pypi: PyNN | Projects | Ecosyste.ms: Papers

10.3389/fninf.2018.00068

Code Generation in Computational Neuroscience: A Review of Tools and Techniques
Cited by: 27
Author(s): Inga Blundell, Romain Brette, Thomas A. Cleland, Thomas G. Close, Daniel Coca, Andrew P. Davison, Sandra Diaz-Pier, Carlos Fernandez Musoles, Padraig Gleeson, Dan F. M. Goodman, Michael L. Hines, Michael Hopkins, Pramod Kumbhar, David Lester, Bóris Marin, Abigail Morrison, Eric Müller, Thomas Nowotny, Alexander Peyser, Dimitri Plotnikov, Paul Richmond, Andrew Rowley, Bernhard Rumpe, Marcel Stimberg, Alan B. Stokes, Adam Tomkins, Guido Trensch, Michael Woodman, Jochen Martin Eppler
Software Mentions: 16
Published: almost 6 years ago

10.1186/s12868-019-0538-0

28th Annual Computational Neuroscience Meeting: CNS*2019
Cited by: 3
Author(s):
Software Mentions: 13
Published: almost 5 years ago

10.1186/s12868-017-0372-1

26th Annual Computational Neuroscience Meeting (CNS*2017): Part 3
Cited by: 5
Author(s): Adam J. H. Newton, Alexandra H Seidenstein, Robert A. McDougal, Alberto Pérez-Cervera, Gemma Huguet, Tere M. Seara, Caroline Haimerl, David Angulo-García, Alessandro Torcini, Rosa Cossart, Arnaud Malvache, K. Skiker, Mounir Maouene, Gianmarco Ragognetti, Letizia Lorusso, Andrea Viggiano, Angelo Marcelli, Rosa Senatore, Antonio Parziale, Sebastiano Stramaglia, M. Pellicoro, Lucia Angelini, Enrico Amico, Hannelore Aerts, Jesús M. Cortés, Steven Laureys, Daniele Marinazzo, Iege Bassez, Luca Faes, Hannes Almgren, Adeel Razi, Frederik Van de Steen, Ruth M. Krebs, Hannelore Aerts, Lida Kanari, Paweł Dłotko, Martina Scolamiero, Ran Levi, Julian C. Shillcock, Christiaan Pj de Kock, Katharina Heß, Henry Markram, Cheng Ly, Gary Marsat, Tom Gillespie, Malin Sandström, Mathew Abrams, Jeffrey S. Grethe, Maryann E. Martone, Robin De Gernier, Sergio Solinas, Christian Rössert, Marc Haelterman, Serge Massar, Valentina Pasquale, Vito Paolo Pastore, Sergio Martinoia, Paolo Massobrio, Cristiano Capone, Núria Tort-Colet, María V. Sánchez-Vives, Maurizio Mattia, Ali Almasi, Shaun L. Cloherty, David B. Grayden, Yan T. Wong, M. Ibbotson, Hamish Meffin, Luke Y. Prince, Krasimira Tsaneva-Atanasova, Jack R. Mellor, Annalisa Mazzoni, Manuela Rosa, J. Carpaneto, Luigi Romito, Alberto Priori, Silvestro Micera, Rosanna Migliore, Carmen Alina Lupaşcu, Francesco Franchina, Luca Bologna, Armando Romani, Sára Sáray, Werner Van Geit, Szabolcs Káli, Alex Thomson, Audrey Mercer, Sigrun Lange, Joanne Falck, Eilif Müller, Felix Schürmann, Dmitry Todorov, Robert Capps, William Barnett, Yaroslav I. Molkov, Federico Devalle, Diego Pazó, Ernest Montbrió, Gabriela Mochol, Habiba Azab, Benjamin Y. Hayden, Rubén Moreno‐Bote, Pragathi Priyadharsini Balasubramani, Srinivasa Chakravarthy, Vignayanandam Ravindernath Muddapu, Medorian D. Gheorghiu, Bartul Mimica, Jonathan Withlock, Raul C. Mureșan, Jennifer L. Zick, Kelsey Schultz, Rachael K. Blackman, Matthew V. Chafee, Theoden I. Netoff, Nicholas Roberts, Vivek Nagaraj, Andrew Lamperski, Logan L. Grado, Matthew D. Johnson, David Darrow, Davide Lonardoni, Hayder Amin, Stefano Di Marco, Alessandro Maccione, Luca Berdondini, Thierry Nieus, Marcel Stimberg, Dan F. M. Goodman, Thomas Nowotny, Veronika Koren, Valentin Dragoi, Klaus Obermayer, Samy Castro, Mariano Fernández, Wael El-Deredy, Ke Xu, Jean