Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-018-1616-9

https://doi.org/10.1186/s13059-018-1616-9

Population structure of human gut bacteria in a diverse cohort from rural Tanzania and Botswana

Cited by: 61
Author(s): Matthew E.B. Hansen, Meagan A Rubel, Aubrey Bailey, Alessia Ranciaro, S. R. Thompson, Michael C. Campbell, William Beggs, Jaanki R. Dave, Gaonyadiwe George Mokone, Sununguko Wata Mpoloka, Thomas Nyambo, Christian C. Abnet, Stephen J. Chanock, Frederic D. Bushman, Sarah A. Tishkoff
Published: almost 6 years ago

Software Mentions 8

cran: PERMANOVA
Multivariate Analysis of Variance Based on Distances and Permutations
Papers that mentioned: 6,292
cran: plink
IRT Separate Calibration Linking Methods
Papers that mentioned: 399
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
pypi: plink
A full featured Tk-based knot and link editor
Papers that mentioned: 399
pypi: scikit-bio
Data structures, algorithms and educational resources for bioinformatics.
Papers that mentioned: 41
pypi: STAMP
A graphical software package for analyzing taxonomic and functional profiles.
Papers that mentioned: 1,190
pypi: statsmodels
Statistical computations and models for Python
Papers that mentioned: 277
pypi: Swarm
Swarm is a strategy rouge-like space simulator game written with `pygame/python3`.
Papers that mentioned: 151