Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1371/journal.pone.0227434
https://doi.org/10.1371/journal.pone.0227434
Comparing bioinformatic pipelines for microbial 16S rRNA amplicon sequencing
Cited by: 237
Author(s): Andrei Prodan, Valentina Tremaroli, Harald Brolin, Aeilko H. Zwinderman, Max Nieuwdorp, Evgeni Levin
Published: over 4 years ago
Software Mentions 7
bioconductor: dada2
Accurate, high-resolution sample inference from amplicon sequencing dataPapers that mentioned: 274
bioconductor: phyloseq
Handling and analysis of high-throughput microbiome census dataPapers that mentioned: 1,702
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of GraphicsPapers that mentioned: 11,441
cran: stringdist
Approximate String Matching, Fuzzy Text Search, and String Distance FunctionsPapers that mentioned: 18
pypi: py
library with cross-python path, ini-parsing, io, code, log facilitiesPapers that mentioned: 403