10.3389/fimmu.2018.02074
Epigenetic Enhancer Marks and Transcription Factor Binding Influence Vκ Gene Rearrangement in Pre-B Cells and Pro-B CellsCited by: 13
Author(s): Eden Kleiman, Salvatore Loguercio, Ann J. Feeney
Software Mentions: 9
Published: almost 8 years ago
10.3390/biomedicines9040368
Single-Cell RNA Sequencing in Parkinson’s DiseaseCited by: 13
Author(s): Shi-Xun Ma, Su Bin Lim
Software Mentions: 9
Published: about 5 years ago
10.1038/s42003-021-01948-y
High biodiversity in a benzene-degrading nitrate-reducing culture is sustained by a few primary consumersCited by: 9
Author(s): Chrats Melkonian, Lucas Fillinger, Siavash Atashgahi, Ulisses Nunes da Rocha, Eric Kuiper, Brett G. Olivier, Martin Braster, Willi Gottstein, Rick Helmus, John R. Parsons, Hauke Smidt, Marcelle van der Waals, Jan Gerritse, Bernd W. Brandt, Wilfred F. M. Röling, Douwe Molenaar, Rob J.M. van Spanning
Software Mentions: 9
Published: about 5 years ago
10.12688/f1000research.20916.2
Fast effect size shrinkage software for beta-binomial models of allelic imbalanceCited by: 11
Author(s): Joshua P. Zitovsky, Michael I. Love
Software Mentions: 9
Published: over 5 years ago
10.1038/s41598-017-13506-w
Associations of interactions between NLRP3 SNPs and HLA mismatch with acute and extensive chronic graft-versus-host diseasesCited by: 15
Author(s): Hidekazu Takahashi, Naoko Okayama, Natsu Yamaguchi, Yuta Miyahara, Yasuo Morishima, Yutaka Suehiro, Takahiro Yamasaki, Koji Tamada, Satoshi Takahashi, Arinobu Tojo, Shigetaka Asano, Tsuyoshi Tanabe
Software Mentions: 9
Published: over 8 years ago
10.1208/s12249-020-01660-w
Data-Driven Modeling of the Bicalutamide Dissolution from Powder SystemsCited by: 9
Author(s): Aleksander Mendyk, Adam Pacławski, Joanna Szafraniec-Szczęsny, Agata Antosik, Witold Jamróz, Marian Paluch, Renata Jachowicz
Software Mentions: 9
Published: about 6 years ago
10.1186/1475-2875-11-374
Electric nets and sticky materials for analysing oviposition behaviour of gravid malaria vectorsCited by: 22
Author(s): Sisay Dugassa, Jenny M. Lindh, Stephen J. Torr, Florence Oyieke, Steve W. Lindsay, Ulrike Fillinger
Software Mentions: 9
Published: over 13 years ago
10.3390/nu12010245
Alpha-Lactalbumin Enriched Whey Protein Concentrate to Improve Gut, Immunity and Brain Development in Preterm PigsCited by: 15
Author(s): Charlotte Holme Nielsen, Yan Hui, Duc Ninh Nguyen, Agnethe May Ahnfeldt, Douglas G. Burrin, Bolette Hartmann, Anne B. Heckmann, Per Torp Sangild, Thomas Thymann, Stine Brandt Bering
Software Mentions: 9
Published: over 6 years ago
10.1016/j.celrep.2021.109698
Transitions in lineage specification and gene regulatory networks in hematopoietic stem/progenitor cells over human developmentCited by: 33
Author(s): Anindita Roy, Guanlin Wang, Deena Iskander, Sorcha O’Byrne, Natalina E. Elliott, Jennifer O’Sullivan, Gemma Buck, Elisabeth F. Heuston, Wei Wen, Alba Rodríguez-Meira, Peng Hua, Anastasios Karadimitris, Adam J. Mead, David M. Bodine, Irene Roberts, Bethan Psaila, Supat Thongjuea
Software Mentions: 9
Published: almost 5 years ago
10.1016/j.celrep.2019.11.077
Integrated Epigenome, Exome, and Transcriptome Analyses Reveal Molecular Subtypes and Homeotic Transformation in Uterine FibroidsCited by: 42
Author(s): Jitu W. George, Huihui Fan, Benjamin K. Johnson, Tyler J. Carpenter, Kelly K. Foy, Anindita Chatterjee, Amanda L. Patterson, Julie Koeman, Marie Adams, Zachary Madaj, David Chesla, Erica E. Marsh, Timothy J. Triche, Hui Shen, Jose Teixeira
Software Mentions: 9
Published: over 6 years ago
10.3389/fgene.2019.00460
Learning Causal Biological Networks With the Principle of Mendelian RandomizationCited by: 37
Author(s): Md. Bahadur Badsha, Audrey Qiuyan Fu
Software Mentions: 9
Published: about 7 years ago
10.18632/aging.104064
Clinical and prognostic pan-cancer analysis of m6A RNA methylation regulators in four types of endocrine system tumorsCited by: 29
Author(s): Kai Li, Hui Luo, Hui Luo, Xiao Zhu
Software Mentions: 9
Published: over 5 years ago
10.1111/1755-0998.13362
Chromosome‐scale assembly of the genome of <i>Salix</i><i>dunnii</i> reveals a male‐heterogametic sex determination system on chromosome 7Cited by: 24
Author(s): Li He, Kai‐Hua Jia, Rengang Zhang, Yuan Wang, Tian-Le Shi, Zhichao Li, Si-Wen Zeng, Xin-Jie Cai, Natascha D. Wagner, Elvira Hörandl, Aline Muyle, Ke Yang, Deborah Charlesworth, Jian‐Feng Mao
Software Mentions: 9
Published: over 5 years ago
10.1155/2021/5510780
A Five-Gene Prognostic Nomogram Predicting Disease-Free Survival of Differentiated Thyroid CancerCited by: 5
Author(s): Pan Ruchong, Hai-ping Tang, Xiang Wang
Software Mentions: 9
Published: about 5 years ago
10.1371/journal.pone.0036664
Functional Morphometric Analysis of the Furcula in Mesozoic BirdsCited by: 33
Author(s): Roger A. Close, Emily J. Rayfield
