAteer, Aditya Mahajan, J. C. Low, David George Emslie Smith, John F. Huntley, David L. Gally
Software Mentions: 7
Published: about 11 years ago

10.1371/journal.pone.0254293

easyFulcrum: An R package to process and analyze ecological sampling data generated using the Fulcrum mobile application
Cited by: 4
Author(s): Matteo Di Bernardo, Timothy A. Crombie, Daniel E. Cook, Erik C. Andersen
Software Mentions: 7
Published: over 4 years ago

10.3389/fmicb.2020.560336

Functional Gene Expression in Shark Bay Hypersaline Microbial Mats: Adaptive Responses
Cited by: 15
Author(s): Matthew A. Campbell, Kliti Grice, Pieter T. Visscher, Therese Morris, Hon Lun Wong, Richard Allen White, Brendan P. Burns, Marco J. L. Coolen
Software Mentions: 7
Published: over 5 years ago

10.3390/jcm10173971

A Target for Increased Mortality Risk in Critically Ill Patients: The Concept of Perpetuity
Cited by: 1
Author(s): Jarrod Mosier, Julia M. Fisher, Cameron Hypes, Edward J. Bedrick, Elizabeth Salvagio Campbell, Karen Lutrick, Charles B. Cairns
Software Mentions: 7
Published: almost 5 years ago

10.3389/fgene.2020.566579

Bioinformatics Analysis Discovers Microtubular Tubulin Beta 6 Class V (TUBB6) as a Potential Therapeutic Target in Glioblastoma
Cited by: 12
Author(s): Lan Jiang, Xiaolong Zhu, Hui Yang, Tianbing Chen, Kun Lv
Software Mentions: 7
Published: almost 6 years ago

10.3389/fneur.2021.580440

Machine Learning Models on ADC Features to Assess Brain Changes of Children With Pierre Robin Sequence
Cited by: 0
Author(s): Ying Wang, Feng Yang, Meijiao Zhu, Ming Yang
Software Mentions: 7
Published: over 5 years ago

10.1038/s41598-017-13601-y

Gut microbiome alterations in Alzheimer’s disease
Cited by: 1,108
Author(s): N. Vogt, Robert L. Kerby, Kimberly A. Dill‐McFarland, Sandra Harding, Andrew P. Merluzzi, Sterling C. Johnson, Cynthia M. Carlsson, Sanjay Asthana, Henrik Zetterberg, Kaj Blennow, Barbara B. Bendlin, Federico E. Rey
Software Mentions: 7
Published: over 8 years ago

10.1371/journal.pone.0211692

The impact of bipedal mechanical loading history on longitudinal long bone growth
Cited by: 7
Author(s): A. D. Foster
Software Mentions: 7
Published: over 7 years ago

10.18632/aging.102506

Reactive oxygen species metabolism-based prediction model and drug for patients with recurrent glioblastoma
Cited by: 7
Author(s): Nian Tan, Jianwei Liu, Ping Li, Zhaohao Sun, Jianming Pan, Wei Zhao
Software Mentions: 7
Published: over 6 years ago

10.1038/s41598-017-15712-y

Genome-wide analyses of long noncoding RNA expression profiles in lung adenocarcinoma
Cited by: 20
Author(s): Peng Zhang, Jun Wang, Bin Shan, Fulai Yuan, Bin Li, Yeping Dong, Wei Peng, Weisong Shi, Yuanda Cheng, Yang Gao, Chunfang Zhang, Chaojun Duan
Software Mentions: 7
Published: over 8 years ago

10.3389/fmicb.2020.00995

Microbiota in the Rhizosphere and Seed of Rice From China, With Reference to Their Transmission and Biogeography
Cited by: 31
Author(s): Xin Zhou, Jinting Wang, Z.F. Zhang, Wei Li, Wen Chen, Lei Cai
Software Mentions: 7
Published: almost 6 years ago

10.1242/jeb.220426

Microclimate buffering and thermal tolerance across elevations in a tropical butterfly
Cited by: 35
Author(s): Gabriela Montejo‐Kovacevich, Simon H. Martin, Joana I. Meier, Caroline Bacquet, Monica Monllor, Chris D. Jiggins, Nicola J. Nadeau
Software Mentions: 6
Published: over 6 years ago

