Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

pypi: aea
Autonomous Economic Agent framework
Papers that mentioned: 1
pypi: aedat
A fast AEDAT4 decoder with an underlying Rust implementation
Papers that mentioned: 1
cran: AEDForecasting
Change Point Analysis in ARIMA Forecasting
Papers that mentioned: 1
pypi: AEI
Arimaa Engine Interface tools
Papers that mentioned: 1
pypi: aenet

Papers that mentioned: 1
pypi: Aeon
A toolkit for conducting machine learning tasks with time series data
Papers that mentioned: 4
cran: AEP
Statistical Modelling for Asymmetric Exponential Power Distribution
Papers that mentioned: 21
pypi: aequitas
The bias and fairness audit toolkit.
Papers that mentioned: 1
pypi: aer
A CLI helper for using EMR on AWS
Papers that mentioned: 2
cran: AER
Applied Econometrics with R
Papers that mentioned: 63
pypi: aerpy
a python library for reading ".aedat" format for event-camera logs.
Papers that mentioned: 1
pypi: aes
A simple tool for AES(Advanced Encryption Standard)
Papers that mentioned: 1
pypi: af
Af format tools
Papers that mentioned: 4
cran: AF
Model-Based Estimation of Confounder-Adjusted Attributable Fractions
Papers that mentioned: 106
pypi: AFE
Accelerometer Feature Extractor
Papers that mentioned: 16
pypi: AFEM
A Finite Element Python implementation
Papers that mentioned: 10
cran: afex
Analysis of Factorial Experiments
Papers that mentioned: 176
bioconductor: affxparser
Affymetrix File Parsing SDK
Papers that mentioned: 13
bioconductor: affy
Methods for Affymetrix Oligonucleotide Arrays
Papers that mentioned: 989
bioconductor: affycomp
Graphics Toolbox for Assessment of Affymetrix Expression Measures
Papers that mentioned: 13
bioconductor: affycoretools
Functions useful for those doing repetitive analyses with Affymetrix GeneChips
Papers that mentioned: 36
bioconductor: affyILM
Linear Model of background subtraction and the Langmuir isotherm
Papers that mentioned: 2
bioconductor: affyio
Tools for parsing Affymetrix data files
Papers that mentioned: 5
bioconductor: affylmGUI
GUI for limma Package with Affymetrix Microarrays
Papers that mentioned: 30
bioconductor: affyPara
Papers that mentioned: 2
bioconductor: affyPLM
Methods for fitting probe-level models
Papers that mentioned: 162
bioconductor: AffyRNADegradation
Analyze and correct probe positional bias in microarray data due to RNA degradation
Papers that mentioned: 6
pypi: aflow
Python API for searching AFLOW database.
Papers that mentioned: 1
cran: AFM
Atomic Force Microscope Image Analysis
Papers that mentioned: 137
pypi: AFQ-Browser

Papers that mentioned: 2
pypi: Africa
It's just a name snipe.
Papers that mentioned: 10
pypi: ag
AlgoLib Project
Papers that mentioned: 1
pypi: aga
aga grades assignments
Papers that mentioned: 1
pypi: agal

Papers that mentioned: 1
pypi: agalma
An automated phylogenomics pipeline.
Papers that mentioned: 2
pypi: agave
Rest_api
Papers that mentioned: 6
cran: AGD
Analysis of Growth Data
Papers that mentioned: 13
pypi: age
Actually good encryption. In Python.
Papers that mentioned: 1
cran: aGE
Adaptive Set-Based Gene-Environment Interaction Test for Rare Variants
Papers that mentioned: 1
pypi: agent
Async generators for humans
Papers that mentioned: 3
pypi: agentMET4FOF
A software package for the integration of metrological input into an agent-based system for the consideration of measurement uncertainty in current industrial manufacturing processes.
Papers that mentioned: 1
pypi: agg
Aggregate CSV files
Papers that mentioned: 3
pypi: aggr
Automate feature aggregation
Papers that mentioned: 3
pypi: aggregate
Tools for creating and working with aggregate probability distributions.
Papers that mentioned: 1
cran: aggregation
p-Value Aggregation Methods
Papers that mentioned: 1
pypi: aggregation

