cran: config | Projects | Ecosyste.ms: Papers

10.3390/ijms21186652

Identification of Gastritis Subtypes by Convolutional Neuronal Networks on Histological Images of Antrum and Corpus Biopsies
Cited by: 15
Author(s): Georg Steinbuß, Katharina Kriegsmann, Mark Kriegsmann
Software Mentions: 19
Published: over 4 years ago

10.3390/cancers13102419

Deep Learning for the Classification of Non-Hodgkin Lymphoma on Histopathological Images
Cited by: 16
Author(s): Georg Steinbuß, Mark Kriegsmann, Christiane Zgorzelski, Alexander Brobeil, Benjamin Goeppert, Sascha Dietrich, Gunhild Mechtersheimer, Katharina Kriegsmann
Software Mentions: 18
Published: over 3 years ago

10.3390/ijms22105385

Deep Learning in Pancreatic Tissue: Identification of Anatomical Structures, Pancreatic Intraepithelial Neoplasia, and Ductal Adenocarcinoma
Cited by: 15
Author(s): Mark Kriegsmann, Katharina Kriegsmann, Georg Steinbuß, Christiane Zgorzelski, Anne Kraft, Matthias M. Gaida
Software Mentions: 18
Published: over 3 years ago

10.1186/s12859-019-3251-1

BISR-RNAseq: an efficient and scalable RNAseq analysis workflow with interactive report generation
Cited by: 17
Author(s): Venkat Sundar Gadepalli, Hatice Gülçin Özer, Ayse Selen Yilmaz, Maciej Pietrzak, Amy Webb
Software Mentions: 13
Published: about 5 years ago

10.3389/fgene.2020.489357

Cascabel: A Scalable and Versatile Amplicon Sequence Data Analysis Pipeline Delivering Reproducible and Documented Results
Cited by: 13
Author(s): Alejandro Abdala Asbun, Marc Besseling, Sergio Balzano, Judith van Bleijswijk, Harry J. Witte, Laura Villanueva, Julia C. Engelmann
Software Mentions: 11
Published: about 4 years ago

10.1371/journal.pone.0209358

QuantumInformation.jl—A Julia package for numerical computation in quantum information theory
Cited by: 11
Author(s): Piotr Gawron, Dariusz Kurzyk, Łukasz Pawela
Software Mentions: 10
Published: about 6 years ago

10.1371/journal.pone.0226694

AlleleProfileR: A versatile tool to identify and profile sequence variants in edited genomes
Cited by: 4
Author(s): Arne A.N. Bruyneel, Alexandre R. Colas, Ioannis Karakikes, Mark Mercola
Software Mentions: 9
Published: about 5 years ago

10.1186/s12859-019-3087-8

PyBDA: a command line tool for automated analysis of big biological data sets
Cited by: 3
Author(s): Simon Dirmeier, Mario Emmenlauer, Christoph Dehio, Niko Beerenwinkel
Software Mentions: 8
Published: about 5 years ago

10.1371/journal.pcbi.1007696

The SONATA data format for efficient description of large-scale network models
Cited by: 26
Author(s): Kael Dai, Juan Hernando, Yazan N. Billeh, Sergey L. Gratiy, Judit Planas, Andrew P. Davison, Salvador Dura‐Bernal, Padraig Gleeson, Adrien Devresse, Benjamin Dichter, Michael Gevaert, James G. King, Werner A. H. Van Geit, Arseny V. Povolotsky, Eilif Müller, Jean-Denis Courcol, Anton Arkhipov
Software Mentions: 8
Published: almost 5 years ago

10.3389/fgene.2017.00013

The Pancreatic Islet Regulome Browser
Cited by: 28
Author(s): Loris Mularoni, Mireia Ramos-Rodríguez, Lorenzo Pasquali
Software Mentions: 6
Published: almost 8 years ago

10.1186/s40638-016-0056-9

A motion sensing-based framework for robotic manipulation
Cited by: 7
Author(s): Hao Deng, Zeyang Xia, Shaokui Weng, Yangzhou Gan, Fang Peng, Jing Xiong
Software Mentions: 6
Published: about 8 years ago

10.1186/s12859-018-2330-z

outbreaker2: a modular platform for outbreak reconstruction
Cited by: 50
Author(s): Finlay Campbell, Xavier Didelot, Richard G. FitzJohn, Neil Ferguson, Anne Cori, Thibaut Jombart
Software Mentions: 6
Published: about 6 years ago

10.1186/1471-2105-13-154

TAPDANCE: An automated tool to identify and annotate transposon insertion CISs and associations between CISs from next generation sequence data
Cited by: 50
Author(s): Aaron L. Sarver, Jesse Erdman, Timothy K. Starr, David A. Largaespada, Kevin A.T. Silverstein
Software Mentions: 6
Published: over 12 years ago

10.1186/s13059-021-02486-w

PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation
Cited by: 23
Author(s): Medhat Mahmoud, Harshavardhan Doddapaneni, Winston Timp, Fritz J. Sedlazeck
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pone.0044514

