Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: packrat
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/packrat
A Dependency Management System for Projects and their R Package
Dependencies
24 versions
Latest release: about 1 year ago
7 dependent packages
54,809 downloads last month
Papers Mentioning packrat 7
10.12688/f1000research.20843.1
Creating and sharing reproducible research code the workflowr wayCited by: 51
Author(s): John Blischak, Peter Carbonetto, Matthew Stephens
Software Mentions: 22
Published: almost 5 years ago
10.1186/s12859-019-3251-1
BISR-RNAseq: an efficient and scalable RNAseq analysis workflow with interactive report generationCited by: 17
Author(s): Venkat Sundar Gadepalli, Hatice Gülçin Özer, Ayse Selen Yilmaz, Maciej Pietrzak, Amy Webb
Software Mentions: 13
Published: almost 5 years ago
10.12688/wellcomeopenres.14754.2
ICR142 Benchmarker: evaluating, optimising and benchmarking variant calling performance using the ICR142 NGS validation seriesCited by: 0
Author(s): Elise Ruark, Esty Holt, Anthony Renwick, Márton Münz, Matthew N. Wakeling, Sian Ellard, Shazia Mahamdallie, Shawn Yost, Nazneen Rahman
Software Mentions: 5
Published: almost 6 years ago
10.1111/bij.12701
A cautionary note on the use of Ornstein Uhlenbeck models in macroevolutionary studiesCited by: 222
Author(s): Natalie Cooper, Gavin H. Thomas, Chris Venditti, Andrew Meade, Robert P. Freckleton
Software Mentions: 4
Published: almost 9 years ago
10.1016/j.patter.2020.100103
Tackling the Challenges of 21st-Century Open Science and Beyond: A Data Science Lab ApproachCited by: 8
Author(s): Michael Hollaway, Graham Dean, Gordon S. Blair, Mark Brown, Peter A. Henrys, John Watkins
Software Mentions: 3
Published: about 4 years ago
10.1038/sdata.2017.69
A database of georeferenced nutrient chemistry data for mountain lakes of the Western United StatesCited by: 7
Author(s): Jason Williams, Stephanie Labou
Software Mentions: 2
Published: over 7 years ago
10.1186/s13643-018-0709-6
Evaluating characteristics of PROSPERO records as predictors of eventual publication of non-Cochrane systematic reviews: a meta-epidemiological study protocolCited by: 12
Author(s): Juan Ruano, Francisco Gómez-García, Jesús Gay-Mimbrera, Macarena Aguilar-Luque, José Luis Fernández-Rueda, Jesús Fernández-Chaichio, Patricia Alcalde‐Mellado, P.J. Carmona-Fernández, Juan Luís Sanz-Cabanillas, Isabel Viguera-Guerra, F Franco-García, Manuel Jesús Cárdenas-Aranzana, José Luís Hernández Romero, Marcelino González-Padilla, Beatriz Isla-Tejera, Antonio Vélez García-Nieto
Software Mentions: 2
Published: over 6 years ago