Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1038/s41598-019-50839-0
https://doi.org/10.1038/s41598-019-50839-0
Understanding the phyllosphere microbiome assemblage in grape species (Vitaceae) with amplicon sequence data structures
Cited by: 36
Author(s): Prashant Singh, Sylvain Santoni, Audrey Weber, Patrice This, Jean‐Pierre Péros
Published: almost 5 years ago
Software Mentions 6
bioconductor: dada2
Accurate, high-resolution sample inference from amplicon sequencing dataPapers that mentioned: 274
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: metagenomeSeq
Statistical analysis for sparse high-throughput sequencingPapers that mentioned: 169
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census dataPapers that mentioned: 1,702
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of GraphicsPapers that mentioned: 11,441