10.1371/journal.pone.0211196
Myopia is associated with education: Results from NHANES 1999-2008Cited by: 31
Author(s): Stefan Nickels, Susanne Hopf, Norbert Pfeiffer, Alexander K. Schuster
Software Mentions: 8
Published: over 7 years ago
10.1002/cam4.2925
Postoperative adjuvant therapy following radical resection for intrahepatic cholangiocarcinoma: A multicenter retrospective studyCited by: 14
Author(s): Lei Wang, Manjun Deng, Jianying Lou, Shi Zheng, Xinyu Bi, Jianming Wang, Wei Guo, Fuyu Li, Jian Wang, Yang Zheng, Jingdong Li, Sheue-yann Cheng, Weiping Zhou, Yongyi Zeng
Software Mentions: 8
Published: over 6 years ago
10.18632/oncotarget.24506
Systematic characterization of autophagy-related genes during the adipocyte differentiation using public-access dataCited by: 13
Author(s): Mahmoud Ahmed, Huynh Quoc Nguyen, Jin Seok Hwang, Sahib Zada, Trang Huyen Lai, Sang Soo Kang, Deok Ryong Kim
Software Mentions: 8
Published: over 8 years ago
10.1186/1471-2105-14-179
Modelling and visualizing fine-scale linkage disequilibrium structureCited by: 3
Author(s): D.J. Edwards
Software Mentions: 8
Published: about 13 years ago
10.1093/bioinformatics/btx738
PlanNET: homology-based predicted interactome for multiple planarian transcriptomesCited by: 17
Author(s): Sergio Castillo-Lara, Josep F. Abril
Software Mentions: 8
Published: over 8 years ago
10.3389/fpls.2019.00382
The Potential of Liming to Improve Drought Tolerance of Norway Spruce [Picea abies (L.) Karst.]Cited by: 6
Author(s): M. Köhler, Jörg Kunz, Johannes Herrmann, Peter Hartmann, Lelde Jansone, Heike Puhlmann, Klaus von Wilpert, Jürgen Bauhus
Software Mentions: 8
Published: about 7 years ago
10.7554/eLife.44036
Neuroblast-specific open chromatin allows the temporal transcription factor, Hunchback, to bind neuroblast-specific lociCited by: 38
Author(s): Sonia Sen, Sachin Chanchani, Tony D. Southall, Chris Q. Doe
Software Mentions: 8
Published: over 7 years ago
10.1186/s12859-019-3145-2
MoMI-G: modular multi-scale integrated genome graph browserCited by: 20
Author(s): Toshiyuki Yokoyama, Yoshitaka Sakamoto, Masahide Seki, Yutaka Suzuki, Masahiro Kasahara
Software Mentions: 8
Published: over 6 years ago
10.1038/s41598-020-75541-4
Stromal microenvironment promoted infiltration in esophageal adenocarcinoma and squamous cell carcinoma: a multi-cohort gene-based analysisCited by: 6
Author(s): Jiali Li, Zhao-Yi Zeng, Xueping Jiang, Nannan Zhang, Yanping Gao, Yuan Luo, Wenjie Sun, Shuying Li, Jiangbo Ren, Yan Gong, Conghua Xie
Software Mentions: 8
Published: over 5 years ago
10.3389/fcell.2021.677697
Single-Cell RNA-Sequencing Portraying Functional Diversity and Clinical Implications of IFI6 in Ovarian CancerCited by: 7
Author(s): Hongyu Zhao, Zhefeng Li, Yan Gao, Jie Li, Xiaoting Zhao, Wentao Yue
Software Mentions: 8
Published: almost 5 years ago
10.1002/cam4.3350
Individualized prediction of survival benefits from perioperative chemoradiotherapy for patients with resectable gastric cancerCited by: 2
Author(s): Keying Che, Fangcen Liu, Nan Wu, Liu Q, Ling Yuan, Jia Wei
Software Mentions: 8
Published: almost 6 years ago
10.1371/journal.pone.0242730
A comparison of penalised regression methods for informing the selection of predictive markersCited by: 14
Author(s): Christopher J Greenwood, George J. Youssef, Primrose Letcher, Jacqui A. Macdonald, Lauryn Hagg, Ann Sanson, Jennifer McIntosh, Delyse Hutchinson, John W. Toumbourou, Matthew Fuller‐Tyszkiewicz, Craig A. Olsson
Software Mentions: 8
Published: over 5 years ago
10.1371/journal.pone.0221167
Reconstructing systematic persistent impacts of promotional marketing with empirical nonlinear dynamicsCited by: 6
Author(s): Ray Huffaker, Andrew Fearne
Software Mentions: 8
Published: almost 7 years ago
10.3389/fimmu.2021.649551
TSPAN1, TMPRSS4, SDR16C5, and CTSE as Novel Panel for Pancreatic Cancer: A Bioinformatics Analysis and Experiments ValidationCited by: 11