Software Mentions: 9
Published: about 14 years ago
10.3389/fmicb.2020.01536
Low Abundance of Methanotrophs in Sediments of Shallow Boreal Coastal Zones With High Water Methane ConcentrationsCited by: 13
Author(s): Elias Broman, Xiaole Sun, Christian Stranne, Marco Salgado, Stefano Bonaglia, M. C. Geibel, Martin Jakobsson, Alf Norkko, Christoph Humborg, Francisco J. A. Nascimento
Software Mentions: 9
Published: almost 6 years ago
10.3389/fcimb.2020.00137
Microbiotyping the Sinonasal MicrobiomeCited by: 15
Author(s): Ahmed Bassiouni, S. Paramasivan, Arron Shiffer, Matthew R. Dillon, Emily K. Cope, Clare Cooksley, Mahnaz Ramezanpour, Sophia Moraitis, Mohammad Javed Ali, Benjamin S. Bleier, Claudio Callejas, Marjolein Cornet, Richard Douglas, Daniel Lorena Dutra, Christos Georgalas, Richard J. Harvey, Peter H. Hwang, Amber U. Luong, Rodney J. Schlosser, Pongsakorn Tantilipikorn, Marc A. Tewfik, Sarah Vreugde, Peter John Wormald, J. Gregory Caporaso, Alkis James Psaltis
Software Mentions: 9
Published: about 6 years ago
10.1186/s12889-021-10715-x
Assessing critical gaps in COVID-19 testing capacity: the case of delayed results in EcuadorCited by: 28
Author(s): Irene Torres, Rachel Sippy, Fernando Sacoto
Software Mentions: 9
Published: about 5 years ago
10.1098/rsos.181269
Unscrambling variation in avian eggshell colour and patterning in a continent-wide studyCited by: 3
Author(s): Kiara L. L'Herpiniere, Louis G. O’Neill, Andrew F. Russell, Daisy Englert Duursma, Simon C. Griffith
Software Mentions: 9
Published: over 7 years ago
10.1371/journal.pgen.1008671
PEA15 loss of function and defective cerebral development in the domestic catCited by: 3
Author(s): Emily C. Graff, J. Nicholas Cochran, Christopher B. Kaelin, Kenneth Day, Heather L. Gray‐Edwards, Rie Watanabe, Jey W. Koehler, Rebecca A. Falgoust, Jeremy W. Prokop, R Myers, Nancy R. Cox, Gregory S. Barsh, Douglas R. Martin
Software Mentions: 9
Published: over 5 years ago
10.1371/journal.pone.0121102
ShapeR: An R Package to Study Otolith Shape Variation among Fish PopulationsCited by: 100
Author(s): Lísa Anne Libungan, Snæbjörn Pálsson
Software Mentions: 9
Published: over 11 years ago
10.3390/ijms22042214
How Are the Flower Structure and Nectar Composition of the Generalistic Orchid Neottia ovata Adapted to a Wide Range of Pollinators?Cited by: 8
Author(s): Emilia Brzosko, Andrzej Bajguz, Magdalena Chmur, Justyna Burzyńska, Edyta Jermakowicz, Paweł Mirski, Piotr Zieliński
Software Mentions: 9
Published: over 5 years ago
10.1111/mec.15735
Phylogenetic and geographical analysis of a retrovirus during the early stages of endogenous adaptation and exogenous spread in a new hostCited by: 11
Author(s): Bonnie Chaban, Faye Wedrowicz, Fiona Hogan, Peter Timms
Software Mentions: 9
Published: over 5 years ago
10.3389/fpls.2015.01172
The Potential of the MAGIC TOM Parental Accessions to Explore the Genetic Variability in Tomato Acclimation to Repeated Cycles of Water Deficit and RecoveryCited by: 23
Author(s): Julie Ripoll, Laurent Urban, Nadia Bertin
Software Mentions: 9
Published: over 10 years ago
10.1186/s12885-020-6638-5
Multiple m6A RNA methylation modulators promote the malignant progression of hepatocellular carcinoma and affect its clinical prognosisCited by: 33
Author(s): Nanfang Qu, Sanyu Qin, Xuemei Zhang, Xiaotong Bo, Zhengchun Liu, Chao Tan, Guiqiong Wen, Haixing Jiang
Software Mentions: 9
Published: over 6 years ago
10.1186/s13073-020-00786-7
A cell-of-origin epigenetic tracer reveals clinically distinct subtypes of high-grade serous ovarian cancerCited by: 11
Author(s): Pietro Lo Riso, Carlo Emanuele Villa, Gilles Gasparoni, Andrea Vingiani, Raffaele Luongo, Anna Manfredi, Annemarie Jungmann, Alessia Bertolotti, Francesca Borgo, Annalisa Garbi, Michela Lupia, Pasquale Laise, Vivek Das, Giancarlo Pruneri, Giuseppe Viale, Nicoletta Colombo, Teresa Manzo, Luigi Nezi, Ugo Cavallaro, Davide Cacchiarelli, Jörn Walter, Giuseppe Testa
Software Mentions: 9
Published: over 5 years ago
10.1371/journal.pone.0179337
The acoustic repertoire and behavioural context of the vocalisations of a nocturnal dasyurid, the eastern quoll (Dasyurus viverrinus)Cited by: 5
Author(s): Annalie Dorph, Paul G. McDonald
Software Mentions: 9
Published: almost 9 years ago
10.3389/fmicb.2018.02571
PredT4SE-Stack: Prediction of Bacterial Type IV Secreted Effectors From Protein Sequences Using a Stacked Ensemble MethodCited by: 97
Author(s): Yi Xiong, Qiankun Wang, Junchen Yang, Xiaolei Zhu, Dong‐Qing Wei
Software Mentions: 9
Published: over 7 years ago
10.1080/19490976.2021.1957408
Imbalance of the intestinal virome and altered viral-bacterial interactions caused by a conditional deletion of the vitamin D receptorCited by: 14
Author(s): Jilei Zhang, Yongguo Zhang, Yinglin Xia, Jun Sun