P. Maidana, Patricio Orio, Wei‐Liang Chen, Iain Hepburn, Francesco Casalegno, Adrien Devresse, A. G. Ovcharenko, Fernando Pereira, Fabien Delalondre, Erik De Schutter, Peter Bratby, Andrew R. Gallimore, Guido Klingbeil, Criseida Zamora, Yunliang Zang, Patrick Crotty, Eric Palmerduca, Alberto Antonietti, Claudia Casellato, Csaba Erö, Egidio D’Angelo, Marc‐Oliver Gewaltig, Alessandra Pedrocchi, Ilja Bytschok, Dominik Dold, Johannes Schemmel, K. Meier, Mihai A. Petrovici, Hui-An Shen, Simone Carlo Surace, Jean-Pascal Pfister, Baptiste Lefebvre, Olivier Marre, Pierre Yger, Athanasia Papoutsi, Jiyoung Park, Ryan T. Ash, Stelios M. Smirnakis, Panayiota Poirazi, Richard A. Felix, Alexander G. Dimitrov, Christine V. Portfors, Silvia Daun, Tibor Tóth, Joanna Jędrzejewska‐Szmek, Nadine Kabbani, Kim T. Blackwel, Bahar Moezzi, Natalie Schaworonkow, Lukas Plogmacher, Mitchell R. Goldsworthy, Brenton Hordacre, Mark D. McDonnell, Nicolangelo Iannella, Michael C. Ridding, Jochen Triesch, Reinoud Maex, Karen Safaryan, Volker Steuber, Rongxiang Tang, Yi‐Yuan Tang, Darya V. Verveyko, Alexey Brazhe, Andrey Yu. Verisokin, Dmitry E. Postnov, Cengiz Günay, Gabriella Panuccio, Michèle Giugliano, Astrid A. Prinz, Pablo Varona, M. I. Rabinovich, Jack E. Denham, Thomas Ranner, Netta Cohen, Maria Reva, Nelson Rebola, Tekla Kirizs, Zoltán Nusser, David A. DiGregorio, Eirini Mavritsaki, Panos Rentzelas, Nikul H. Ukani, Adam Tomkins, Chung-Heng Yeh, Wesley Bruning, Allison L. Fenichel, Yiyin Zhou, Yu-Chi Huang, Dorian Florescu, Carlos L. Ortiz, Paul Richmond, Chung-Chuan Lo, Daniel Coca, Ann‐Shyn Chiang, Aurel A. Lazar, Jennifer Creaser, Congping Lin, Peter Ashwin, Jon T. Brown, Thomas Ridler, Daniel Levenstein, Brendon O. Watson, György Buzsáki, John Rinzel, Rodica Curtu, Anh Trung Nguyen, Sahand Assadzadeh, P. A. Robinson, Paula Sanz‐Leon, Caroline Garcia Forlim, Lírio Onofre Baptista de Almeida, Reynaldo D. Pinto, Francisco B. Rodríguez, Ángel Lareo, Aarón Montero, Thiago Mosqueiro, Ramón Huerta, Vinicio Changoluisa, Vinícius Lima Cordeiro, Cesar Ceballos, Nilton L. Kamiji, Antonio Roque, William W. Lytton, Andrew T. Knox, Joshua J. C. Rosenthal, Svitlana Popovych, Liqing Liu, Bin A. Wang, Christian Grefkes, Gereon R. Fink, Nils Rosjat, Abraham Perez-Trujillo, Andrés Espinal, Marco Aurelio Sotelo-Figueroa, Iván Cruz-Aceves, Horacio Rostro-González, Martin Zapotocky, Martina Hoskovcová, J Kopecká, Olga Ulmanová, Evžen Růžička, Matthias Gärtner, Sevil Duvarci, Jochen Roeper, Gerd‐Helge Schneider, Štefan Albert, Katharina Schmack, Michiel W. H. Remme, Susanne Schreiber, Michele Migliore, Stefano Maximiliano Antonel, Jean-Denis Courcol, Sami Utku Çelikok, Eva M. Navarro-López, Neslihan Serap Şengör, Rahmi Elibol, Mustafa Y. Özdemir, Tianyi Li, Angelo Arleo, Denis Sheynikhovich, Akihiro Nakamura, Masanori Shimono, Youngjo Song, Sol Park, Ilhwan Choi, Jaeseung Jeong, Hee‐Sup Shin, Sadra Sadeh, Padraig Gleeson, R. Angus Silver, Alexandra P. Chatzikalymniou, Frances K. Skinner, Francisco B. Rodríguez, Roberto C. Sotero, Loreen Hertäg, Owen Mackwood, Henning Sprekeler, Steffen Puhlmann, Simon Weber, David Higgins, Laura Naumann, Ramakrisnan Iyer, Ştefan Mihalaş, Valentina Ticcinelli, Tomislav Stankovski, Peter V. E. McClintock, Aneta Stefanovska, Predrag Janjić, Dimitar Solev, Gerald Seifert, Ljupčo Kocarev, Christian