Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-018-1407-3

https://doi.org/10.1186/s13059-018-1407-3

Quartz-Seq2: a high-throughput single-cell RNA-sequencing method that effectively uses limited sequence reads

Cited by: 90
Author(s): Yohei Sasagawa, Hiroki Danno, Hitomi Takada, Masashi Ebisawa, Kaori Tanaka, Tetsutaro Hayashi, Akira Kurisaki, Itoshi Nikaido
Published: almost 7 years ago

Software Mentions 6

bioconductor: DNABarcodes
A tool for creating and analysing DNA barcodes used in Next Generation Sequencing multiplexing experiments
Papers that mentioned: 3
bioconductor: ReactomePA
Reactome Pathway Analysis
Papers that mentioned: 171
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: PypeR
A python interface to R lanugage
Papers that mentioned: 2
pypi: seqtk
seqtk provides various tools for Sequence.
Papers that mentioned: 213