Software Mentions: 9
Published: over 5 years ago
10.1371/journal.pcbi.1008982
Predicting mean ribosome load for 5’UTR of any length using deep learningCited by: 14
Author(s): Alexander Karollus, Žiga Avsec, Julien Gagneur
Software Mentions: 9
Published: about 5 years ago
10.3389/fimmu.2021.623762
Gene Expression Classifier Reveals Prognostic Osteosarcoma Microenvironment Molecular SubtypesCited by: 14
Author(s): Yi-Jiang Song, Yanyang Xu, Cong Deng, Xuejun Zhu, Jianchang Fu, Hongmin Chen, Jinchang Lu, Huaiyuan Xu, Guohui Song, Qinglian Tang, Jin Wang
Software Mentions: 9
Published: about 5 years ago
10.3389/fonc.2020.578809
Identification and Verification on Prognostic Index of Lower-Grade Glioma Immune-Related LncRNAsCited by: 7
Author(s): Jing Wen, Youjun Wang, Lili Luo, Peng Lu, Caixia Chen, Jian Guo, Yunlong Ge, Wenjun Li, Xin Jin
Software Mentions: 9
Published: over 5 years ago
10.3389/fgene.2020.576566
Systematic Profiling of Immune Risk Model to Predict Survival and Immunotherapy Response in Head and Neck Squamous Cell CarcinomaCited by: 9
Author(s): Xingyu Liu, Jiarui Chen, Wei Lu, Zhao-Yi Zeng, Jiali Li, Xueping Jiang, Yanping Gao, Yan Gong, Qiuji Wu, Conghua Xie
Software Mentions: 9
Published: over 5 years ago
10.1371/journal.pone.0235930
Neither per, nor tim1, nor cry2 alone are essential components of the molecular circadian clockwork in the Madeira cockroachCited by: 3
Author(s): Achim Werckenthin, Jannik Huber, Thordis Arnold, Susanne Koziarek, Marcus J. A. Plath, Jenny Aino Plath, Olaf Stursberg, Hanspeter Herzel, Monika Stengl
Software Mentions: 9
Published: almost 6 years ago
10.1371/journal.pone.0158259
Extensive Transcriptomic and Genomic Analysis Provides New Insights about Luminal Breast CancersCited by: 15
Author(s): Inna Tishchenko, Heloisa Helena Milioli, Carlos Riveros, Pablo Moscato
Software Mentions: 9
Published: about 10 years ago
10.1002/ece3.6335
High dispersal capacity and biogeographic breaks shape the genetic diversity of a globally distributed reef‐dwelling calcifierCited by: 16
Author(s): Martina Prazeres, Raphaël Morard, Thomas E. Roberts, Steve S. Doo, Jamaluddin Jompa, Christiane Schmidt, Marleen Stuhr, Willem Renema, Michal Kučera
Software Mentions: 9
Published: about 6 years ago
10.1371/journal.pone.0239919
The recurring impact of storm disturbance on black sea bass (Centropristis striata) movement behaviors in the Mid-Atlantic BightCited by: 3
Author(s): Caroline J. Wiernicki, Michael H. P. O’Brien, Fan Zhang, Vyacheslav Lyubchich, Ming Li, David H. Secor
Software Mentions: 9
Published: over 5 years ago
10.1371/journal.pbio.3000202
PlotsOfData—A web app for visualizing data together with their summariesCited by: 394
Author(s): Marten Postma, Joachim Goedhart
Software Mentions: 9
Published: about 7 years ago
10.15698/mic2021.08.757
Genome, transcriptome and secretome analyses of the antagonistic, yeast-like fungus Aureobasidium pullulans to identify potential biocontrol genesCited by: 13
Author(s): Maria Paula Rueda‐Mejia, Lukas Nägeli, Stefanie Lutz, Richard D. Hayes, Adithi R. Varadarajan, Igor V. Grigoriev, Christian H. Ahrens, Florian M. Freimoser
Software Mentions: 9
Published: almost 5 years ago
10.1186/s12885-021-07840-6
Cost-effectiveness of different surgical treatment approaches for early breast cancer: a retrospective matched cohort study from ChinaCited by: 6
Author(s): Qing Yang, Xiaorong Zhong, Wei Zhang, Ting Luo, Ping He, Hong Zheng
Software Mentions: 9
Published: over 5 years ago
10.1186/s40168-021-01054-5
A multi-OMIC characterisation of biodegradation and microbial community succession within the PET plastisphereCited by: 39
Author(s): Robyn J. Wright, Rafael Bosch, Morgan G. I. Langille, Matthew I. Gibson, Joseph Alexander Christie-Oleza
Software Mentions: 9
Published: about 5 years ago
10.1038/s41598-020-74691-9
Integration of geoscience frameworks into digital pathology analysis permits quantification of microarchitectural relationships in histological landscapesCited by: 4
Author(s): Timothy J. Kendall, Catherine Mary Duff, A. D. Thomson, John P. Iredale
Software Mentions: 9
Published: over 5 years ago
10.1016/j.anbehav.2017.04.001
Male great tits assort by personality during the breeding seasonCited by: 29
Author(s): Katerina V.‐A. Johnson, Lucy M. Aplin, Ella F. Cole, Damien R. Farine, Josh A. Firth, Samantha C. Patrick, Ben C. Sheldon
Software Mentions: 9
Published: about 9 years ago
10.7554/eLife.39380
Intergenerational epigenetic inheritance of cancer susceptibility in mammalsCited by: 38
Author(s): Bluma J. Lesch, Zuzana Tóthová, Elizabeth A. Morgan, Zhicong Liao, Roderick T. Bronson, Benjamin L. Ebert, David C. Page
Software Mentions: 9
Published: about 7 years ago
10.3389/fninf.2017.00062