Author(s): Yi-Jun Hua, Tiandong Li, Hua Wang, Jinyu Wu, Chuncheng Yi, Jianxiang Shi, Peng Wang, Chunhua Song, Liping Dai, Guozhong Jiang, Yuguang Huang, Yu Ye, Jitian Li
Software Mentions: 8
Published: over 5 years ago
10.1017/S0950268821001801
Spatial analysis of the incidence of Dengue, Zika and Chikungunya and socioeconomic determinants in the city of Rio de Janeiro, BrazilCited by: 6
Author(s): Eny Regina da Silva Queiroz, Roberto de Andrade Medronho
Software Mentions: 8
Published: over 5 years ago
10.1038/s41598-019-52241-2
Tradeoffs in the value of biodiversity feature and cost data in conservation prioritizationCited by: 11
Author(s): Amanda D. Rodewald, Matthew Strimas‐Mackey, Richard Schuster, Peter Arcese
Software Mentions: 8
Published: over 6 years ago
10.3390/s20226666
Blood Stain Classification with Hyperspectral Imaging and Deep Neural NetworksCited by: 18
Author(s): Kamil Książek, Michał Romaszewski, Przemysław Głomb, Bartosz Grabowski, Michał Cholewa
Software Mentions: 8
Published: over 5 years ago
10.7554/eLife.58331
An essential role for MEF2C in the cortical response to loss of sleep in miceCited by: 19
Author(s): Theresa E. Bjorness, Ashwinikumar Kulkarni, Volodymyr Rybalchenko, Ayako Suzuki, Catherine Bridges, Adam J. Harrington, Christopher W. Cowan, Joseph S. Takahashi, Genevieve Konopka, Robert Greene
Software Mentions: 8
Published: almost 6 years ago
10.1136/jitc-2020-000588
Monocyte-derived APCs are central to the response of PD1 checkpoint blockade and provide a therapeutic target for combination therapyCited by: 30
Author(s): Sjoerd Schetters, Elizabeth Rodríguez, Laura Kruijssen, Matheus H.W. Crommentuijn, Louis Boon, Jan Van den Bossche, Joke M. M. den Haan, Yvette van Kooyk
Software Mentions: 8
Published: almost 6 years ago
10.1038/s41375-020-01096-y
Copy number evolution and its relationship with patient outcome—an analysis of 178 matched presentation-relapse tumor pairs from the Myeloma XI trialCited by: 21
Author(s): James Croft, Sidra Ellis, Amy L. Sherborne, Kim A. Sharp, Amy Price, Matthew Jenner, Mark T. Drayson, Roger G. Owen, Sally Chown, Jindriska Lindsay, Kamaraj Karunanithi, Hannah Hunter, Walter M. Gregory, Faith E. Davies, Gareth J. Morgan, Gordon Cook, Lilit Atanesyan, Suvi Savola, David A. Cairns, Graham Jackson, Richard S. Houlston, Martin Kaiser
Software Mentions: 8
Published: over 5 years ago
10.1186/s12859-021-04123-6
The prognostic value of an autophagy-related lncRNA signature in hepatocellular carcinomaCited by: 19
Author(s): Shiming Yang, Yaping Zhou, Xiangxin Zhang, Lu Wang, Jianfeng Fu, Xiaotong Zhao, Yang Liu
Software Mentions: 8
Published: about 5 years ago
10.1038/s41396-018-0279-6
Bacterial contributions to delignification and lignocellulose degradation in forest soils with metagenomic and quantitative stable isotope probingCited by: 228
Author(s): Roland C. Wilhelm, Rahul Singh, Lindsay D. Eltis, William W. Mohn
Software Mentions: 8
Published: almost 8 years ago
10.3390/insects11020073
Influence of Temperature on the Interaction for Resource Utilization between Fall Armyworm, Spodoptera frugiperda (Lepidoptera: Noctuidae), and a Community of Lepidopteran Maize Stemborers LarvaeCited by: 15
Author(s): Bonoukpoè Mawuko Sokame, François Rebaudo, Peter Malusi, Sevgan Subramanian, Dora Kilalo, Gérald Juma, Paul‐André Calatayud
Software Mentions: 8
Published: over 6 years ago
10.3389/fonc.2020.568469
Aberrant RNA Splicing Events Driven by Mutations of RNA-Binding Proteins as Indicators for Skin Cutaneous Melanoma PrognosisCited by: 4
Author(s): Chao Mei, Pei-Yuan Song, Wei Zhang, Hong‐Hao Zhou, Xi Li, Zhao‐Qian Liu
Software Mentions: 8
Published: over 5 years ago
10.3390/cells9030786
Systematic Identification of Housekeeping Genes Possibly Used as References in Caenorhabditis elegans by Large-Scale Data IntegrationCited by: 13
Author(s): Jingxin Tao, Youjin Hao, Xudong Li, Huachun Yin, Xiner Nie, Jie Zhang, Bo-Ying Xu, Chen Qiao, Bo Li