Steinhäuser, Mehrdad Salmasi, Stefan Glasauer, Martin B. Stemmler, Danke Zhang, Chi Zhang, Armen Stepanyants, Julia Goncharenko, Lieke Kros, Neil Davey, Chris I. De Zeeuw, Freek E. Hoebeek, Ankur Sinha, Roderick Adams, Michael Schmuker, Maria Psarrou, Maria J. Schilstra, Benjamin Torben‐Nielsen, Christoph Metzner, Achim Schweikard, Tuomo Mäki‐Marttunen, Bartosz Zurowski, Daniele Marinazzo, Luca Faes, Sebastiano Stramaglia, H Jordan, Simon M. Stringer, Elżbieta Gajewska-Dendek, Piotr Suffczyński, Nicoladie D. Tam, George Zouridakis, Luca Pollonini, Mojtaba Madadi Asl, Alireza Valizadeh, Peter A. Tass, Andreas Nold, Wei Fan, Sara Konrad, Heiko Endle, Johannes Vogt, Tatjana Tchumatchenko, Juliane Herpich, Christian Tetzlaff, Jannik Luboeinski, Timo Nachstedt, Manuel Ciba, Andreas Bahmer, Christiane Thielemann, Eric S. Kuebler, Joseph S. Tauskela, Jean-Philippe Thivierge, Rembrandt Bakker, María García‐Amado, Marian Evangelio, Francisco Clascá, Paul Tiesinga, Christopher L. Buckley, Taro Toyoizumi, Alexis Dubreuil, Rémi Monasson, Alessandro Treves, Davide Spalla, Sophie Rosay, Florence I. Kleberg, Willy Wong, Bruno de Oliveira Floriano, Toshihiko Matsuo, Tetsuya Uchida, D. Dibenedetto, Kâmil Uludağ, Abdorreza Goodarzinick, Maximilian Schmidt, Claus C. Hilgetag, Markus Diesmann, Sacha J. van Albada, Michael Fauth, Mark C. W. van Rossum, Manuel Reyes-Sánchez, Rodrigo Amaducci, Carlos Múñiz, Irene Elices, David Arroyo, Rafael Levi, Ben Cohen, Carson C. Chow, Shashaank Vattikuti, Elena Bertolotti, Raffaella Burioni, Matteo di Volo, A. Vezzani, Bayar Menzat, Tim P. Vogels, Nobuhiko Wagatsuma, Susmita Saha, Reena Kapoor, Robert R. Kerr, John Wagner, Luis C. G. del Molino, Guangyu Robert Yang, Jorge F. Mejías, Xiaojing Wang, Hanbing Song, Joseph W. Goodliffe, Jennifer I. Luebke, Christina M. Weaver, John Thomas, Nishant Sinha, Nikhita Shaju, Tomasz Maszczyk, Jing Jin, Sydney S. Cash, Justin Dauwels, M. Brandon Westover, Maryam Karimian, Michelle Moerel, Peter De Weerd, Thomas Burwick, Ronald L. Westra, Romesh Abeysuriya, Jonathan Hadida, Stamatios N. Sotiropoulos, Saâd Jbabdi, Mark W. Woolrich, Chama Bensmail, Borys Wróbel, Xiaolong Zhou, Zilong Ji, Xiao Liu, Xin Yan, Si Wu, Wang Xiao, Mingsha Zhang, Netanel Ofer, Orit Shefi, Gur Yaari, Ted Carnevale, Amit Majumdar, Subhashini Sivagnanam, Kenneth Yoshimoto, Elena Y. Smirnova, Dmitry V. Amakhin, Sergey L. Malkin, Aleksey V. Zaitsev, Anton V. Chizhov, Margarita Zaleshina, Alexander Zaleshin, Victor J. Barranca, George Zhu, Quinton M. Skilling, Daniel Maruyama, Nicolette Ognjanovski, Sara J. Aton, Michal Zochowski, Jiaxing Wu, Sara J. Aton, Scott Rich, Victoria Booth, Maral Budak, Salvador Dura‐Bernal, Samuel A. Neymotin, Benjamin A. Suter, Gordon M. Shepherd, Melvin Felton, Alfred B. Yu, David L. Boothe, Kelvin S. Oie, Piotr J. Franaszczuk, Sergey A. Shuvaev, Batuhan Başerdem, Anthony M. Zador, Alexei A. Koulakov, Víctor J. López‐Madrona, Ernesto Pereda, Claudio R. Mirasso, Santiago Canals, Stefano Masoli, Udaya Bhaskar Rongala, Anton Spanne, Henrik Jörntell, Calogero Maria Oddo, A. Vartanov, Anastasia Neklyudova, S. Kozlovskiy, A. Kiselnikov, J. Marakshina, Maria Teleńczuk, Bartosz Teleńczuk, Alain Destexhe, Paula T. Kuokkanen, Anna Kraemer, Thomas McColgan, Catherine Carr, Richard Kempter
Software Mentions: 12
Published: about 7 years ago