10.3389/fmicb.2018.02681

Ice Nucleation Activity and Aeolian Dispersal Success in Airborne and Aquatic Microalgae
Cited by: 36
Author(s): Sylvie V. M. Tesson, Tina Šantl-Temkiv
Software Mentions: 6
Published: over 7 years ago

10.3390/biology10080734

Genetic Diversity and Population Differentiation of Kashgarian Loach (Triplophysa yarkandensis) in Xinjiang Tarim River Basin
Cited by: 4
Author(s): Xiaoyun Zhou, Shaokui Yi, Wenhao Zhao, Qiong Zhou, Jianzhong Shen, Dapeng Li, Bin Huo, Rong Tang
Software Mentions: 6
Published: almost 5 years ago

10.1038/s42003-020-01524-w

Substrate thermal properties influence ventral brightness evolution in ectotherms
Cited by: 6
Author(s): Jonathan Goldenberg, Liliana D’Alba, Karen Bisschop, Bram Vanthournout, Matthew D. Shawkey
Software Mentions: 6
Published: over 5 years ago

10.1371/journal.ppat.1007187

Epidemiological significance of dengue virus genetic variation in mosquito infection dynamics
Cited by: 39
Author(s): Albin Fontaine, Sébastian Lequime, Isabelle Moltini-Conclois, Davy Jiolle, Isabelle Leparc-Goffart, Robert C. Reiner, Louis Lambrechts
Software Mentions: 6
Published: almost 8 years ago

10.1371/journal.ppat.1007273

Trichuris muris whey acidic protein induces type 2 protective immunity against whipworm
Cited by: 18
Author(s): Neima Briggs, Junfei Wei, Leroy Versteeg, Bin Zhan, Brian Keegan, Ashish Damania, Jeroen Pollet, Kelly S. Hayes, Coreen M. Beaumier, Christopher A. Seid, Jamie Leong, Richard K. Grencis, María Elena Bottazzi, K. Jagannadha Sastry, Peter J. Hotez
Software Mentions: 6
Published: almost 8 years ago

10.3389/fmolb.2020.582911

Comprehensive Analysis of the Relationships Between Tumor Mutation Burden With Immune Infiltrates in Cervical Cell Carcinoma
Cited by: 9
Author(s): Cankun Zhou, Chaomei Li, Shunqing Peng, Liangcheng Zhou, Huan Li
Software Mentions: 6
Published: over 5 years ago

10.1002/ece3.6298

Convergent morphological responses to loss of flight in rails (Aves: Rallidae)
Cited by: 8
Author(s): Julien Gaspar, Gillian C. Gibb, Steven A. Trewick
Software Mentions: 6
Published: about 6 years ago

10.3389/fmicb.2019.00164

Comparison of Small Gut and Whole Gut Microbiota of First-Degree Relatives With Adult Celiac Disease Patients and Controls
Cited by: 66
Author(s): Rahul Bodkhe, Sudarshan A. Shetty, Dhiraj Dhotre, Anil K. Verma, Khushbo Bhatia, Abhishek Mishra, Gurvinder Kaur, Pranav Pande, Dhinoth Kumar Bangarusamy, Beena P. Santosh, Rajadurai Chinnasamy Perumal, Vineet Ahuja, Yogesh S. Shouche, Govind Makharia
Software Mentions: 6
Published: over 7 years ago

10.1038/s42003-020-01439-6

Predicting clinical resistance prevalence using sewage metagenomic data
Cited by: 28
Author(s): Antti Karkman, Fanny Berglund, Carl-Fredrik Flach, Erik Kristiansson, D. G. Joakim Larsson
Software Mentions: 6
Published: over 5 years ago

10.1186/s12859-020-03648-6

A computational framework for modeling and studying pertussis epidemiology and vaccination
Cited by: 4
Author(s): Paolo Castagno, Simone Pernice, Gianni Ghetti, Massimiliano Povero, Lorenzo Pradelli, Daniela Paolotti, Gianfranco Balbo, Matteo Sereno, Marco Beccuti
Software Mentions: 6
Published: almost 6 years ago

