Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-014-0459-2

https://doi.org/10.1186/s13059-014-0459-2

Genome analysis of a major urban malaria vector mosquito, Anopheles stephensi

Cited by: 106
Author(s): Xiaofang Jiang, Ashley Peery, Andrew Brantley Hall, Atashi Sharma, Xiaoguang Chen, Robert M. Waterhouse, Aleksey Komissarov, Michelle M. Riehle, Yogesh S. Shouche, Maria V. Sharakhova, Daniel Lawson, Nazzy Pakpour, Peter Arensburger, Victoria L M Davidson, Karin Eiglmeier, Scott J. Emrich, Phillip George, Ryan Kennedy, Shrinivasrao P. Mane, G. Maslen, Chioma Oringanje, Yumin Qi, Robert E. Settlage, Marta Tojo, José M. C. Tubío, Maria Unger, Bo Wang, Kenneth D. Vernick, José M. C. Ribeiro, Anthony A. James, Kristin Michel, Michael A. Riehle, Shirley Luckhart, Igor V. Sharakhov, Zhijian Tu
Published: about 10 years ago

Software Mentions 6

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: genoPlotR
Plot Publication-Grade Gene and Genome Maps
Papers that mentioned: 96
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: hive
Hadoop InteractiVE
Papers that mentioned: 2
cran: MBCluster.Seq
Model-Based Clustering for RNA-seq Data
Papers that mentioned: 8
pypi: hive
Papers that mentioned: 2