Semi-automated Anatomical Labeling and Inter-subject Warping of High-Density Intracranial Recording Electrodes in ElectrocorticographyCited by: 78
Author(s): Liberty S. Hamilton, David L. Chang, Morgan B. Lee, Edward F. Chang
Software Mentions: 9
Published: over 8 years ago
10.1186/s12867-018-0111-x
Coincidence cloning recovery of Brucella melitensis RNA from goat tissues: advancing the in vivo analysis of pathogen gene expression in brucellosisCited by: 4
Author(s): Paola M. Boggiatto, Daniel Fitzsimmons, Darrell O. Bayles, David P. Alt, Catherine E. Vrentas, Steven C. Olsen
Software Mentions: 9
Published: almost 8 years ago
10.1371/journal.pone.0156744
Genome-Assisted Prediction of Quantitative Traits Using the R Package sommerCited by: 408
Author(s): Giovanny Covarrubias‐Pazaran
Software Mentions: 9
Published: about 10 years ago
10.1186/s12859-021-04020-y
MeltingPlot, a user-friendly online tool for epidemiological investigation using High Resolution Melting dataCited by: 4
Author(s): Matteo Perini, Gherard Batisti Biffignandi, Domenico Di Carlo, Ajay Ratan Pasala, Aurora Piazza, Simona Panelli, Gian Vincenzo Zuccotti, Francesco Comandatore
Software Mentions: 9
Published: over 5 years ago
10.1371/journal.pcbi.1008223
Causal network inference from gene transcriptional time-series response to glucocorticoidsCited by: 15
Author(s): Jonathan Lu, Bianca Dumitrascu, Ian C. McDowell, Brian Jo, Alejandro Barrera, Linda K. Hong, Sarah M. Leichter, Timothy E. Reddy, Barbara E. Engelhardt
Software Mentions: 9
Published: over 5 years ago
10.1186/1471-2288-14-91
Comparing classification methods for diffuse reflectance spectra to improve tissue specific laser surgeryCited by: 8
Author(s): Alexander Engelhardt, Rajesh Kanawade, Christian Knipfer, Matthias Schmid, Florian Stelzle, Werner Adler
Software Mentions: 9
Published: almost 12 years ago
10.1371/journal.pbio.2004045
A molecular atlas of the developing ectoderm defines neural, neural crest, placode, and nonneural progenitor identity in vertebratesCited by: 41
Author(s): Jean-Louis Plouhinec, Sofía Medina-Ruíz, Caroline Borday, Elsa Bernard, Jean-Philippe Vert, Michael B. Eisen, Richard M. Harland, Anne H. Monsoro-Burq
Software Mentions: 9
Published: over 8 years ago
10.3390/insects12070577
Transcriptome Analyses Provide Insights into the Aggressive Behavior toward Conspecific and Heterospecific in Thitarodes xiaojinensis (Lepidoptera: Hepialidae)Cited by: 1
Author(s): Zhongchen Rao, Li Cao, Hua Wu, Richou Han
Software Mentions: 9
Published: almost 5 years ago
10.1371/journal.pone.0214459
A method to improve fishing selectivity through age targeted fishing using life stage distribution modellingCited by: 5
Author(s): Neil M. Burns, David M. Bailey, Peter J. Wright
Software Mentions: 9
Published: about 7 years ago
10.1186/s12943-021-01405-8
Uncovering cancer vulnerabilities by machine learning prediction of synthetic lethalityCited by: 6
Author(s): Salvatore Benfatto, Özdemirhan Serçin, Francesca R. Dejure, Amir Abdollahi, Frank T. Zenke, Balca R. Mardin
Software Mentions: 9
Published: almost 5 years ago
10.1371/journal.pone.0188564
Widespread local chronic stressors in Caribbean coastal habitatsCited by: 10
Author(s): Iliana Chollett, Rachel Collin, Carolina Bastidas, Aldo Cróquer, Peter M. H. Gayle, Eric Jordán-Dahlgren, Karen Koltes, Hazel A. Oxenford, Alberto Rodríguez-Ramírez, Ernesto Weil, Jahson Berhane Alemu, David Bone, Kenneth C. Buchan, Marcia Creary Ford, Edgar Escalante‐Mancera, Jaime Garzón-Ferreira, Héctor M. Guzmán, Björn Kjerfve, Eduardo Klein, Croy McCoy, Arthur C. Potts, Francisco Ruiz-Rentería, Struan R. Smith, John Tschirky, Jorge Cortés
Software Mentions: 9
Published: over 8 years ago
10.1186/s12935-020-1113-6
Construction of a novel gene-based model for prognosis prediction of clear cell renal cell carcinomaCited by: 81
Author(s): Zedan Zhang, Enyu Lin, Hongkai Zhuang, Lu Xie, Xiaoqiang Feng, Jiumin Liu, Yuming Yu
Software Mentions: 9
Published: over 6 years ago
10.1155/2020/4252580
A Novel RNA-Seq-Based Model for Preoperative Prediction of Lymph Node Metastasis in Oral Squamous Cell CarcinomaCited by: 7
Author(s): Bo Qiao, Min Zhao, Jing Wu, Huan Wu, Yiming Zhao, Fanhao Meng, Yu Tian, Situo Wang, Jianxin Shi, Haizhong Zhang
Software Mentions: 9
Published: almost 6 years ago
10.3389/fpsyg.2019.02174
Expanding the Map of Intrinsic and Extrinsic Aspirations Using Network Analysis and Multidimensional Scaling: Examining Four New AspirationsCited by: 24
Author(s): Frank Martela, Emma L. Bradshaw, Richard M. Ryan
Software Mentions: 9
Published: over 6 years ago
10.3389/fpls.2019.01717
Incorporating Local Adaptation Into Species Distribution Modeling of Paeonia mairei, an Endemic Plant to ChinaCited by: 27
Author(s): Qihang Chen, Yijia Yin, Rui Zhao, Yong Yang, Jaime A. Teixeira da Silva, Xiaonan Yu
Software Mentions: 9