10.1242/jeb.242168

Limited heat tolerance in a cold-adapted seabird: implications of a warming Arctic
Cited by: 18
Author(s): Emily S. Choy, Ryan S. O’Connor, H. Grant Gilchrist, Anna L. Hargreaves, Oliver P. Love, François Vézina, Kyle H. Elliott
Software Mentions: 6
Published: almost 5 years ago

10.1371/journal.pone.0184890

Effects of Eimeria tenella infection on chicken caecal microbiome diversity, exploring variation associated with severity of pathology
Cited by: 92
Author(s): Sarah E. Macdonald, Matthew J. Nolan, Kimberley Harman, Kay Boulton, David Hume, Fiona M. Tomley, Richard A. Stabler, Damer P. Blake
Software Mentions: 6
Published: almost 9 years ago

10.1093/jxb/erx018

Genome-wide association study unravels the genetic control of the apple volatilome and its interplay with fruit texture
Cited by: 50
Author(s): Brian Farneti, Mario Di Guardo, Iuliia Khomenko, Luca Cappellin, Franco Biasioli, Riccardo Velasco, Fabrizio Costa
Software Mentions: 6
Published: over 9 years ago

10.1371/journal.pone.0205291

CytoBinning: Immunological insights from multi-dimensional data
Cited by: 1
Author(s): Yang Shen, Benjamin Chaigne-Delalande, Richard W. Lee, Wolfgang Losert
Software Mentions: 6
Published: over 7 years ago

10.1038/s41598-017-10930-w

Human hepatic gene expression signature of non-alcoholic fatty liver disease progression, a meta-analysis
Cited by: 69
Author(s): Maria Ryaboshapkina, Mårten Hammar
Software Mentions: 6
Published: over 8 years ago

10.1371/journal.ppat.1003450

Novel Immunomodulators from Hard Ticks Selectively Reprogramme Human Dendritic Cell Responses
Cited by: 64
Author(s): Stephen G. Preston, Juraj Majtán, Chrisoula Kouremenou, Oliwia Ryśnik, Lena Fatou Burger, Alejandro Cabezas-Cruz, Maylin Chiong Guzman, Miles A. Nunn, Guido C. Paesen, Patricia A. Nuttall, Jonathan M. Austyn
Software Mentions: 6
Published: almost 13 years ago

10.1186/s13062-017-0193-2

On the global CRISPR array behavior in class I systems
Cited by: 11
Author(s): Alice Toms, Rodolphe Barrangou
Software Mentions: 6
Published: almost 9 years ago

10.1371/journal.pone.0198664

Migrations and habitat use of the smooth hammerhead shark (Sphyrna zygaena) in the Atlantic Ocean
Cited by: 17
Author(s): Catarina C. Santos, Rui Coelho
Software Mentions: 6
Published: about 8 years ago

10.1038/s42003-021-02044-x

Cooperative root graft networks benefit mangrove trees under stress
Cited by: 2
Author(s): Alejandra G. Vovides, Marie-Christin Wimmler, Flalk Schrewe, Thorsten Balke, Martin Zwanzig, Cyril Piou, Étienne Delay, Jorge López‐Portillo, Uta Berger
Software Mentions: 6
Published: about 5 years ago

10.3390/biology10060502

Characterization of Tumor-Associated Macrophages and the Immune Microenvironment in Limited-Stage Neuroendocrine-High and -Low Small Cell Lung Cancer
Cited by: 22
Author(s): Dávid Dóra, Christopher J. Rivard, Hui Yu, Shivaun Lueke Pickard, Viktória László, Tünde Harkó, Zsolt Megyesfalvi, Elek Dinya, Csongor Gerdán, Gábor Szegvári, Fred R. Hirsch, Balázs Döme, Zoltán Lohinai
Software Mentions: 6
Published: about 5 years ago

10.3390/ani11030625

RNA-Seq Implies Divergent Regulation Patterns of LincRNA on Spermatogenesis and Testis Growth in Goats
Cited by: 6
Author(s): Dongdong Bo, Xunping Jiang, Guiqiong Liu, Ronggui Hu, Yuqing Chong
Software Mentions: 6
Published: over 5 years ago