10.1371/journal.pone.0029018

Python as a Federation Tool for GENESIS 3.0
Cited by: 26
Author(s): Hugo Cornelis, Antony Rodríguez, Allan D Coop, James M. Bower
Software Mentions: 10
Published: over 12 years ago

10.7554/eLife.47314

Brian 2, an intuitive and efficient neural simulator
Cited by: 372
Author(s): Marcel Stimberg, Romain Brette, Dan F. M. Goodman
Software Mentions: 10
Published: about 5 years ago

10.7554/eLife.44494

NetPyNE, a tool for data-driven multiscale modeling of brain circuits
Cited by: 101
Author(s): Salvador Dura‐Bernal, Benjamin A. Suter, Padraig Gleeson, Matteo Carandini, Adrián Quintana, Facundo Rodriguez, David J. Kedziora, George L. Chadderdon, Cliff C. Kerr, Samuel A. Neymotin, Robert A. McDougal, Michael L. Hines, Gordon M. Shepherd, William W. Lytton
Software Mentions: 10
Published: over 5 years ago

10.3389/fninf.2015.00019

ANNarchy: a code generation approach to neural simulations on parallel hardware
Cited by: 65
Author(s): Julien Vitay, Helge Ülo Dinkelbach, Fred H. Hamker
Software Mentions: 9
Published: about 9 years ago

10.3389/fninf.2016.00008

PyRhO: A Multiscale Optogenetics Simulation Platform
Cited by: 20
Author(s): Benjamin D. Evans, Sarah Jarvis, Simon R. Schultz, Konstantin Nikolić
Software Mentions: 9
Published: over 8 years ago

10.3389/fninf.2017.00046

Software for Brain Network Simulations: A Comparative Study
Cited by: 42
Author(s): Ruben A. Tikidji-Hamburyan, Vikram K. Narayana, Zeki Bozkuş, Tarek El‐Ghazawi
Software Mentions: 9
Published: about 7 years ago

10.3389/fninf.2021.659005

PyGeNN: A Python Library for GPU-Enhanced Neural Networks
Cited by: 23
Author(s): James C. Knight, A. B. Комиссаров, Thomas Nowotny
Software Mentions: 8
Published: over 3 years ago

10.3389/fninf.2014.00063

A flexible, interactive software tool for fitting the parameters of neuronal models
Cited by: 25
Author(s): Péter Friedrich, M.C. Vella, Attila I. Gulyás, Tamás F. Freund, Szabolcs Káli
Software Mentions: 8
Published: about 10 years ago

10.3389/fninf.2015.00011

Python in neuroscience
Cited by: 51
Author(s): Eilif Müller, James A. Bednar, Markus Diesmann, Marc‐Oliver Gewaltig, Michael L. Hines, Andrew P. Davison
Software Mentions: 8
Published: over 9 years ago

10.1371/journal.pcbi.1007696

The SONATA data format for efficient description of large-scale network models
Cited by: 26
Author(s): Kael Dai, Juan Hernando, Yazan N. Billeh, Sergey L. Gratiy, Judit Planas, Andrew P. Davison, Salvador Dura‐Bernal, Padraig Gleeson, Adrien Devresse, Benjamin Dichter, Michael Gevaert, James G. King, Werner A. H. Van Geit, Arseny V. Povolotsky, Eilif Müller, Jean-Denis Courcol, Anton Arkhipov
Software Mentions: 8
Published: over 4 years ago

