Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pcbi.1008223

https://doi.org/10.1371/journal.pcbi.1008223

Causal network inference from gene transcriptional time-series response to glucocorticoids

Cited by: 15
Author(s): Jonathan Lu, Bianca Dumitrascu, Ian C. McDowell, Brian Jo, Alejandro Barrera, Linda K. Hong, Sarah M. Leichter, Timothy E. Reddy, Barbara E. Engelhardt
Published: almost 4 years ago

Software Mentions 9

bioconductor: edgeR

Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568

bioconductor: GENIE3

GEne Network Inference with Ensemble of trees
Papers that mentioned: 172

cran: BETS

Brazilian Economic Time Series
Papers that mentioned: 8

cran: MatrixEQTL

Matrix eQTL: Ultra Fast eQTL Analysis via Large Matrix Operations
Papers that mentioned: 81

cran: nsgp

Non-Stationary Gaussian Process Regression
Papers that mentioned: 2

pypi: conda

OS-agnostic, system-level binary package manager.
Papers that mentioned: 92

pypi: matplotlib

Python plotting package
Papers that mentioned: 1,045

pypi: PACE

Data Quality of Experimental Data
Papers that mentioned: 13,779

pypi: py

library with cross-python path, ini-parsing, io, code, log facilities
Papers that mentioned: 403