Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7554/eLife.30952

https://doi.org/10.7554/eLife.30952

Cited by: 158
Author(s): Inge Kühl, María Miranda, Ilian Atanassov, Irina Kuznetsova, Yvonne Hinze, Arnaud Mourier, Aleksandra Filipovska, Nils‐Göran Larsson
Published: over 6 years ago

Software Mentions 7

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: UniProt.ws
R Interface to UniProt Web Services
Papers that mentioned: 10
cran: Andromeda
Asynchronous Disk-Based Representation of Massive Data
Papers that mentioned: 1,724
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: pheatmap
Pretty Heatmaps
Papers that mentioned: 2,572
cran: seqinr
Biological Sequences Retrieval and Analysis
Papers that mentioned: 110