Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

pypi: acpype
ACPYPE - AnteChamber PYthon Parser interfacE
Papers that mentioned: 32
pypi: acq4
Neurophysiology acquisition and analysis platform
Papers that mentioned: 2
pypi: acquire
A tool to quickly gather forensic artifacts from disk images or a live system into a lightweight container
Papers that mentioned: 1
pypi: Acquisition
Acquisition is a mechanism that allows objects to obtain attributes from the containment hierarchy they're in.
Papers that mentioned: 72
cran: acs
Download, Manipulate, and Present American Community Survey and Decennial Data from the US Census
Papers that mentioned: 1
pypi: acs
Azure Container Service command line tools
Papers that mentioned: 1
pypi: ACSNI
automatic context-specific network inference
Papers that mentioned: 1
cran: act
Aligned Corpus Toolkit
Papers that mentioned: 6
pypi: act

Papers that mentioned: 6
cran: ActCR
Extract Circadian Rhythms Metrics from Actigraphy Data
Papers that mentioned: 2
pypi: actigraph
A library to convert raw accelerometer data to ActiGraph-like "counts".
Papers that mentioned: 3
pypi: actin
Activity Indices Calculator
Papers that mentioned: 2
pypi: action
A command-line parser you won't hate
Papers that mentioned: 1
pypi: ACTIONet
ACTIONet single-cell analysis framework
Papers that mentioned: 2
pypi: activation
activation function for machine learning
Papers that mentioned: 1
pypi: active
Simple Microservice Application Runtime Toolkit
Papers that mentioned: 2
cran: ActiveDriver
Finding Cancer Driver Proteins with Enriched Mutations in Post-Translational Modification Sites
Papers that mentioned: 29
cran: ActiveDriverWGS
A Driver Discovery Tool for Cancer Whole Genomes
Papers that mentioned: 4
cran: ActivePathways
Integrative Pathway Enrichment Analysis of Multivariate Omics Data
Papers that mentioned: 3
cran: activity
Animal Activity Statistics
Papers that mentioned: 5
pypi: activity

Papers that mentioned: 5
cran: ActivityIndex
Activity Index Calculation using Raw 'Accelerometry' Data
Papers that mentioned: 1
pypi: ActivityTracker
Task and time logging
Papers that mentioned: 2
cran: activPAL
Advanced Processing and Chart Generation from activPAL Events Files
Papers that mentioned: 144
pypi: actiwatch
Actiwatch is a Python module built for interacting with Philips Actiwatch actigraphy devices.
Papers that mentioned: 7
cran: actuar
Actuarial Functions and Heavy Tailed Distributions
Papers that mentioned: 3
pypi: ACU
Automatically update AWS credentials file.
Papers that mentioned: 1
cran: AcuityView
A Package for Displaying Visual Scenes as They May Appear to an Animal with Lower Acuity
Papers that mentioned: 2
cran: ada
The R Package Ada for Stochastic Boosting
Papers that mentioned: 13
pypi: Ada
Better living with Python scripts & libraries.
Papers that mentioned: 48
cran: adabag
Applies Multiclass AdaBoost.M1, SAMME and Bagging
Papers that mentioned: 16
pypi: adam
Adam programming language implemented in python
Papers that mentioned: 12
bioconductor: ADAM
ADAM: Activity and Diversity Analysis Module
Papers that mentioned: 482
pypi: adapt
Awesome Domain Adaptation Python Toolbox for Tensorflow and Scikit-learn
Papers that mentioned: 5
pypi: adaptation
Awesome Domain Adaptation Package Toolbox for Tensorflow and Scikit-learn
Papers that mentioned: 2
pypi: adapter