Bipartite Graphs as Models of Population Structures in Evolutionary Multiplayer Games
Cited by: 28
Author(s): Jorge Peña, Yannick Rochat
Software Mentions: 5
Published: over 12 years ago

10.3390/jimaging7020019

Deep Learning for Brain Tumor Segmentation: A Survey of State-of-the-Art
Cited by: 69
Author(s): Tirivangani Magadza, Serestina Viriri
Software Mentions: 5
Published: almost 4 years ago

10.1038/s41597-020-0460-4

Reactants, products, and transition states of elementary chemical reactions based on quantum chemistry
Cited by: 63
Author(s): Colin A. Grambow, Lagnajit Pattanaik, William Green
Software Mentions: 4
Published: over 4 years ago

10.3389/fnins.2018.00236

Computational Testing for Automated Preprocessing 2: Practical Demonstration of a System for Scientific Data-Processing Workflow Management for High-Volume EEG
Cited by: 8
Author(s): Benjamin Ultan Cowley, Jussi Korpela
Software Mentions: 4
Published: over 6 years ago

10.3390/s19224905

Microservice Security Agent Based On API Gateway in Edge Computing
Cited by: 24
Author(s): Rongxu Xu, Wenquan Jin, Do‐Hyeun Kim
Software Mentions: 4
Published: about 5 years ago

10.1093/gigascience/gix042

Kronos: a workflow assembler for genome analytics and informatics
Cited by: 5
Author(s): Mohammad Jafar Taghiyar, Jamie Rosner, Diljot Grewal, Bruno M. Grande, Radhouane Aniba, Jasleen K. Grewal, Paul C. Boutros, Ryan D. Morin, Ali Bashashati, Sohrab P. Shah
Software Mentions: 4
Published: over 7 years ago

10.1371/journal.pone.0231083

Geology and climate influence rhizobiome composition of the phenotypically diverse tropical tree Tabebuia heterophylla
Cited by: 4
Author(s): Yakshi Ortiz, Carla Restrepo, Brayan Vilanova-Cuevas, Eugenio Santiago‐Valentín, Susannah G. Tringe, Filipa Godoy-Vitorino
Software Mentions: 4
Published: over 4 years ago

10.3389/frobt.2021.618866

Robotic Telemedicine for Mental Health: A Multimodal Approach to Improve Human-Robot Engagement
Cited by: 19
Author(s): Maria R. Lima, Maitreyee Wairagkar, Nirupama Natarajan, Sridhar Vaitheswaran, Ravi Vaidyanathan
Software Mentions: 3
Published: almost 4 years ago

10.1186/s13007-020-00602-8

DiSCount: computer vision for automated quantification of Striga seed germination
Cited by: 9
Author(s): Raul Masteling, Lodewijk Voorhoeve, Joris IJsselmuiden, Francisco Dini‐Andreote, Wietse de Boer, Jos M. Raaijmakers
Software Mentions: 3
Published: over 4 years ago

10.1371/journal.pone.0204265

Duplex Proximity Sequencing (Pro-Seq): A method to improve DNA sequencing accuracy without the cost of molecular barcoding redundancy
Cited by: 13
Author(s): Joel Pel, Wendy W. Y. Choi, Amy Leung, Gosuke Shibahara, Laura Gelinas, Milenko Despotovic, W. Lloyd Ung, Andre Marziali
Software Mentions: 3
Published: about 6 years ago

10.1016/j.dib.2019.104729

Data and replication supplement for double auction markets with snipers
Cited by: 0
Author(s): Paul J. Brewer, Anmol Ratan
Software Mentions: 3
Published: about 5 years ago

10.3390/s20185109

A New Roadway Eventual Obstacle Detection System Based on Computer Vision
Cited by: 0
Author(s): Mariano González-de-Soto, Rocío Mora, José Antonio Martín-Jiménez, Diego González Aguilera
Software Mentions: 3
Published: over 4 years ago

10.3390/toxins10120503

Discovery of Novel Conotoxin Candidates Using Machine Learning
Cited by: 18
Author(s): Qing Li, Maren Watkins, Samuel D. Robinson, Helena Safavi-Hemami, Mark Yandell
Software Mentions: 3
Published: about 6 years ago

10.1186/s13104-015-1027-x

Fastq2vcf: a concise and transparent pipeline for whole-exome sequencing data analyses
Cited by: 13
Author(s): Xiaoyi Gao, Jianpeng Xu, Joshua Starmer
Software Mentions: 2
Published: almost 10 years ago

10.3390/s21113638

SCARE: A Novel Switching and Collision Avoidance pRocEss for Connected Vehicles Using Virtualization and Edge Computing Paradigm
Cited by: 3
Author(s): Mauro Tropea, Floriano De Rango, Nicolas Nevigato, Luigi Bitonti, Francesco Pupo
Software Mentions: 2
Published: over 3 years ago

Ecosyste.ms: Papers

Projects: cran: config

Papers Mentioning config 33