Papers that mentioned: 1
pypi: Aggregator
Aggregation of data from high to coarse resolution.
Papers that mentioned: 6
pypi: Aggrescan3D
Aggrescan3D - protein aggregation analysis standalone application
Papers that mentioned: 12
cran: AGHmatrix
Relationship Matrices for Diploid and Autopolyploid Species
Papers that mentioned: 11
pypi: agile
A meta-package containing a full toolset for agile development with TDD
Papers that mentioned: 1
bioconductor: agilp
Agilent expression array processing package
Papers that mentioned: 3
bioconductor: AgiMicroRna
Processing and Differential Expression Analysis of Agilent microRNA chips
Papers that mentioned: 37
pypi: AGL
Papers that mentioned: 9
pypi: agnes
AGNES - Flexible Reinforcement Learning Framework with PyTorch
Papers that mentioned: 8
cran: agRee
Various Methods for Measuring Agreement
Papers that mentioned: 5
pypi: Agree
Simple argument resolution.
Papers that mentioned: 1
cran: agricolae
Statistical Procedures for Agricultural Research
Papers that mentioned: 260
cran: agridat
Agricultural Datasets
Papers that mentioned: 1
cran: agrmt
Calculate Concentration and Dispersion in Ordered Rating Scales
Papers that mentioned: 1
pypi: aha
aha is a web application framework specialized for Google App Engine.
Papers that mentioned: 1
cran: AHM
Additive Heredity Model: Method for the Mixture-of-Mixtures Experiments
Papers that mentioned: 1
cran: AHMbook
Functions and Data for the Book 'Applied Hierarchical Modeling in Ecology' Vols 1 and 2
Papers that mentioned: 1
pypi: AHRS
Attitude and Heading Reference Systems.
Papers that mentioned: 26
pypi: ai
Ai lib.
Papers that mentioned: 16
pypi: A.I
TDC PROJETOS
Papers that mentioned: 1
cran: AICcmodavg
Model Selection and Multimodel Inference Based on (Q)AIC(c)
Papers that mentioned: 261
pypi: AICON
This is the AICON module.
Papers that mentioned: 1
pypi: AICS
Papers that mentioned: 3
pypi: aid
library and scripts for interacting with ISP AID list
Papers that mentioned: 2
cran: AID
Box-Cox Power Transformation
Papers that mentioned: 31
pypi: aida
Papers that mentioned: 2
pypi: AIDE
AguaClara Infrastructure Design Engine
Papers that mentioned: 14
cran: AIG
Automatic Item Generator
Papers that mentioned: 4
pypi: AIGO
Analysis and Inter-comparison of Gene Ontology functional annotations
Papers that mentioned: 3
pypi: aikido
Python library TBA
Papers that mentioned: 1
pypi: aiml
An interpreter package for AIML, the Artificial Intelligence Markup Language
Papers that mentioned: 1
pypi: AIMM
Artificial intelligence model manager
Papers that mentioned: 6
bioconductor: AIMS
AIMS : Absolute Assignment of Breast Cancer Intrinsic Molecular Subtype
Papers that mentioned: 77
pypi: aiocoap
Python CoAP library
Papers that mentioned: 1
pypi: aiohttp
Async http client/server framework (asyncio)
Papers that mentioned: 1
pypi: Aion

Papers that mentioned: 1
pypi: aiotg
Asynchronous Python API for building Telegram bots
Papers that mentioned: 1
cran: AIPW
Augmented Inverse Probability Weighting
Papers that mentioned: 11
pypi: air
An ultra-lightweight static site generator.
Papers that mentioned: 2
cran: airGR
Suite of GR Hydrological Models for Precipitation-Runoff Modelling
Papers that mentioned: 1
pypi: airpg
A package to automatically access the inverted repeats of archived plastid genomes
Papers that mentioned: 1
pypi: AirStrip
Third-party js dependencies manager
Papers that mentioned: 1
cran: aiRthermo
Atmospheric Thermodynamics and Visualization
Papers that mentioned: 1
pypi: AJAS
Lightweight REST Sever framework, based on bottle
Papers that mentioned: 1
cran: akima
Interpolation of Irregularly and Regularly Spaced Data
Papers that mentioned: 29
pypi: akima
Akima Interpolation
Papers that mentioned: 29
pypi: akkadian
Translating Akkadian signs to transliteration using NLP algorithms
Papers that mentioned: 1
pypi: Akvo
Surface nuclear magnetic resonance workbench
Papers that mentioned: 2
cran: alabama
Constrained Nonlinear Optimization
Papers that mentioned: 1
pypi: alabama
A small and simple python orm to connect with postgresql database.
Papers that mentioned: 1
pypi: aladin
Analysis of large-dimensional data in neuroscience
Papers that mentioned: 1
pypi: alakazam
Functional programming sugar for Python
Papers that mentioned: 6
cran: alakazam
Immunoglobulin Clonal Lineage and Diversity Analysis
Papers that mentioned: 6
pypi: albatradis
Comparitive transposon mutagenesis experiment analysis
Papers that mentioned: 1
cran: albopictus
Age-Structured Population Dynamics Model
Papers that mentioned: 2