Published: over 6 years ago
10.3390/insects12070639
Estimation of the Recent Expansion Rate of Ruspolia nitidula (Orthoptera) on a Regional and Landscape ScaleCited by: 3
Author(s): Oto Kaláb, Petr Pyszko, Petr Kočárek
Software Mentions: 9
Published: almost 5 years ago
10.1038/s41598-017-18927-1
Species Distribution Modelling: Contrasting presence-only models with plot abundance dataCited by: 107
Author(s): Vitor Hugo Freitas Gomes, Stéphanie D. IJff, Niels Raes, Iêda Leão do Amaral, Rafael de Paiva Salomão, Luiz de Souza Coêlho, Francisca Dionízia de Almeida Matos, Carolina V. Castilho, Diógenes de Andrade Lima Filho, Dairon Cárdenas López, Juan Ernesto Guevara, William E. Magnusson, Oliver L. Phillips, Florian Wittmann, Marcelo de Jesus Veiga Carim, Maria Pires Martins, Mariana Victória Irume, Daniel Sabatier, Jean‐François Molino, Olaf Bánki, José Renan da Silva Guimarães, Nigel C. A. Pitman, Maria Teresa Fernandez Piedade, Abel Monteagudo Mendoza, Bruno Garcia Luize, Eduardo Martins Venticinque, Evlyn Márcia Moraes de Leão Novo, Percy Núñez Vargas, Thiago Sanna Freire Silva, Ângelo Gilberto Manzatto, John Terborgh, Neidiane Farias Costa Reis, Juan Carlos Montero, Katia Regina Casula, Beatriz Schwantes Marimon, Ben‐Hur Marimon, Eurídice N. Honorio Coronado, Ted R. Feldpausch, Álvaro Duque, Charles E. Zartman, Nicolás Castaño Arboleda, Timothy J. Killeen, Bonifacio Mostacedo, Rodolfo Vásquez, Jochen Schöngart, Rafael Leandro de Assis, Marcelo Brilhante de Medeiros, Marcelo F. Simon, Ana Andrade, William F. Laurance, José Luís Camargo, Layon Oreste Demarchi, Susan G. Laurance, Emanuelle de Sousa Farias, Henrique E. M. Nascimento, Juan David Cardenas Revilla, Adriano Costa Quaresma, Flávia R. C. Costa, Ima Célia Guimarães Vieira, Bruno Barçante Ladvocat Cintra, Hernán Castellanos, Roel Brienen, Pablo R. Stevenson, Yuri Oliveira Feitosa, Joost F. Duivenvoorden, Gerardo A. Aymard C., Hugo F. Mogollón, Natália Targhetta, J. A. Comiskey, Alberto Vicentini, Aline Lopes, Gabriel Damasco, Nállarett Dávila, Roosevelt García‐Villacorta, Carolina Levis, Juliana Schietti, Priscila Souza, Thaíse Emilio, Alfonso Alonso, David Neill, Francisco Dallmeier, Leandro Valle Ferreira, Alejandro Araujo‐Murakami, Daniel Praia, Dário Dantas do Amaral, Fernanda Antunes Carvalho, Fernanda Coelho de Souza, Kenneth J. Feeley, Luzmila Arroyo, Marcelo Petratti Pansonato, Rogério Gribel, Boris Villa, Juan Carlos Licona, Paul V. A. Fine, Carlos Cerón, Christopher Baraloto, Eliana M. Jimenez, Juliana Stropp, Julien Engel, Marcos Silveira, M. C. Peñuela, Pascal Pétronelli, P.J.M. Maas, Raquel Thomas-Caesar, Terry W. Henkel, Doug Daly, Marcos Ríos Paredes, Tim R. Baker, Alfredo Fuentes, Carlos A. Peres, Jérôme Chave, Jose Luis Marcelo‐Peña, Kyle G. Dexter, Miles R. Silman, Peter M. Jørgensen, R. Toby Pennington, Anthony Di Fiore, Fernando Cornejo Valverde, Juan Fernando Phillips, Gonzalo Rivas‐Torres, Patricio von Hildebrand, Tinde van Andel, Ademir Roberto Ruschel, Adriana Prieto, Agustín Rudas, Bruce Hoffman, César I. A. Vela, Edelcílio Marques Barbosa, Egleé L. Zent, George Pepe Gallardo Gonzales, Hilda Paulette Dávila Doza, Íres Paula de Andrade Miranda, Jean-Louis Guillaumet, Linder Felipe Mozombite Pinto, Luiz Carlos de Matos Bonates, Natalino Silva, Ricardo Zárate Gómez, Stanford Zent, Therany Gonzales, Vincent Vos, Yadvinder Malhi, Alexandre Adalardo de Oliveira, Ángela Cano, Bianca Weiss Albuquerque, Corine Vriesendorp, Diego F. Correa, Emilio Vilanova Torre, Gregory van der Heijden, Hirma Ramírez‐Angulo, José Ferreira Ramos, Kenneth R. Young, Maíra da Rocha, Marcelo Trindade Nascimento, María Natalia Umaña Medina, Milton Tirado, Ophelia Wang, Rodrigo Sierra, Armando Torres‐Lezama, Casimiro Mendoza, Cid Ferreira, Cláudia Baider, Daniel Villarroel, Henrik Balslev, Italo Mesones, Ligia Estela Urrego Giraldo, Luisa Fernanda Casas, Manuel Augusto Ahuite Reategui, Reynaldo Linares-Palomino, Roderick Zagt, Sasha Cárdenas, William Farfán-Ríos, Adeilza Felipe Sampaio, Daniela Pauletto, Elvis H. Valderrama Sandoval, Freddy Ramírez Arévalo, Isau Huamantupa‐Chuquimaco, Karina García-Cabrera, Lionel Hernández, Luis Valenzuela Gamarra, Miguel Alexiades, Susamar Pansini, Walter Palacios Cuenca, William Milliken, Joana Ricardo, Gabriela Lopez‐Gonzalez, Edwin Pos, Hans ter Steege
Software Mentions: 9
Published: over 8 years ago
10.3389/fpsyg.2021.636129
Psychological Differences Among Healthcare Workers of a Rehabilitation Institute During the COVID-19 Pandemic: A Two-Step StudyCited by: 16
Author(s): Anna Panzeri, Silvia Rossi Ferrario, Paola Cerutti
Software Mentions: 9
Published: about 5 years ago
10.1186/s12866-021-02211-4
Microbiome characterization of defensive tissues in the model anemone Exaiptasia diaphanaCited by: 10
Author(s): Justin Maire, Linda L. Blackall, Madeleine J. H. van Oppen
