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An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1186/s12859-020-03667-3

https://doi.org/10.1186/s12859-020-03667-3

Evaluating metagenomics tools for genome binning with real metagenomic datasets and CAMI datasets

Cited by: 49
Author(s): Yi Yue, Hao Huang, Qi Zhao, Huimin Dou, Xinyi Liu, Tian-Fei Han, Yue Chen, Xiangjun Song, Youhua Zhang, Jing Tu
Published: almost 5 years ago

Software Mentions 9

bioconductor: dada2
Accurate, high-resolution sample inference from amplicon sequencing data
Papers that mentioned: 274
Very Likely Science (100)
cran: minimap
Create Tile Grid Maps
Papers that mentioned: 47
Very Likely Science (75)
pypi: Binning-refiner
Binning_refiner
Papers that mentioned: 2
Very Likely Science (100)
pypi: Binsanity
Method to cluster contigs based a biphasic method with coverage and composition
Papers that mentioned: 4
Very Likely Science (75)
pypi: blast
a simple web-based, multi-platform music/mp3 player written in python, HTML/CSS and javascript
Papers that mentioned: 1,819
Very Likely Science (65)
pypi: bowtie
Interactive Dashboard Toolkit.
Papers that mentioned: 1,566
Very Likely Science (90)
pypi: bwa
Bwa: Simple Notification Sender(Discord, Slack, Gmail and Telegram)
Papers that mentioned: 989
Very Likely Science (65)
pypi: GroopM
Metagenomic binning suite
Papers that mentioned: 32
Very Likely Science (65)
pypi: minimap
"Generate minimaps of your code"
Papers that mentioned: 47
Very Likely Science (65)