10.1186/s12868-017-0371-2

26th Annual Computational Neuroscience Meeting (CNS*2017): Part 2
Cited by: 7
Author(s): Leonid L. Rubchinsky, Sungwoo Ahn, Wouter Klijn, Ben Cumming, Stuart Yates, Vasileios Karakasis, Alexander Peyser, Marmaduke Woodman, Sandra Diaz-Pier, James Deraeve, Eliana Vassena, William H. Alexander, David Beeman, Paweł Kudela, Dana Boatman-Reich, William S. Anderson, Niceto R. Luque, Francisco Naveros, Richard R. Carrillo, Eduardo Ros, Angelo Arleo, Jacob Huth, Koki Ichinose, Jihoon Park, Yuji Kawai, Junko Suzuki, Hiroki Mori, Minoru Asada, Sorinel A. Oprisan, Austin I. Dave, Tahereh Babaie, Peter Robinson, Alejandro Tabas, Martin Andermann, André Rupp, Emili Balaguer‐Ballester, Henrik Lindén, Rasmus Kordt Christensen, Mari Nakamura, Tania Rinaldi Barkat, Zach Tosi, John M. Beggs, Davide Lonardoni, Fabio Boi, Stefano Di Marco, Alessandro Maccione, Luca Berdondini, Joanna Jędrzejewska‐Szmek, Daniel B. Dormán, Kim T. Blackwell, Christoph Bauermeister, Hanna Keren, Jochen Braun, João V. Dornas, Eirini Mavritsaki, Silvio Aldrovandi, Emma K. Bridger, Sukbin Lim, Nicolas Brunel, Anatoly Buchin, Clifford Charles Kerr, Anton V. Chizhov, Gilles Huberfeld, Richard Miles, Boris Gutkin, Martin Spencer, Hamish Meffin, David B. Grayden, Anthony N. Burkitt, Catherine E. Davey, Liangyu Tao, Vineet Tiruvadi, Rehman Ali, Helen S. Mayberg, Robert J. Butera, Cengiz Günay, Damon G. Lamb, Ronald L. Calabrese, Anca Doloc-Mihu, Víctor J. López‐Madrona, Fernanda S. Matias, Ernesto Pereda, Claudio R. Mirasso, Santiago Canals, Alice Geminiani, Alessandra Pedrocchi, Egidio D’Angelo, Claudia Casellato, Ankur Chauhan, Karthik Soman, V. Srinivasa Chakravarthy, Vignayanandam Ravindernath Muddapu, Chao-Chun Chuang, Nan-yow Chen, Mehdi Bayati, Jan Melchior, Laurenz Wiskott, Amir Azizi, Kamran Diba, Sen Cheng, Elena Y. Smirnova, E. G. Yakimova, Chi-Tin Shih, Dorian Florescu, Daniel Coca, Julie Courtiol, Viktor K. Jirsa, R. J. M. Covolan, Bartosz Teleńczuk, Richard Kempter, Gabriel Curio, Alain Destexhe, Jessica Parker, Alexander N. Klishko, Boris I. Prilutsky, Gennady Cymbalyuk, Felix Franke, Andreas Hierlemann, Rava Azeredo da Silveira, Stefano Casali, Stefano Masoli, Martina Francesca Rizza, Yinming Sun, Willy Wong, Faranak Farzan, Daniel M. Blumberger, Zafiris J. Daskalakis, Svitlana Popovych, Shivakumar Viswanathan, Nils Rosjat, Christian Grefkes, Silvia Daun, Damiano Gentiletti, Piotr Suffczyński, Vadym Gnatkovski, Marco de Curtis, Hyeonsu Lee, Se‐Bum Paik, Woochul Choi, Jaeson Jang, Youngjin Park, Jun Song, Min Song, Vicente Pallarés, Matthieu