Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0226694

https://doi.org/10.1371/journal.pone.0226694

AlleleProfileR: A versatile tool to identify and profile sequence variants in edited genomes

Cited by: 4
Author(s): Arne A.N. Bruyneel, Alexandre R. Colas, Ioannis Karakikes, Mark Mercola
Published: almost 5 years ago

Software Mentions 9

bioconductor: CrispRVariants
Tools for counting and visualising mutations in a target location
Papers that mentioned: 18
cran: config
Manage Environment Specific Configuration Values
Papers that mentioned: 33
cran: fasta
Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848
cran: matlab
'MATLAB' Emulation Package
Papers that mentioned: 666
cran: Rcpp
Seamless R and C++ Integration
Papers that mentioned: 152
pypi: config
A hierarchical, easy-to-use, powerful configuration module for Python
Papers that mentioned: 33
pypi: CRISPResso
Software pipeline for the analysis of CRISPR-Cas9 genome editing outcomes from deep sequencing data
Papers that mentioned: 43
pypi: fasta
The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848
pypi: matlab
Matlab for python
Papers that mentioned: 666