Papers that mentioned: 3
cran: AdaptFitOS
Adaptive Semiparametric Additive Regression with Simultaneous Confidence Bands and Specification Tests
Papers that mentioned: 1
cran: AdaptGauss
Gaussian Mixture Models (GMM)
Papers that mentioned: 7
pypi: adaptive
Parallel active learning of mathematical functions
Papers that mentioned: 9
cran: adaptiveGPCA
Adaptive Generalized PCA
Papers that mentioned: 2
pypi: AdaptivePELE
Enhanced sampling of molecular simulations
Papers that mentioned: 1
cran: adaptivetau
Tau-Leaping Stochastic Simulation
Papers that mentioned: 10
cran: adaptMCMC
Implementation of a Generic Adaptive Monte Carlo Markov Chain Sampler
Papers that mentioned: 1
cran: adaptMT
Adaptive P-Value Thresholding for Multiple Hypothesis Testing with Side Information
Papers that mentioned: 1
cran: ADAPTS
Automated Deconvolution Augmentation of Profiles for Tissue Specific Cells
Papers that mentioned: 6
cran: AdaSampling
Adaptive Sampling for Positive Unlabeled and Label Noise Learning
Papers that mentioned: 1
pypi: adb
A pure python implementation of the Android ADB and Fastboot protocols
Papers that mentioned: 2
pypi: adcc
adcc: Seamlessly connect your host program to ADC
Papers that mentioned: 1
pypi: ADCT
A python package capable of performing and illustrating a few clustering methods.
Papers that mentioned: 2
cran: ADCT
Adaptive Design in Clinical Trials
Papers that mentioned: 2
pypi: add
UNKNOWN
Papers that mentioned: 7
cran: addreg
Additive Regression for Discrete Data
Papers that mentioned: 2
pypi: ade
Asynchronous Differential Evolution, with efficient multiprocessing.
Papers that mentioned: 6
cran: ade4
Analysis of Ecological Data: Exploratory and Euclidean Methods in Environmental Sciences
Papers that mentioned: 809
cran: ade4TkGUI
'ade4' Tcl/Tk Graphical User Interface
Papers that mentioned: 11
cran: adegenet
Exploratory Analysis of Genetic and Genomic Data
Papers that mentioned: 767
cran: adegraphics
An S4 Lattice-Based Package for the Representation of Multivariate Data
Papers that mentioned: 5
cran: adehabitatHR
Home Range Estimation
Papers that mentioned: 200
cran: adehabitatHS
Analysis of Habitat Selection by Animals
Papers that mentioned: 18
cran: adehabitatLT
Analysis of Animal Movements
Papers that mentioned: 72
cran: adehabitatMA
Tools to Deal with Raster Maps
Papers that mentioned: 2
cran: adephylo
Exploratory Analyses for the Phylogenetic Comparative Method
Papers that mentioned: 42
pypi: Adept
Simple binding for Adept
Papers that mentioned: 18
cran: AdequacyModel
Adequacy of Probabilistic Models and General Purpose Optimization
Papers that mentioned: 5
cran: adespatial
Multivariate Multiscale Spatial Analysis
Papers that mentioned: 36
pypi: adg
A powerful diagram generator and evaluator for many-body formalisms in physics and chemistry
Papers that mentioned: 1
cran: ADGofTest
Anderson-Darling GoF test
Papers that mentioned: 3
cran: AdhereR
Adherence to Medications
Papers that mentioned: 5
pypi: AdHoc
Standalone Package Generator
Papers that mentioned: 4
bioconductor: ADImpute
Adaptive Dropout Imputer (ADImpute)
Papers that mentioned: 1
cran: adiv
Analysis of Diversity
Papers that mentioned: 3
cran: adjclust
Adjacency-Constrained Clustering of a Block-Diagonal Similarity Matrix
Papers that mentioned: 2
pypi: adk
A ADK-dev Kit
Papers that mentioned: 1
cran: adklakedata
Adirondack Long-Term Lake Data
Papers that mentioned: 1
pypi: ADLES
Automated Deployment of Lab Environments System (ADLES)
Papers that mentioned: 1
cran: adlift
An Adaptive Lifting Scheme Algorithm
Papers that mentioned: 1
pypi: adm
Active Data Mapping, Pre-Alpha Release
Papers that mentioned: 1
pypi: admin
Develop soon
Papers that mentioned: 3
pypi: Admire
An intuitive reCAPTCHA interface.
Papers that mentioned: 8
cran: AdMit
Adaptive Mixture of Student-t Distributions
Papers that mentioned: 1
pypi: admix
An admixture analysis tool that supports raw data from 23andme, AncestryDNA, etc.
Papers that mentioned: 2
cran: admix
Package Admix for Admixture (aka Contamination) Models
Papers that mentioned: 2
cran: admixr
An Interface for Running 'ADMIXTOOLS' Analyses
Papers that mentioned: 5
cran: ADMM
Algorithms using Alternating Direction Method of Multipliers
Papers that mentioned: 20
cran: ADMMnet
Regularized Model with Selecting the Number of Non-Zeros
Papers that mentioned: 1
cran: adnuts
No-U-Turn MCMC Sampling for 'ADMB' Models
Papers that mentioned: 1
cran: ADP
Adoption Probability, Triers and Users Rate of a New Product
Papers that mentioned: 39
cran: ADPclust
Fast Clustering Using Adaptive Density Peak Detection
Papers that mentioned: 1
pypi: adr
This Python script is designed to help software development teams document their architecture decisions using Architecture Decision Records (ADRs).
Papers that mentioned: 1
cran: ads
Spatial Point Patterns Analysis
Papers that mentioned: 3
pypi: ads
A Python module for NASA's ADS that doesn't suck.
Papers that mentioned: 3
pypi: ADTM
Adaptive Data Tabulation Markup
Papers that mentioned: 1
pypi: Aduro
Progress tracker for Amazon Kindle
Papers that mentioned: 6
pypi: advanced
advanced
Papers that mentioned: 7
pypi: advbox
Python toolbox to create adversarial examples that fool neural networks
Papers that mentioned: 1
pypi: Advento
Fisica para Jogoso FGA
Papers that mentioned: 1
cran: ADVICE
Automatic Direct Variable Selection via Interrupted Coefficient Estimation
Papers that mentioned: 8
pypi: adw
appdirs wrapper library
Papers that mentioned: 1
pypi: ADwin
ADwin API wrapper
Papers that mentioned: 2
pypi: ae
Python accoustic emission tools
Papers that mentioned: 1