Gilson, Simone Kühn, Andrea Insabato, Gustavo Deco, Katharina Glomb, Adrián Ponce‐Alvarez, Petra Ritter, Adrià Tauste Campo, Alexander Thiele, F. Deeba, P. A. Robinson, Sacha J. van Albada, Andrew Rowley, Michael Hopkins, Maximilian Schmidt, Alan B. Stokes, David Lester, Steve Furber, Markus Diesmann, Alessandro Barri, Martin T. Wiechert, David A. DiGregorio, Alexander G. Dimitrov, Catalina Vich, Rune W. Berg, Antoni Guillamón, Susanne Ditlevsen, Romain D. Cazé, Benoît Girard, Stéphane Doncieux, Nicolas Doyon, Frank Boahen, Patrick Desrosiers, Edward Laurence, Louis J. Dubé, Eleonora Russo, Daniel Durstewitz, Dominik Schmidt, Tuomo Mäki‐Marttunen, Florian Krull, Francesco Bettella, Christoph Metzner, Anna Devor, Srdjan Djurovic, Anders M. Dale, Ole A. Andreassen, Gaute T. Einevoll, Solveig Næss, Torbjørn V. Ness, Geir Halnes, Eric Halgren, Klas H. Pettersen, Marte J. Sætra, Espen Hagen, Alina Schiffer, Axel Grzymisch, Malte Persike, Udo Ernst, Daniel Harnack, Nergis Tömen, Stefano Zucca, Valentina Pasquale, Giuseppe Pica, Manuel Molano-Mazón, Michela Chiappalone, Stefano Panzeri, Tommaso Fellin, Kelvin S. Oie, David L. Boothe, Joshua C. Crone, Alfred B. Yu, Melvin Felton, Isma Zulfiqar, Michelle Moerel, Peter De Weerd, Elia Formisano, Piotr J. Franaszczuk, Roland Diggelmann, Michele Fiscella, Domenico Guarino, Ján Antolík, Andrew Davison, Yves Frégnac, Benjamin Xavier Etienne, Flavio Fröhlich, Jérémie Lefebvre, Encarni Marcos, Maurizio Mattia, Aldo Genovesio, Leonid Fedorov, Tjeerd M. H. Dijkstra, Louisa Sting, Howard S. Hock, Martin A. Giese, Laure Buhry, Clément Langlet, Francesco Giovannini, Christophe Verbist, Stefano Salvadè, Michèle Giugliano, James A. Henderson, Hendrik Wernecke, Bulcsú Sándor, Claudius Gros, Nicole Voges, Paulina Dabrovska, Alexa Riehle, Thomas Brochier, Sonja Grün, Y. T. Gu, Pulin Gong, Grégory Dumont, Nikita A. Novikov, Parul Tewatia, Olivia Eriksson, Andrei Kramer, João Pedro Gonçalves dos Santos, Alexandra Jauhiainen, Jeanette Hellgren Kotaleski, Jovana J. Belić, Arvind Kumar, Masanori Shimono, Naomichi Hatano, Subutai Ahmad, Yuwei Cui, Jeff Hawkins, Johanna Senk, Karolína Korvasová, Tom Tetzlaff, Moritz Helias, Tobias Kühn, Michael Denker, PierGianLuca Porta Mana, David Dahmen, Jannis Schuecker, Sven Goedeke, Christian Keup, Katja Heuer, Rembrandt Bakker, Paul Tiesinga, Roberto Toro, Wei Qin, Alex E. Hadjinicolaou, M. Ibbotson, Tatiana Kameneva, William W. Lytton, Lealem Mulugeta, Andrew Drach, Jerry G. Myers, Marc Horner, Rajanikanth Vadigepalli, Tina Morrison, Marlei Walton, Martin J. Steele, C. Anthony