Software Mentions: 8
Published: over 6 years ago
10.1155/2021/9920234
Bioinformatic Analysis Reveals Central Role for Tumor-Infiltrating Immune Cells in Uveal Melanoma ProgressionCited by: 6
Author(s): Mieszko Lachota, Anton Lennikov, Karl‐Johan Malmberg, Radosław Zagożdżon
Software Mentions: 8
Published: about 5 years ago
10.12688/f1000research.21642.2
Generalized EmbedSOM on quadtree-structured self-organizing mapsCited by: 3
Author(s): Miroslav Kratochvíl, Abhishek Koladiya, Jiřı́ Vondrášek
Software Mentions: 8
Published: about 6 years ago
10.3390/ijms22168742
Inhibition of WHSC1 Allows for Reprogramming of the Immune Compartment in Prostate CancerCited by: 5
Author(s): Muzamil Y. Want, Ellen Karasik, Bryan M. Gillard, AJ Robert McGray, Sebastiano Battaglia
Software Mentions: 8
Published: almost 5 years ago
10.1128/mBio.01018-16
Looking for a Signal in the Noise: Revisiting Obesity and the MicrobiomeCited by: 396
Author(s): Marc A. Sze, Patrick D. Schloss
Software Mentions: 8
Published: almost 10 years ago
10.1016/j.devcel.2018.07.005
Transcriptional Convergence of Oligodendrocyte Lineage Progenitors during DevelopmentCited by: 184
Author(s): Sueli Marques, David van Bruggen, Darya Vanichkina, Elisa M. Floriddia, Hermany Munguba, Leif Väremo, Stefania Giacomello, Ana Mendanha Falcão, Mandy Meijer, Åsa K. Björklund, Jens Hjerling-Leffler, Ryan J. Taft, Gonçalo Castelo‐Branco
Software Mentions: 8
Published: almost 8 years ago
10.1371/journal.pgen.1008515
Dynamic and regulated TAF gene expression during mouse embryonic germ cell developmentCited by: 15
Author(s): Megan A. Gura, Maria M. Mikedis, Kimberly A. Seymour, Dirk G. de Rooij, David C. Page, Richard N. Freiman
Software Mentions: 8
Published: over 6 years ago
10.1186/s40168-019-0630-9
Environmental filtering drives distinct continental atlases of soil archaea between dryland and wetland agricultural ecosystemsCited by: 103
Author(s): Shuo Jiao, Ye Xu, Jie Zhang, Yahai Lu
Software Mentions: 8
Published: over 7 years ago
10.3389/fimmu.2017.00690
Changes in Host Immune–Endocrine Relationships during Tuberculosis Treatment in Patients with Cured and Failed Treatment OutcomesCited by: 7
Author(s): Léanie Kleynhans, Sheena Ruzive, Lizaan Ehlers, Lani Thiart, Novel N. Chegou, Magda Conradie, Magdalena Kriel, Kim Stanley, Gian D. van der Spuy, Martin Kidd, Paul D. van Helden, Gerhard Walzl, Katharina Ronacher
Software Mentions: 8
Published: about 9 years ago
10.3389/fmicb.2021.627437
A Taxon-Wise Insight Into Rock Weathering and Nitrogen Fixation Functional Profiles of Proglacial SystemsCited by: 4
Author(s): Gilda Varliero, Alexandre M. Anesio, Gary Barker
Software Mentions: 8
Published: almost 5 years ago
10.1371/journal.pgen.1006883
Systematic identification and characterization of regulatory elements derived from human endogenous retrovirusesCited by: 108
Author(s): Jumpei Ito, Ryota Sugimoto, Hirofumi Nakaoka, Shiro Yamada, Tetsuaki Kimura, Takahide Hayano, Ituro Inoue
Software Mentions: 8
Published: almost 9 years ago
10.3389/fcell.2021.642650
A Novel CpG Methylation Risk Indicator for Predicting Prognosis in Bladder CancerCited by: 9
Author(s): Yufeng Guo, Jun Yin, Yuanheng Dai, Yu-Dong Guan, Pinjin Chen, Yongqiang Chen, Chen‐Zheng Huang, Yong‐Jie Lu, Lirong Zhang, Dae‐Kyu Song
Software Mentions: 8
Published: almost 5 years ago
10.1098/rstb.2018.0335
Mosquito and primate ecology predict human risk of yellow fever virus spillover in BrazilCited by: 41
Author(s): Marissa L. Childs, Nicole Nova, Justine Colvin, Erin A. Mordecai
Software Mentions: 8
Published: almost 7 years ago
10.3389/fonc.2021.561763
Predict Colon Cancer by Pairing Plasma miRNAs: Establishment of a Normalizer-Free, Cross-Platform ModelCited by: 3
Author(s): Dashan Qin, Qingdong Guo, Rui Wei, Si Liu, Shoumin Zhu, Shutian Zhang, Li Min
Software Mentions: 8
Published: about 5 years ago
