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Papers: 10.1186/s12859-019-3251-1

https://doi.org/10.1186/s12859-019-3251-1

BISR-RNAseq: an efficient and scalable RNAseq analysis workflow with interactive report generation

Cited by: 17
Author(s): Venkat Sundar Gadepalli, Hatice Gülçin Özer, Ayse Selen Yilmaz, Maciej Pietrzak, Amy Webb
Published: over 5 years ago

Software Mentions 13

bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
Very Likely Science (78)
cran: config
Manage Environment Specific Configuration Values
Papers that mentioned: 33
Very Likely Science (77)
cran: packrat
A Dependency Management System for Projects and their R Package Dependencies
Papers that mentioned: 7
Very Likely Science (83)
cran: pbs
Periodic B Splines
Papers that mentioned: 3
Very Likely Science (75)
cran: shiny
Web Application Framework for R
Papers that mentioned: 127
Very Likely Science (100)
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
Very Likely Science (100)
pypi: config
A hierarchical, easy-to-use, powerful configuration module for Python
Papers that mentioned: 33
Very Likely Science (65)
pypi: display
simple printer of nested list
Papers that mentioned: 21
Very Likely Science (65)
pypi: packrat
A server and Django storage backend for files you already have.
Papers that mentioned: 7
Very Likely Science (65)
pypi: pbs
A package to prevent Dependency Confusion attacks against Yandex.
Papers that mentioned: 3
Very Likely Science (65)
pypi: picard
The next generation MusicBrainz tagger
Papers that mentioned: 243
Very Likely Science (65)
pypi: RSeQC
RNA-seq QC Package
Papers that mentioned: 366
Very Likely Science (80)
pypi: shiny
A web development framework for Python.
Papers that mentioned: 127
Very Likely Science (100)