Software Mentions: 9
Published: about 5 years ago
10.1371/journal.pone.0236856
The macroecology of the COVID-19 pandemic in the AnthropoceneCited by: 32
Author(s): Piotr Skórka, Beata Grzywacz, Dawid Moroń, Magdalena Lenda
Software Mentions: 9
Published: almost 6 years ago
10.1002/jgf2.349
Relationship between medical students’ career priority and specialty choice: A nationwide multicenter surveyCited by: 6
Author(s): Kenya Ie, Akiko Murata, Masao Tahara, Manabu Komiyama, Shuhei Ichikawa, Yousuke Takemura, Hirotaka Onishi
Software Mentions: 9
Published: about 6 years ago
10.1128/mSystems.00493-20
Exometabolite Dynamics over Stationary Phase Reveal Strain-Specific ResponsesCited by: 3
Author(s): John L. Chodkowski, Ashley Shade
Software Mentions: 9
Published: over 5 years ago
10.1186/s13059-021-02363-6
Multi-omic profiling of lung and liver tumor microenvironments of metastatic pancreatic cancer reveals site-specific immune regulatory pathwaysCited by: 24
Author(s): Won Jin Ho, Rossin Erbe, Ludmila Danilova, Zaw Phyo, Emma Bigelow, Genevieve Stein-O’Brien, Dwayne L. Thomas, Soren Charmsaz, Nicole Groß, Skylar Woolman, Kayla Cruz, Rebecca M Munday, Neeha Zaidi, Todd D. Armstrong, Marcelo B. Sztein, Mark Yarchoan, Elizabeth D. Thompson, Elizabeth M. Jaffee, Elana J. Fertig
Software Mentions: 9
Published: about 5 years ago
10.1371/journal.pone.0122717
Risk Factors for Whole Carcass Condemnations in the Swiss Slaughter Cattle PopulationCited by: 6
Author(s): Flavie Vial, Sara Schärrer, Martin Reist
Software Mentions: 9
Published: about 11 years ago
10.1186/s12983-016-0162-0
Evolution of body morphology and beak shape revealed by a morphometric analysis of 14 Paridae speciesCited by: 28
Author(s): Shimiao Shao, Quan Qing, Tianlong Cai, Gang Song, Yanhua Qu, Fumin Lei
Software Mentions: 9
Published: almost 10 years ago
10.7717/peerj.7155
Nature representation in South American protected areas: country contrasts and conservation prioritiesCited by: 16
Author(s): Germán Baldi, Santiago A. Schauman, Marcos Texeira, Sofía Marinaro, Osvaldo A. Martin, Patricia Gandini, Estéban G. Jobbágy
Software Mentions: 9
Published: almost 7 years ago
10.3390/ijms21134763
The Differential Effect of Carbon Dots on Gene Expression and DNA Methylation of Human Embryonic Lung Fibroblasts as a Function of Surface Charge and DoseCited by: 15
Author(s): Michal Šíma, Kristýna Vrbová, Táňa Závodná, K. Hoňková, Irena Chvojková, Antonín Ambrož, Jǐŕı Kléma, Andrea Rössnerová, Kateřina Poláková, Tomáš Malina, Jan Belza, Jan Topinka, Pavel Rőssner
Software Mentions: 9
Published: almost 6 years ago
10.1038/s41598-021-92648-4
Transmitting silks of maize have a complex and dynamic microbiomeCited by: 5
Author(s): Eman M. Khalaf, Anuja Shrestha, Jeffrey Rinne, Michael D. J. Lynch, Charles Shearer, Victor Limay-Rios, L. M. Reid, Manish N. Raizada
Software Mentions: 9
Published: about 5 years ago
10.1186/s12889-018-5041-5
Dairy product consumption and risk of hip fracture: a systematic review and meta-analysisCited by: 67
Author(s): Shanshan Bian, Junfeng Hu, Kai Zhang, Yunguo Wang, Miaohui Yu, Jie Ma
Software Mentions: 9
Published: over 8 years ago
10.1016/j.comppsych.2019.152143
Longitudinal population subgroups of CRP and risk of depression in the ALSPAC birth cohortCited by: 11
Author(s): Emanuele F. Osimo, Jan S̆tochl, Stanley Zammit, Glyn Lewis, Peter B. Jones, Golam M. Khandaker
Software Mentions: 9
Published: over 6 years ago
10.18632/aging.203379
Integration of segmented regression analysis with weighted gene correlation network analysis identifies genes whose expression is remodeled throughout physiological aging in mouse tissuesCited by: 8
Author(s): Margarida Ferreira, Stephany Francisco, Ana Raquel Soares, Ana Nobre, Miguel Pinheiro, Andreia Reis, Sonya Neto, Ana João Rodrigues, Nuno Sousa, Gabriela Moura, Manuel A. S. Santos
Software Mentions: 9
Published: almost 5 years ago
10.3390/ani11092708
Patterns of Exposure and Infection with Microparasites in Iberian Wild Carnivores: A Review and Meta-AnalysisCited by: 0
Author(s): Javier Millán, Daniel J. Becker
Software Mentions: 9
Published: almost 5 years ago
10.1038/s41598-020-60336-4
Linagliptin and telmisartan induced effects on renal and urinary exosomal miRNA expression in rats with 5/6 nephrectomyCited by: 18
Author(s): Denis Delić, Franziska Wiech, Richard Urquhart, Ogsen Gabrielyan, Kathrin Rieber, Marcel Rolser, Oleg Tsuprykov, Ahmed A. Hasan, Bernhard K. Krämer, Patrick Baum, A Köhler, Florian Gantner, Mark Michael, Berthold Hocher, Thomas Klein
Software Mentions: 9
Published: over 6 years ago
10.1186/s40478-019-0797-0
Extensive transcriptomic study emphasizes importance of vesicular transport in C9orf72 expansion carriersCited by: 36