10.3389/fgene.2020.606222

Agricultural Landscape Heterogeneity Matter: Responses of Neutral Genetic Diversity and Adaptive Traits in a Neotropical Savanna Tree
Cited by: 5
Author(s): Tatiana Souza do Amaral, Juliana Silveira dos Santos, Fernanda Fraga Rosa, Marcelo Bruno Pessôa, Lázaro José Chaves, Milton Cézar Ribeiro, Rosane Garcia Collevatti
Software Mentions: 6
Published: over 5 years ago

10.1038/s42003-021-02012-5

High and specific diversity of protists in the deep-sea basins dominated by diplonemids, kinetoplastids, ciliates and foraminiferans
Cited by: 22
Author(s): Alexandra Schoenle, Manon Hohlfeld, Karoline Hermanns, Frédéric Mahé, Colomban de Vargas, Frank Nitsche, Hartmut Arndt
Software Mentions: 6
Published: about 5 years ago

10.3390/plants10071460

Novel Metrics to Characterize In Vitro Pollen Tube Growth Performance of Apple Cultivars
Cited by: 1
Author(s): Stefan Roeder, Sara Serra, Stefano Musacchi
Software Mentions: 6
Published: almost 5 years ago

10.3390/biology10090861

Thermal and Oxygen Flight Sensitivity in Ageing Drosophila melanogaster Flies: Links to Rapamycin-Induced Cell Size Changes
Cited by: 6
Author(s): Ewa Szlachcic, Marcin Czarnołęski
Software Mentions: 6
Published: almost 5 years ago

10.1371/journal.ppat.1006967

KSHV induces immunoglobulin rearrangements in mature B lymphocytes
Cited by: 28
Author(s): Jennifer Totonchy, Jessica M. Osborn, Amy Chadburn, Romina Nabiee, Lissenya B. Argueta, Geoffrey Mikita, Ethel Cesarman
Software Mentions: 6
Published: about 8 years ago

10.1080/21655979.2020.1840731

Bioinformatics analysis to screen key prognostic genes in the breast cancer tumor microenvironment
Cited by: 9
Author(s): Qian Ye, Xiaofei Han, Zhengsheng Wu
Software Mentions: 6
Published: over 6 years ago

10.3390/plants10061123

Genome-Wide Association Analysis for Stem Cross Section Properties, Height and Heading Date in a Collection of Spanish Durum Wheat Landraces
Cited by: 9
Author(s): Carmen M. Ávila, María Dolores Requena-Ramírez, Cristina Rodríguez-Suárez, Fernando Flores, Josefina C. Sillero, Sergio G. Atienza
Software Mentions: 6
Published: about 5 years ago

10.3389/fmicb.2021.614634

Terrestrial Inputs Shape Coastal Bacterial and Archaeal Communities in a High Arctic Fjord (Isfjorden, Svalbard)
Cited by: 14
Author(s): Lisa-Marie Delpech, Tobias R. Vonnahme, Maeve McGovern, Rolf Gradinger, Kim Præbel, Amanda Poste
Software Mentions: 6
Published: over 5 years ago

10.1038/s41598-017-12621-y

Reconstructing human population history from dental phenotypes
Cited by: 44
Author(s): Hannes Rathmann, Hugo Reyes-Centeno, Silvia Ghirotto, Nicole Creanza, Tsunehiko Hanihara, Katerina Harvati
Software Mentions: 6
Published: over 8 years ago

10.1186/s13007-021-00734-5

Association of spectroscopically determined leaf nutrition related traits and breeding selection in Sassafras tzumu
Cited by: 1
Author(s): Jun Liu, Yang Sun, Wenjian Liu, Zifeng Tan, Jingmin Jiang, Yanjie Li
Software Mentions: 6
Published: about 5 years ago

10.1038/s42003-019-0572-6

pathCHEMO, a generalizable computational framework uncovers molecular pathways of chemoresistance in lung adenocarcinoma
Cited by: 7
Author(s): Nusrat J Epsi, Sukanya Panja, Sharon R. Pine, Antonina Mitrofanova
Software Mentions: 6
Published: almost 7 years ago

10.3897/BDJ.9.e67318

Data Descriptor: Pacific Introduced Flora (PaciFLora)
Cited by: 1
Author(s): Michael R. Wohlwend, Dylan Craven, Patrick Weigelt, Hanno Seebens, Marten Winter, Holger Kreft, Wayne Dawson, Franz Essl, Mark van Kleunen, Jan Pergl, Petr Pyšek, Philip Thomas, Tiffany M. Knight
Software Mentions: 6
Published: almost 5 years ago