Hunt, Nicoladie D. Tam, Rodrigo Amaducci, Carlos Múñiz, Manuel Reyes-Sánchez, Francisco B. Rodríguez, Pablo Varona, Joseph T. Cronin, Matthias Hennig, Elisabetta Iavarone, Jane Yi, Ying Shi, Bas-Jan Zandt, Werner Van Geit, Christian Rössert, Henry Markram, Sean Hill, Christian O’Reilly, Rodrigo Perin, Huanxiang Lu, Alexander Bryson, Michal Hadrava, Jaroslav Hlinka, Ryosuke Hosaka, Mark Olenik, Conor Houghton, Nicolangelo Iannella, Thomas Lavstsen, Rebecca Kotsakidis, Jaymar Soriano, Takatomi Kubo, Takao Inoue, Hirotaka Kida, Toshitaka Yamakawa, Michiyasu Suzuki, Kazushi Ikeda, Samira Abbasi, Amber E. Hudson, Detlef H. Heck, Dieter Jaeger, Joel Lee, Skirmantas Janušonis, Maria Luisa Saggio, Andreas Spiegler, William C. Stacey, Christophe Bernard, Davide Lillo, Spase Petkoski, Mark Drakesmith, Derek K. Jones, Ali Sadegh Zadeh, C. Kambhampati, Jan Karbowski, Zeynep Gokcen Kaya, Yair Lakretz, Alessandro Treves, Lily W. Li, Joseph T. Lizier, Cliff C. Kerr, Timothée Masquelier, Saeed Reza Kheradpisheh, Hojeong Kim, Chang Sub Kim, J. Marakshina, A. Vartanov, Anastasia Neklyudova, S. Kozlovskiy, A. Kiselnikov, Kanako Taniguchi, Katsunori Kitano, Oliver Schmitt, Felix Leßmann, Sebastian Schwanke, Peter Eipert, Meinhardt Jennifer, Julia Beier, Kanar Kadir, Adrian Karnitzki, Linda Sellner, Ann-Christin Klünker, Lena Kuch, Frauke Ruß, Jörg Jenssen, Andreas Wree, Paula Sanz‐Leon, S. A. Knock, Shih-Cheng Chien, Burkhard Maeß, Thomas R. Knösche, Charles C.H. Cohen, Marko Popović, Jan Klooster, Maarten H. P. Kole, Erik A. Roberts, Nancy Kopell, Daniel Kepple, Hamza Giaffar, Dima Rinberg, Alex Koulakov, Caroline Garcia Forlim, Leonie Klock, Johanna Bächle, Laura Stoll, Patrick Giemsa, Marie Fuchs, Nikola Schoofs, Christiane Montag, Jürgen Gallinat, Ray X. Lee, Greg Stephens, Bernd Kühn, Luiz Tauffer, Philippe Isope, Katsuma Inoue, Yoshiyuki Ohmura, Shogo Yonekura, Yasuo Kuniyoshi, Hyun Jae Jang, Jeehyun Kwag, Marc de Kamps, Yi Ming Lai, Filipa Santos, K. P. Lam, Péter András, Julia P. Imperatore, Jessica Helms, Tamás Tompa, Antonieta Lavín, Felicity H Inkpen, Michael C. Ashby, Nathan F. Lepora, Aaron R. Shifman, John E. Lewis, Zhong Zhang, Yeqian Feng, Christian Tetzlaff, Tomas Kulvičius, Yinyun Li, Rodrigo F. O. Pena, Davide Bernardi, Antonio Roque, Benjamin Lindner, Sebastian Vellmer, Aušra Saudargienė, Tiina Maninen, Riikka Havela, Marja-Leena Linne, Arthur S. Powanwe, André Longtin, Jesús Garrido, Joe W. Graham, Salvador Dura‐Bernal, Sergio Angulo, Samuel A. Neymotin, Srdjan D. Antic
Software Mentions: 7
Published: about 7 years ago

