Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fphys.2021.662132

https://doi.org/10.3389/fphys.2021.662132

Cited by: 10
Author(s): Austin E. Gillen, Rui Fu, Kent Riemondy, Jennifer Jager, Bin Fang, Mitchell A. Lazar, Sandra L. Martin
Published: almost 3 years ago

Software Mentions 8

bioconductor: ComplexHeatmap
Make Complex Heatmaps
Papers that mentioned: 565
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: tximport
Import and summarize transcript-level estimates for transcript- and gene-level analysis
Papers that mentioned: 367
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
cran: valr
Genome Interval Arithmetic
Papers that mentioned: 4
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
pypi: browser
A package to prevent Dependency Confusion attacks against Yandex.
Papers that mentioned: 2,125
pypi: RSeQC
RNA-seq QC Package
Papers that mentioned: 366