10.1002/ece3.4387
Toward an ecoregion scale evaluation of <scp>eDNA</scp> metabarcoding primers: A case study for the freshwater fish biodiversity of the Murray–Darling Basin (Australia)Cited by: 69
Author(s): Jonas Bylemans, Dianne Gleeson, Christopher M. Hardy, Elise M. Furlan
Software Mentions: 8
Published: almost 8 years ago
10.1186/s12859-017-1580-5
A fast and efficient python library for interfacing with the Biological Magnetic Resonance Data BankCited by: 8
Author(s): Andrey Smelter, Morgan Astra, Hunter N. B. Moseley
Software Mentions: 8
Published: over 9 years ago
10.1038/s41598-019-43716-3
Long-term field comparison of multiple low-cost particulate matter sensors in an outdoor urban environmentCited by: 146
Author(s): Florentin M. J. Bulot, Steven J. Johnston, Philip J. Basford, Natasha H. C. Easton, Mihaela Apetroaie-Cristea, Gavin L. Foster, Andrew Morris, Simon J. Cox, Matthew Loxham
Software Mentions: 8
Published: about 7 years ago
10.1002/ece3.7269
3D genital shape complexity in female marine mammalsCited by: 15
Author(s): Dara N. Orbach, Charlotte A. Brassey, James Gardiner, Patricia L. R. Brennan
Software Mentions: 8
Published: over 5 years ago
10.1038/s41598-021-85680-x
A 14-gene gemcitabine resistance gene signature is significantly associated with the prognosis of pancreatic cancer patientsCited by: 9
Author(s): Xing Wei, Xiaochong Zhou, Yun Zhao, Yao He, Zhen Weng, Chunfang Xu
Software Mentions: 8
Published: over 5 years ago
10.1245/s10434-020-09552-w
Development and Validation of a Nomogram Prognostic Model for Resected Limited-Stage Small Cell Lung Cancer PatientsCited by: 12
Author(s): Qingpeng Zeng, Jiagen Li, Fengwei Tan, Nan Sun, Yousheng Mao, Yushun Gao, Qi Xue, Shugeng Gao, Jun Zhao, Jie He
Software Mentions: 8
Published: over 5 years ago
10.1038/s41598-021-83888-5
A novel approach for microRNA in situ hybridization using locked nucleic acid probesCited by: 6
Author(s): Isabella Worlewenut Paulsen, Micheal Bzorek, John Elmerdahl Olsen, Birgitte Grum-Schwensen, Jesper T. Troelsen, Ole Birger Pedersen
Software Mentions: 8
Published: over 5 years ago
10.3389/fpsyg.2020.579545
When Large-Scale Assessments Meet Data Science: The Big-Fish-Little-Pond Effect in Fourth- and Eighth-Grade Mathematics Across NationsCited by: 4
Author(s): Ze Wang
Software Mentions: 8
Published: over 5 years ago
10.3390/jcm10010111
Evaluating the Effect of Topical Atropine Use for Myopia Control on Intraocular Pressure by Using Machine LearningCited by: 19
Author(s): Tzu-En Wu, Hsin‐An Chen, Mao-Jhen Jhou, Yen-Ning Chen, Ting-Jen Chang, Chi-Jie Lu
Software Mentions: 8
Published: over 5 years ago
10.1242/dmm.040444
Next-generation RNA sequencing of FFPE subsections reveals highly conserved stromal reprogramming between canine and human mammary carcinomaCited by: 19
Author(s): Parisa Amini, Sina Nassiri, Julia Ettlin, Alexandra Malbon, Enni Markkanen
Software Mentions: 8
Published: over 7 years ago
10.7150/ijms.48244
Identification of Key Genes and Pathways in Myeloma side population cells by Bioinformatics AnalysisCited by: 21
Author(s): Yang Qin, Kaihu Li, Xin Li, Jing Liu
Software Mentions: 8
Published: over 6 years ago
10.3389/fpsyg.2020.579783
A Brief Assessment of Body Image Perception: Norm Values and Factorial Structure of the Short Version of the FKB-20Cited by: 1
Author(s): Ileana Schmalbach, Bjarne Schmalbach, Markus Zenger, Hendrik Berth, Cornelia Albani, Katja Petrowski, Elmar Brähler
Software Mentions: 8
Published: over 5 years ago
10.1186/1471-2105-14-219
TCC: an R package for comparing tag count data with robust normalization strategiesCited by: 394
Author(s): Jianqiang Sun, Tomoaki Nishiyama, Kentaro Shimizu, Koji Kadota
Software Mentions: 8
Published: almost 13 years ago
10.1038/s41380-020-0844-z
Developmental excitation-inhibition imbalance underlying psychoses revealed by single-cell analyses of discordant twins-derived cerebral organoidsCited by: 66
