Papers: 10.20900/immunometab20210022

https://doi.org/10.20900/immunometab20210022

Meta-Analysis of Smooth Muscle Lineage Transcriptomes in Atherosclerosis and Their Relationships to In Vitro Models

Cited by: 21
Author(s): Austin C. Conklin, Hitoo Nishi, Florencia Schlamp, Tiit Örd, Kadri Õunap, Minna U. Kaikkonen, Edward A. Fisher, Casey E. Romanoski
Published: over 5 years ago

Software Mentions 9

bioconductor: DESeq2
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A compact modular conf/web/console framework.
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