10.1111/tpj.14184

An updated gene atlas for maize reveals organ‐specific and stress‐induced genes
Cited by: 91
Author(s): Genevieve M. Hoopes, John Hamilton, Joshua C. Wood, Eddi Esteban, Asher Pasha, Brieanne Vaillancourt, Nicholas J. Provart, C. Robin Buell
Software Mentions: 6
Published: over 7 years ago

10.18632/aging.103168

Gut microbiota and metabolite alterations associated with reduced bone mineral density or bone metabolic indexes in postmenopausal osteoporosis
Cited by: 103
Author(s): Jianquan He, Shuaimei Xu, Bangzhou Zhang, Chuanxing Xiao, Zhangran Chen, Fuyou Si, Jifan Fu, Xiaobo Lin, Guohua Zheng, Guangchuang Yu, Jian Chen
Software Mentions: 6
Published: about 6 years ago

10.1007/s10886-020-01148-8

Phloem Metabolites of Prunus Sp. Rather than Infection with Candidatus Phytoplasma Prunorum Influence Feeding Behavior of Cacopsylla pruni Nymphs
Cited by: 9
Author(s): Jannicke Gallinger, Jürgen Gross
Software Mentions: 6
Published: over 6 years ago

10.1371/journal.ppat.1008179

Molecular dating and viral load growth rates suggested that the eclipse phase lasted about a week in HIV-1 infected adults in East Africa and Thailand
Cited by: 24
Author(s): Morgane Rolland, Sodsai Tovanabutra, Bethany L. Dearlove, Yifan Li, Christopher L. Owen, Éric Lewitus, Eric Sanders‐Buell, Meera Bose, Anne Marie O’Sullivan, Raabya Rossenkhan, Jan Phillipus Lourens Labuschagne, Paul T. Edlefsen, Daniel B. Reeves, Gustavo H. Kijak, Shana Miller, Kultida Poltavee, Jenica Lee, Lydia Bonar, Elizabeth A. Harbolick, Bahar Ahani, Phuc Pham, Hannah Kibuuka, Lucas Maganga, Sorachai Nitayaphan, Fred Sawe, Leigh Anne Eller, Robert A. Gramzinski, Jerome H. Kim, Nelson L. Michael, Merlin L. Robb
Software Mentions: 6
Published: over 6 years ago

10.1002/pld3.284

Maize brace roots provide stalk anchorage
Cited by: 21
Author(s): Jonathan W Reneau, Rajdeep S. Khangura, Adam Stager, Lindsay Erndwein, Teclemariam Weldekidan, Douglas D. Cook, Brian P. Dilkes, Erin E. Sparks
Software Mentions: 6
Published: over 5 years ago

10.1111/pce.13188

Global spatial analysis of Arabidopsis natural variants implicates 5′UTR splicing ofLATE ELONGATED HYPOCOTYLin responses to temperature
Cited by: 11
Author(s): Allan B. James, Stuart Sullivan, Hugh G. Nimmo
Software Mentions: 6
Published: about 8 years ago

10.1111/pbi.12834

Conversion of array‐based single nucleotide polymorphic markers for use in targeted genotyping by sequencing in hexaploid wheat (Triticum aestivum)
Cited by: 21
Author(s): Amanda Burridge, Paul Wilkinson, Mark Winfield, Gary Barker, Alexandra M. Allen, Jane A. Coghill, Christy Waterfall, Keith J. Edwards
Software Mentions: 6
Published: over 8 years ago

10.3389/fmicb.2021.675693

Nitrogen Fertilization and Native C4 Grass Species Alter Abundance, Activity, and Diversity of Soil Diazotrophic Communities
Cited by: 10
Author(s): Jialin Hu, Jonathan D. Richwine, Patrick D. Keyser, Lidong Li, Fei Yao, Sindhu Jagadamma, Jennifer M. DeBruyn
Software Mentions: 6
Published: almost 5 years ago

