Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Papers: 10.1186/s12859-017-1803-9
https://doi.org/10.1186/s12859-017-1803-9
Cited by: 11
Author(s): Yuanhang Liu, Ping Wu, Jingqi Zhou, Teresa L. Johnson‐Pais, Zhao Lai, Wasim H. Chowdhury, Ronald Rodríguez, Yidong Chen
Published: over 6 years ago
Software Mentions 8
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distributionPapers that mentioned: 9,583
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in RPapers that mentioned: 6,568
bioconductor: GenomicRanges
Representation and manipulation of genomic intervalsPapers that mentioned: 323
bioconductor: Rsubread
Mapping, quantification and variant analysis of sequencing dataPapers that mentioned: 331
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assaysPapers that mentioned: 3,071