Author(s): Tomoyo Sawada, Thomas E. Chater, Yohei Sasagawa, Mika Yoshimura, Noriko Fujimori-Tonou, Kaori Tanaka, Kynon J.M. Benjamin, Apuã C.M. Paquola, Jennifer A. Erwin, Yukiko Goda, Itoshi Nikaido, Takeshi Kato
Software Mentions: 8
Published: almost 6 years ago
10.1038/s41392-021-00729-7
Technological advances in cancer immunity: from immunogenomics to single-cell analysis and artificial intelligenceCited by: 34
Author(s): Ying Xu, Guan-Hua Su, Ding Ma, Yi Xiao, Zhi-Ming Shao
Software Mentions: 8
Published: almost 5 years ago
10.7717/peerj.7942
A genomic-clinical nomogram predicting recurrence-free survival for patients diagnosed with hepatocellular carcinomaCited by: 6
Author(s): Junjie Kong, Tao Wang, Shu Shen, Zifei Zhang, Xianwei Yang, Wentao Wang
Software Mentions: 8
Published: over 6 years ago
10.1186/s12864-019-5926-4
lncDIFF: a novel quasi-likelihood method for differential expression analysis of non-coding RNACited by: 6
Author(s): Qian Li, Xiaoqing Yu, Ritu Chaudhary, Robbert J.C. Slebos, Christine H. Chung, Xuefeng Wang
Software Mentions: 8
Published: almost 7 years ago
10.3389/fcvm.2020.586871
Predicting Diagnostic Gene Biomarkers Associated With Immune Infiltration in Patients With Acute Myocardial InfarctionCited by: 64
Author(s): Enfa Zhao, Hang Xie, Yushun Zhang
Software Mentions: 8
Published: over 5 years ago
10.34133/2020/3074916
RhizoVision Crown: An Integrated Hardware and Software Platform for Root Crown PhenotypingCited by: 65
Author(s): Anand Seethepalli, Haichao Guo, Xiuwei Liu, Marcus Griffiths, Hussien Almtarfi, Zenglu Li, Shuyu Liu, Alina Zare, Felix B. Fritschi, Elison B. Blancaflor, Xuefeng Ma, Larry M. York
Software Mentions: 8
Published: over 6 years ago
10.15252/msb.202110232
Single‐cell analyses reveal SARS‐CoV‐2 interference with intrinsic immune response in the human gutCited by: 64
Author(s): Sergio Triana, Camila Metz-Zumaran, C. Ramı́rez, Carmon Kee, Patricio Doldan, Mohammed Shahraz, Daniel Schraivogel, Andreas R. Gschwind, Ashwini Kumar Sharma, Lars M. Steinmetz, Carl Herrmann, Theodore Alexandrov, Steeve Boulant, Megan L. Stanifer
Software Mentions: 8
Published: about 5 years ago
10.5696/2156-9614-10.27.200912
Levels of PM10 and PM2.5 and Respiratory Health Impacts on School-Going Children in KenyaCited by: 8
Author(s): Faridah Hussein Were, Godfrey A. Wafula, Cromwel B Lukorito, Timothy Kamanu
Software Mentions: 8
Published: almost 6 years ago
10.3389/fcell.2021.665869
Enhancing Fatty Acid Catabolism of Macrophages Within Aberrant Breast Cancer Tumor Microenvironment Can Re-establish Antitumor FunctionCited by: 4
Author(s): Yucui Gu, Xingjian Niu, Lei Yin, Yiran Wang, Yue Yang, Xudong Yang, Qingyuan Zhang, Hongfei Ji
Software Mentions: 8
Published: about 5 years ago
10.1186/s12859-016-1235-y
BTR: training asynchronous Boolean models using single-cell expression dataCited by: 62
Author(s): Chee Lim, Huange Wang, Steven Woodhouse, Nir Piterman, Lorenz Wernisch, Jasmin Fisher, Berthold Göttgens
Software Mentions: 8
Published: almost 10 years ago
10.1002/1878-0261.12139
Transcription instability in high-risk neuroblastoma is associated with a global perturbation of chromatin domainsCited by: 4
Author(s): Carlo Zanon, Gian Paolo Tonini
Software Mentions: 8
Published: over 8 years ago
10.1186/s13059-019-1664-9
RnBeads 2.0: comprehensive analysis of DNA methylation dataCited by: 188
Author(s): Fabian Müller, Michael Scherer, Yassen Assenov, Pavlo Lutsik, Jörn Walter, Thomas Lengauer, Christoph Bock
Software Mentions: 8
Published: over 7 years ago
10.3389/fpsyg.2021.614470
Determining the Number of Attributes in Cognitive Diagnosis ModelingCited by: 14
Author(s): Pablo Nájera, Francisco Abad, Miguel A. Sorrel
Software Mentions: 8
Published: over 5 years ago
10.1186/1471-2164-15-786
A transcriptome resource for the koala (Phascolarctos cinereus): insights into koala retrovirus transcription and sequence diversityCited by: 47