10.1001/jamanetworkopen.2021.5723

Preconception Thyrotropin Levels and Risk of Adverse Pregnancy Outcomes in Chinese Women Aged 20 to 49 Years
Cited by: 13
Author(s): Ying Yang, Tonglei Guo, Jinrong Fu, Jian Kuang, Yuanyuan Wang, Zhang Ya, Honggang Zhang, Yuan He, Zuoqi Peng, Qiaomei Wang, Haiping Shen, Yiping Zhang, Donghai Yan, Xu Ma, Haixia Guan
Software Mentions: 6
Published: about 5 years ago

10.1093/beheco/ary012

Social interactions predict genetic diversification: an experimental manipulation in shorebirds
Cited by: 4
Author(s): Charles Cunningham, Jorge Parra, Lucy Coals, Lucila Marcela Beltrán-Tolosa, Sama Zefania, Tamás Székely
Software Mentions: 6
Published: over 8 years ago

10.3389/fmicb.2021.724980

Appendectomy Is Associated With Alteration of Human Gut Bacterial and Fungal Communities
Cited by: 16
Author(s): Shanshan Cai, Yanyun Fan, Bangzhou Zhang, J. H. Lin, Xiaomin Yang, Yunpeng Liu, Jingjing Liu, Jianlin Ren, Hui Xu
Software Mentions: 6
Published: almost 5 years ago

10.3390/insects12070631

Endophytic Isaria javanica pf185 Persists after Spraying and Controls Myzus persicae (Hemiptera: Aphididae) and Colletotrichum acutatum (Glomerellales: Glomerellaceae) in Pepper
Cited by: 2
Author(s): Roland Bocco, Moran Lee, Dayeon Kim, Sangwoo Ahn, Jin-Woo Park, Sang-Yeob Lee, Jihee Han
Software Mentions: 6
Published: almost 5 years ago

10.1098/rstb.2019.0255

Dormancy dynamics and dispersal contribute to soil microbiome resilience
Cited by: 34
Author(s): Jackson W Sorensen, Ashley Shade
Software Mentions: 6
Published: over 6 years ago

10.1093/icb/icaa138

Epigenetics of Animal Personality: DNA Methylation Cannot Explain the Heritability of Exploratory Behavior in a Songbird
Cited by: 11
Author(s): Kees van Oers, Bernice Sepers, William Sies, Fleur Gawehns, Koen Verhoeven, Veronika N. Laine
Software Mentions: 6
Published: over 5 years ago

10.1038/s41598-017-15554-8

Microbial Diversity of Genital Ulcers of HSV-2 Seropositive Women
Cited by: 7
Author(s): Supriya D. Mehta, Ashish Pradhan, Stefan J. Green, Ankur Naqib, Elijah Odoyo-June, Charlotte A. Gaydos, Sheila M. Barry, Alan Landay, Robert C. Bailey
Software Mentions: 6
Published: over 8 years ago

10.1186/s41235-019-0164-5

The spatial allocation of attention in an interactive environment
Cited by: 2
Author(s): Katherine Wood, Daniel J. Simons
Software Mentions: 6
Published: about 7 years ago

10.3390/ph14020115

Simulation-Based Assessment of the Impact of Non-Adherence on Endoxifen Target Attainment in Different Tamoxifen Dosing Strategies
Cited by: 4
Author(s): Anna Mueller‐Schoell, Lena Klopp‐Schulze, Robin Michelet, Madelé van Dyk, Thomas E. Mürdter, Matthias Schwab, Markus Joerger, Wilhelm Huisinga, Gerd Mikus, Charlotte Kloft
Software Mentions: 6
Published: over 5 years ago

10.1002/ctm2.156

A three‐lncRNA signature of pretreatment biopsies predicts pathological response and outcome in esophageal squamous cell carcinoma with neoadjuvant chemoradiotherapy
Cited by: 17
Author(s): Chaoqi Zhang, Zhihui Zhang, Guochao Zhang, Liyan Xue, Haijun Yang, Yuejun Luo, Xiaoli Zheng, Yonglei Zhang, Yufen Yuan, Ruixue Lei, Zhaoyang Yang, Bo Zheng, Zhen Zhang, Le Wang, Yun Cao, Sihui Wang, Feng Wang, Lingling Fang, Qingpeng Zeng, Jiagen Li, Shugeng Gao, Qi Xue, Nan Sun, Jie He
Software Mentions: 6
Published: almost 6 years ago

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Papers Mentioning ggplot2 11,441