Author(s): Dennis W. Dickson, Matthew Baker, Jazmyne L. Jackson, Mariely DeJesus-Hernandez, Ni Cole A. Finch, Shulan Tian, Michael G. Heckman, Cyril Pottier, Tania F. Gendron, Melissa E. Murray, Yingxue Ren, Joseph S. Reddy, Neill R. Graff‐Radford, Bradley F. Boeve, Ronald C. Petersen, David S. Knopman, Keith A. Josephs, Leonard Petrucelli, Björn Oskarsson, John W. Sheppard, Yan W. Asmann, Rosa Rademakers, Marka van Blitterswijk
Software Mentions: 9
Published: over 6 years ago
10.7554/eLife.28811
Sperm competition risk drives rapid ejaculate adjustments mediated by seminal fluidCited by: 32
Author(s): Michael Bartlett, Tammy E. Steeves, Neil J. Gemmell, Patrice Rosengrave
Software Mentions: 9
Published: over 8 years ago
10.1534/g3.120.401436
The Wheat GENIE3 Network Provides Biologically-Relevant Information in Polyploid WheatCited by: 18
Author(s): Sophie A Harrington, Anna E Backhaus, Ajit Singh, Keywan Hassani‐Pak, Cristóbal Uauy
Software Mentions: 9
Published: over 5 years ago
10.3389/fvets.2021.627894
Factors Affecting the Development of Bovine Respiratory Disease: A Cross-Sectional Study in Beef Steers Shipped From France to ItalyCited by: 14
Author(s): Barbara Padalino, Francesco Cirone, Martina Zappaterra, Daniele Tullio, Gigliola Ficco, Antonio Giustino, Linda Amarachi Ndiana, Annamaria Pratelli
Software Mentions: 9
Published: almost 5 years ago
10.3390/ijerph18020658
Spatial-Temporal Modelling of Disease Risk Accounting for PM2.5 Exposure in the Province of Pavia: An Area of the Po ValleyCited by: 3
Author(s): Leonardo Trivelli, Paola Borrelli, Ennio Cadum, Enrico Pisoni, Simona Villani
Software Mentions: 9
Published: over 5 years ago
10.3389/fpubh.2021.679406
The Mediating Role of Placental Weight Change in the Association Between Prenatal Exposure to Thallium and Birth Weight: A Prospective Birth Cohort StudyCited by: 4
Author(s): He Zhou, Xiangrong Sun, Yiding Wang, Yufeng Ye, Hanwei Chen, Qingsong Chen, Guanhao He, Jiaqi Wang, Xin Liu, Moran Dong, Dengzhou Chen, Guimin Chen, Lifang Yuan, Jianpeng Xiao, Jianxiong Hu, Weilin Zeng, Zuhua Rong, Qianqian Zhang, Mengya Zhou, Lingchuan Guo, Yanyun Lv, Jingjie Fan, Yudong Pu, Wenjun Ma, Bo Zhang, Tao Liu
Software Mentions: 9
Published: almost 5 years ago
10.1111/1744-7917.12606
The price of protection: a defensive endosymbiont impairs nymph growth in the bird cherry‐oat aphid, <i>Rhopalosiphum padi</i>Cited by: 30
Author(s): Daniel J. Leybourne, Jorunn I. B. Bos, Tracy A. Valentine, Alison J. Karley
Software Mentions: 9
Published: almost 8 years ago
10.1186/s13071-021-04678-6
A 3-year retrospective analysis of canine intestinal parasites: fecal testing positivity by age, U.S. geographical region and reason for veterinary visitCited by: 14
Author(s): Sarah Sweet, Evan Hegarty, Donald J. McCrann, Michael J. Coyne, Dave Kincaid, Donald Szlosek
Software Mentions: 9
Published: over 5 years ago
10.3390/v12111268
VIRIDIC—A Novel Tool to Calculate the Intergenomic Similarities of Prokaryote-Infecting VirusesCited by: 242
Author(s): Cristina Moraru, Arvind Varsani, Andrew M. Kropinski
Software Mentions: 9
Published: over 5 years ago
10.1186/s13073-021-00902-1
Integrative statistical analyses of multiple liquid biopsy analytes in metastatic breast cancerCited by: 16
Author(s): Corinna Keup, Vinay Suryaprakash, Siegfried Hauch, Markus Storbeck, Peter F. Hahn, Markus Sprenger-Haussels, Hans‐Christian Kolberg, Mitra Tewes, Oliver Hoffmann, Rainer Kimmig, Sabine Kasimir‐Bauer
Software Mentions: 9
Published: about 5 years ago
10.12688/f1000research.18236.1
BioHackathon 2015: Semantics of data for life sciences and reproducible researchCited by: 5
Author(s): Rutger A. Vos, Toshiaki Katayama, Hiroyuki Mishima, Shin Kawano, Seiichiro Kawashima, Jin-Dong Kim, Yuki Moriya, Toshiaki Tokimatsu, Atsuko Yamaguchi, Yasunori Yamamoto, Hongyan Wu, Peter Amstutz, Erick Antezana, Nobuyuki P. Aoki, Kazuharu Arakawa, Jerven Bolleman, Evan Bolton, Raoul J. P. Bonnal, Hidemasa Bono, Kees Burger, Hirokazu Chiba, K. Bretonnel Cohen, Eric W. Deutsch, Jesualdo Tomás Fernández‐Breis, Gang Fu, Takatomo Fujisawa, Atsushi Fukushima, Alexander García, Naohisa Goto, Tudor Groza, Colin Hercus, Robert Hoehndorf, Kotone Itaya, Nick Juty, Takeshi Kawashima, Jee-Hyub Kim, Akira R. Kinjo, Masaaki Kotera, Kouji Kozaki, Sadahiro Kumagai, Tatsuya Kushida, Thomas Lütteke, Masaaki Matsubara, Joe Miyamoto, Attayeb Mohsen, Hiroshi Mori, Yukiko Naito, Takeru Nakazato, Jeremy Nguyen-Xuan, Kozo Nishida, Naoki Nishida, Hiroyo Nishide, Soichi Ogishima, Toshio Ohta, Shujiro Okuda, Benedict Paten, Jean-Luc Perret, Philip Prathipati, Pjotr Prins, Núria Queralt-Rosiñach, Daisuke Shinmachi, Shinya Suzuki, Tsuyosi Tabata, Terue Takatsuki, Kieron Taylor, Mark Thompson, Ikuo Uchiyama, Bruno Miguel Vieira, Chih-Hsuan Wei, Mark D. Wilkinson, Issaku Yamada, Ryota Yamanaka, Kazutoshi Yoshitake, Akiyasu C. Yoshizawa, Michel Dumontier, Kenjiro Kosaki, Toshihisa Takagi