Author(s): Matthew Hobbs, Ana Pavasovic, Andrew King, Peter J. Prentis, Mark D. B. Eldridge, Zhiliang Chen, Donald J. Colgan, Adam Polkinghorne, Marc R. Wilkins, Cheyne Flanagan, Amber Gillett, Jon Hanger, Rebecca N. Johnson, Peter Timms
Software Mentions: 8
Published: almost 12 years ago
10.1186/s13059-020-02223-9
Equivalent DNA methylation variation between monozygotic co-twins and unrelated individuals reveals universal epigenetic inter-individual dissimilarityCited by: 17
Author(s): Benjamin Planterose Jiménez, Fan Liu, Amke Caliebe, Diego Montiel González, Jordana T. Bell, Manfred Kayser, Athina Vidaki
Software Mentions: 8
Published: over 5 years ago
10.7717/peerj.6362
Empirical analysis and modeling of Argos Doppler location errors in RomaniaCited by: 4
Author(s): Laurenţiu Rozyłowicz, Florian Bodescu, Cristiana Maria Ciocănea, Athanasios Alexandru Gavrilidis, Steluţa Manolache, Mihaela Matache, Iulia V. Miu, Ionut C Moale, Andreea Niţă, Viorel D. Popescu
Software Mentions: 8
Published: over 7 years ago
10.3389/fpsyg.2017.02229
Work Engagement among Rescue Workers: Psychometric Properties of the Portuguese UWESCited by: 18
Author(s): Jorge Sinval, Alexandra Marqués Pinto, Cristina Queirós, João Marôco
Software Mentions: 8
Published: over 8 years ago
10.1038/s41598-019-46487-z
Understanding how birds rebuild fat stores during migration: insights from an experimental studyCited by: 15
Author(s): Pedro M. Araújo, Iván Viegas, Afonso D. Rocha, Auxiliadora Villegas, John G. Jones, Liliana Mendonça, Jaime A. Ramos, José A. Masero, José A. Alves
Software Mentions: 8
Published: almost 7 years ago
10.3389/fneur.2021.615790
Retinal Thickness Analysis in Progressive Multiple Sclerosis Patients Treated With Epigallocatechin Gallate: Optical Coherence Tomography Results From the SUPREMES StudyCited by: 7
Author(s): Katharina Klumbies, Rebekka Rust, Jan Dörr, Frank Konietschke, Friedemann Paul, Judith Bellmann‐Strobl, Alexander U. Brandt, Hanna Zimmermann
Software Mentions: 8
Published: about 5 years ago
10.1186/gb-2013-14-9-r95
Comprehensive evaluation of differential gene expression analysis methods for RNA-seq dataCited by: 594
Author(s): Franck Rapaport, Raya Khanin, Yupu Liang, Mono Pirun, Azra Krek, Paul Zumbo, Christopher E. Mason, Nicholas D. Socci, Doron Betel
Software Mentions: 8
Published: over 13 years ago
10.1186/s42523-021-00096-2
Salmon gut microbiota correlates with disease infection status: potential for monitoring health in farmed animalsCited by: 65
Author(s): Davide Bozzi, Jacob Agerbo Rasmussen, Christian Carøe, Harald Sveier, Kristian Nordøy, M. Thomas P. Gilbert, Morten T. Limborg
Software Mentions: 8
Published: about 5 years ago
10.1371/journal.pone.0216485
Understanding heterogeneous tumor microenvironment in metastatic melanomaCited by: 31
Author(s): Yiyi Yan, Alexey A. Leontovich, Michael J. Gerdes, Keyur Desai, Jinhong Dong, Anup Sood, Alberto Santamaría-Pang, Aaron S. Mansfield, Chrystal Chadwick, Rong Zhang, Wendy K. Nevala, Thomas J. Flotte, Fiona Ginty, Svetomir N. Markovic
Software Mentions: 8
Published: about 7 years ago
10.1002/acn3.51441
Gut microbiome is associated with multiple sclerosis activity in childrenCited by: 18
Author(s): Mary Horton, Kathryn McCauley, Douglas Fadrosh, Kei E. Fujimura, Jennifer Graves, Jayne Ness, Yolanda Wheeler, Mark Gorman, Leslie Benson, Bianca Weinstock‐Guttman, Amy Waldman, Moses Rodriguez, Jan‐Mendelt Tillema, Lauren Krupp, Anita Belman, Soe Mar, Mary Rensel, Tanuja Chitnis, T. Charles Casper, John Rose, Janace Hart, Xiaorong Shao, Helen Tremlett, Susan V. Lynch, Lisa F. Barcellos, Emmanuelle Waubant
Software Mentions: 8
Published: almost 5 years ago
10.1186/s12859-020-03641-z
A rank-based marker selection method for high throughput scRNA-seq dataCited by: 23
Author(s): Alexander Vargo, Anna C. Gilbert
Software Mentions: 8
