Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-020-02141-w

https://doi.org/10.1186/s13059-020-02141-w

Cited by: 61
Author(s): Umberto Palatini, Reem A. Masri, Luciano V. Cosme, Sergey Koren, Françoise Thibaud‐Nissen, James K. Biedler, Flávia Krsticevic, J. Spencer Johnston, Rebecca Halbach, Jacob E. Crawford, Igor Antoshechkin, Anna‐Bella Failloux, Elisa Pischedda, Michele Marconcini, Jay Ghurye, Arang Rhie, Atashi Sharma, Д. А. Карагодин, James Jenrette, Stephanie Gamez, Pascal Miesen, Patrick Masterson, Adalgisa Caccone, Maria V. Sharakhova, Zhijian Tu, Philippos Aris Papathanos, Ronald P. van Rij, Omar S. Akbari, Jeffrey R. Powell, Adam M. Phillippy, Mariangela Bonizzoni
Published: over 3 years ago

Software Mentions 9

bioconductor: Sushi
Papers that mentioned: 18
cran: fasta
Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: qqman
Q-Q and Manhattan Plots for GWAS Data
Papers that mentioned: 273
pypi: Archive
Simple library that provides a common interface for extracting zip and tar archives.
Papers that mentioned: 363
pypi: bowtie
Interactive Dashboard Toolkit.
Papers that mentioned: 1,566
pypi: custom
Custom self carry
Papers that mentioned: 1,363
pypi: fasta
The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848
pypi: qqman
Draws Manhattan plot and QQ plot using plink assoc output.
Papers that mentioned: 273