Software Mentions: 9
Published: over 6 years ago
10.1371/journal.pone.0212024
Spatial and temporal development of deltamethrin resistance in malaria vectors of the Anopheles gambiae complex from North CameroonCited by: 23
Author(s): Stanislas Mandeng, Herman Parfait Awono-Ambene, Jude D. Bigoga, Wolfgang Eyisap Ekoko, Achille Binyang, Michael Piameu, Lili Ranaise Mbakop, Betrand Nono Fesuh, Narcisse Mvondo, Raymond Tabue, Philippe Nwane, R. Mimpfoundi, Jean-Claude Toto, Immo Kleinschmidt, Tessa B. Knox, Abraham Mnzava, Martin J. Donnelly, Étienne Fondjo, Josiane Etang
Software Mentions: 9
Published: over 7 years ago
10.1371/journal.pone.0150547
Permissible Home Range Estimation (PHRE) in Restricted Habitats: A New Algorithm and an Evaluation for Sea OttersCited by: 36
Author(s): L. Max Tarjan, M. Tim Tinker
Software Mentions: 9
Published: over 10 years ago
10.1038/s41419-019-1775-y
A new bioavailable fenretinide formulation with antiproliferative, antimetabolic, and cytotoxic effects on solid tumorsCited by: 34
Author(s): Isabella Orienti, Federica Francescangeli, Maria Laura De Angelis, Katia Fecchi, Lucilla Bongiorno-Borbone, Michele Signore, Angelo Peschiaroli, Alessandra Boe, Alessandro Bruselles, Angelita Costantino, Adriana Eramo, Valentina Salvati, Giovanni Sette, Paola Contavalli, Lello Zolla, Toshihiko Oki, Toshio Kitamura, Massimo Spada, Alessandro Giuliani, Marta Baiocchi, Filippo La Torre, Gerry Melino, Marco Tartaglia, Ruggero De Maria, Ann Zeuner
Software Mentions: 9
Published: almost 7 years ago
10.1016/j.celrep.2020.108308
Developmental Gene Expression Differences between Humans and Mammalian ModelsCited by: 34
Author(s): Margarida Cardoso-Moreira, Ioannis Sarropoulos, Britta Velten, Matthew Mort, David Neil Cooper, Wolfgang Huber, Henrik Kaessmann
Software Mentions: 9
Published: over 5 years ago
10.1073/pnas.2104254118
Sequence of the supernumerary B chromosome of maize provides insight into its drive mechanism and evolutionCited by: 22
Author(s): Nicolas Blavet, Hua Yang, Handong Su, Pavel Solanský, Ryan N. Douglas, Miroslava Karafiátová, Lucie Šimková, Jing Zhang, Yalin Liu, Jie Hou, Xiaowen Shi, Chen Chen, Mohamed El-Walid, Morgan McCaw, Patrice S. Albert, Zhi Gao, Changzeng Zhao, Gil Ben-Zvi, Lior Glick, Guy Kol, Jinghua Shi, Jan Vrána, Hana Šimková, Jonathan C. Lamb, Kathleen J. Newton, R. Kelly Dawe, Jaroslav Doležel, Tieming Ji, Kobi Baruch, Fangpu Han, James A. Birchler, Jan Bartoš
Software Mentions: 9
Published: about 5 years ago
10.1371/journal.pone.0249102
The rodent object-in-context task: A systematic review and meta-analysis of important variablesCited by: 5
Author(s): Milou S. C. Sep, Marijn Vellinga, R. Angela Sarabdjitsingh, Marian Joëls
Software Mentions: 9
Published: almost 5 years ago
10.1177/2515841419835460
RNA-sequencing in ophthalmology research: considerations for experimental design and analysisCited by: 6
Author(s): Nicholas Owen, Mariya Moosajee
Software Mentions: 9
Published: over 7 years ago
10.1001/jamanetworkopen.2019.9812
Association of Severe Hyperoxemia Events and Mortality Among Patients Admitted to a Pediatric Intensive Care UnitCited by: 21
Author(s): Sriram Ramgopal, Cameron Dezfulian, Robert W. Hickey, Alicia K. Au, Shekhar T. Venkataraman, Robert S. B. Clark, Christopher M. Horvat
Software Mentions: 9
Published: almost 7 years ago
10.3389/fonc.2020.573141
Significance of Tumor Mutation Burden in Immune Infiltration and Prognosis in Cutaneous MelanomaCited by: 57
Author(s): Kai Kang, Fucun Xie, Jianshan Mao, Yi Bai, Xiang Wang
Software Mentions: 9
Published: almost 6 years ago
10.1155/2020/5069204
Dysregulated Expression and Methylation Analysis Identified TLX1NB as a Novel Recurrence Marker in Low-Grade GliomasCited by: 1
Author(s): Hongzhou Duan, Zuozhen Yang, Chen Li, Jiayong Zhang, Shengli Shen, Changwei Yuan, Yingjin Wang
Software Mentions: 9
Published: over 5 years ago
10.3389/fonc.2021.709210
Single-Cell Transcriptomics Reveals the Complexity of the Tumor Microenvironment of Treatment-Naive OsteosarcomaCited by: 45
Author(s): Yun Liu, Wei Feng, Yan Dai, Mengying Bao, Zhenchao Yuan, Mingwei He, Zhaojie Qin, Shijie Liao, Jun He, Qian Huang, Zhenyuan Yu, Yanyu Zeng, Binqian Guo, Rong Huang, Rongliang Yang, Yonghua Jiang, Jinling Liao, Zengming Xiao, Xinli Zhan, Chengsen Lin, Jiake Xu, Yu Ye, Jie Ma, Qingjun Wei, Zengnan Mo
Software Mentions: 9
Published: almost 5 years ago
10.3389/fpls.2014.00078
Plasma membrane lipid–protein interactions affect signaling processes in sterol-biosynthesis mutants in Arabidopsis thalianaCited by: 24
Author(s): Henrik Zauber, Asdrúbal Burgos, Prashanth Garapati, Waltraud X. Schulze
Software Mentions: 9
Published: over 12 years ago