Published: over 5 years ago
10.1371/journal.pone.0051609
Comparative Transcriptome Profiling of the Early Response to Magnaporthe oryzae in Durable Resistant vs Susceptible Rice (Oryza sativa L.) GenotypesCited by: 129
Author(s): Paolo Bagnaresi, Chiara Biselli, Luigi Orrù, Simona Urso, Laura Crispino, Pamela Abbruscato, Pietro Piffanelli, Elisabetta Lupotto, Luigi Cattivelli, Giampiero Valè
Software Mentions: 8
Published: over 13 years ago
10.1371/journal.pone.0253847
TeamTree analysis: A new approach to evaluate scientific productionCited by: 2
Author(s): Frank W. Pfrieger
Software Mentions: 8
Published: almost 5 years ago
10.1038/s41598-020-67870-1
Investigating the influence of mtDNA and nuclear encoded mitochondrial variants on high intensity interval training outcomesCited by: 6
Author(s): Nicholas R. Harvey, Sarah Voisin, Rodney Arthur Lea, Xu Yan, Miles C. Benton, ID Papadimitriou, Jacques Michaux, Larisa M. Haupt, Kevin J. Ashton, Nir Eynon, Lyn R. Griffiths
Software Mentions: 8
Published: almost 6 years ago
10.1186/s13148-020-00899-1
Highly accurate skin-specific methylome analysis algorithm as a platform to screen and validate therapeutics for healthy agingCited by: 23
Author(s): Mariana Boroni, Alessandra Zonari, Carolina Reis de Oliveira, Kallie Al-Katib, Edgar Andrés Ochoa Cruz, Lear E. Brace, Juliana Lott Carvalho
Software Mentions: 8
Published: almost 6 years ago
10.1038/srep46658
Metabolism dysregulation induces a specific lipid signature of nonalcoholic steatohepatitis in patientsCited by: 148
Author(s): Franck Chiappini, Audrey Coilly, Hanane Kadar, Philippe Gual, Albert Tran, Christophe Desterke, Didier Samuel, Jean‐Charles Duclos‐Vallée, David Touboul, Justine Bertrand‐Michel, Alain Brunelle, Catherine Guettier, François Le Naour
Software Mentions: 8
Published: about 9 years ago
10.1038/s41419-021-03525-x
Loss of retinoic acid receptor-related receptor alpha (Rorα) promotes the progression of UV-induced cSCCCited by: 6
Author(s): Guolong Zhang, Guorong Yan, Fu Zhuo, Yuhao Wu, Fei Wu, Zhe Zheng, Shiji Fang, Ying Gao, Xiao Bao, Yeqiang Liu, Xiuli Wang, Sibo Zhu
Software Mentions: 8
Published: over 5 years ago
10.1186/s12889-021-10979-3
Associations of meeting 24-h movement guidelines with stress and self-rated health among adults: is meeting more guidelines associated with greater benefits?Cited by: 16
Author(s): Kaja Kastelic, Željko Pedišić, Dean Lipovac, Nika Kastelic, Sitong Chen, Nejc Šarabon
Software Mentions: 8
Published: about 5 years ago
10.1186/s12859-019-2974-3
miRFA: an automated pipeline for microRNA functional analysis with correlation support from TCGA and TCPA expression data in pancreatic cancerCited by: 11
Author(s): Emmy Borgmästars, Hendrik A de Weerd, Zelmina Lubovac-Pilav, Malin Sund
Software Mentions: 8
Published: almost 7 years ago
10.1371/journal.pmed.1002223
Master Regulators of Oncogenic KRAS Response in Pancreatic Cancer: An Integrative Network Biology AnalysisCited by: 38
Author(s): Shivan Sivakumar, Inês de Santiago, L Chlon, Florian Markowetz
Software Mentions: 8
Published: over 9 years ago
10.1038/s41396-021-00902-4
Intracellular bacteria are common and taxonomically diverse in cultured and in hospite algal endosymbionts of coral reefsCited by: 51
Author(s): Justin Maire, Sam K. Girvan, Sophie E. Barkla, Alexis Perez‐Gonzalez, David J. Suggett, Linda L. Blackall, Madeleine J. H. van Oppen
Software Mentions: 8
Published: over 5 years ago
10.1371/journal.pone.0228782
Learning about the Ellsberg Paradox reduces, but does not abolish, ambiguity aversionCited by: 6
Author(s): Ruonan Jia, Ellen E. Furlong, Sean Gao, Laurie R. Santos, Ifat Levy
Software Mentions: 8
Published: over 6 years ago
10.1038/s41598-019-50642-x
Transcriptome Sequencing of Peripheral Blood Mononuclear Cells from Elite Controller-Long Term Non ProgressorsCited by: 11
Author(s): Francisco Díez-Fuertes, Humberto Erick De La Torre Tarazona, Esther Calonge, María Pernas, María del Mar Alonso-Socas, Laura Capa, Javier García-Pérez, Anavaj Sakuntabhai, José Alcamı́
Software Mentions: 8
Published: over 6 years ago
10.7717/peerj.8667
Element concentrations in pelagic<i>Sargassum</i>along the Mexican Caribbean coast in 2018-2019Cited by: 78
Author(s): Rosa E. Rodríguez-Martínez, Priyadarsi D. Roy, Nuria Torrescano-Valle, Nancy Cabañillas-Terán, Silvia Carrillo‐Domínguez, Ligia Collado‐Vides, Marta García-Sánchez, Brigitta I. van Tussenbroek
Software Mentions: 8
Published: over 6 years ago
10.1038/s41598-019-44597-2
NOMePlot: analysis of DNA methylation and nucleosome occupancy at the single moleculeCited by: 3
Author(s): Francisco Requena, Helena G Asenjo, Guillermo Barturen, Jordi Martorell-Marugán, Pedro Carmona-Sáez, David Landeira
Software Mentions: 8
Published: about 7 years ago
10.1007/s00018-018-2898-5
Celiac disease biomarkers identified by transcriptome analysis of small intestinal biopsiesCited by: 32
Author(s): Hanna Bragde, Ulf Jansson, Mats Fredrikson, Ewa Grodzinsky, Jan Söderman
Software Mentions: 8
Published: almost 8 years ago
10.3389/fimmu.2021.711337
Single-Cell RNA Sequencing Identifies New Inflammation-Promoting Cell Subsets in Asian Patients With Chronic PeriodontitisCited by: 17
Author(s): Shu‐Jiao Qian, Qing-Guo Huang, Ruiying Chen, Jia-Ji Mo, Liyun Zhou, Yi Zhao, Bin Li, Hong-Chang Lai
Software Mentions: 8
Published: almost 5 years ago
10.1371/journal.pone.0049376
Do Seabirds Differ from Other Migrants in Their Travel Arrangements? On Route Strategies of Cory’s Shearwater during Its Trans-Equatorial JourneyCited by: 43
Author(s): Maria P. Dias, José Pedro Granadeiro, Paulo Catry
Software Mentions: 8
Published: over 13 years ago
10.3390/cancers13122955
PLEK2, RRM2, GCSH: A Novel WWOX-Dependent Biomarker Triad of Glioblastoma at the Crossroads of Cytoskeleton Reorganization and Metabolism AlterationsCited by: 10
Author(s): Żaneta Kałuzińska, Damian Kołat, Andrzej K. Bednarek, Elżbieta Płuciennik
Software Mentions: 8
Published: about 5 years ago
10.1186/1471-2164-14-S5-S9
Detection and classification of peaks in 5' cap RNA sequencing dataCited by: 4
Author(s): Dario Strbenac, Nicola J. Armstrong, Jean Yee Hwa Yang
Software Mentions: 8
Published: over 12 years ago
10.1093/gigascience/giz147
Genome-wide analysis of the H3K27me3 epigenome and transcriptome in Brassica rapaCited by: 16
Author(s): Miriam Payá‐Milans, Laura Poza‐Viejo, Patxi San Martín-Úriz, David Lara‐Astiaso, Mark D. Wilkinson, Pedro Crevillén
Software Mentions: 8
Published: over 6 years ago
10.1186/s12859-021-04124-5
Popularity and performance of bioinformatics software: the case of gene set analysisCited by: 21
Author(s): Chengshu Xie, Shaurya Jauhari, Antonio M. Mora
Software Mentions: 8
Published: about 5 years ago
10.1186/s13059-019-1855-4
Common DNA sequence variation influences 3-dimensional conformation of the human genomeCited by: 66
Author(s): David U. Gorkin, Yunjiang Qiu, Ming Hu, Kipper Fletez-Brant, Tristin Liu, Anthony Schmitt, Amina Noor, Joshua Chiou, Kyle J. Gaulton, Jonathan Sebat, Yun Li, Kasper D. Hansen, Bing Ren
Software Mentions: 8
Published: over 6 years ago
10.1097/MD.0000000000026194
Integrated analysis of ceRNA network in hepatocellular carcinoma using bioinformatics analysisCited by: 5
Author(s): Yu Luo, Hongjuan Li, Hongli Huang, Ling Xue, Haiwen Li, Li Liu, Haiyan Fu
Software Mentions: 8
Published: about 5 years ago
10.1038/s42003-020-1049-3
Perceptual metacognition of human faces is causally supported by function of the lateral prefrontal cortexCited by: 10
Author(s): Regina C. Lapate, Jason Samaha, Bas Rokers, Bradley R. Postle, Richard J. Davidson
Software Mentions: 8
Published: almost 6 years ago
10.1186/s12859-020-3506-x
Negative binomial additive model for RNA-Seq data analysisCited by: 16
Author(s): Ruwei Xu, Pei Fen Kuan
Software Mentions: 8
Published: about 6 years ago