10.1186/s12868-018-0452-x

27th Annual Computational Neuroscience Meeting (CNS*2018): Part One
Cited by: 2
Author(s):
Software Mentions: 7
Published: almost 6 years ago

10.1186/s12868-016-0283-6

25th Annual Computational Neuroscience Meeting: CNS-2016
Cited by: 71
Author(s): Tatyana O. Sharpee, Alain Destexhe, Mitsuo Kawato, Vladislav Sekulić, Frances K. Skinner, Daniel K. Wójcik, Chaitanya Chintaluri, Dorottya Cserpán, Zoltán Somogyvári, Jae Kyoung Kim, Zachary P. Kilpatrick, Matthew R. Bennett, Krešimir Josić, Irene Elices, David Arroyo, Rafael Levi, Francisco B. Rodríguez, Pablo Varona, Eunjin Hwang, Bowon Kim, Hio-Been Han, Tae Il Kim, James T Mckenna, Ritchie E. Brown, Robert W. McCarley, Jee Hyun Choi, James Rankin, Pamela Osborn Popp, John Rinzel, Alejandro Tabas, André Rupp, Emili Balaguer‐Ballester, Matias I. Maturana, David B. Grayden, Shaun L. Cloherty, Tatiana Kameneva, M. Ibbotson, Hamish Meffin, Veronika Koren, Timm Lochmann, Valentin Dragoi, Klaus Obermayer, Maria Psarrou, Maria J. Schilstra, Neil Davey, Benjamin Torben‐Nielsen, Volker Steuber, Huiwen Ju, Junsheng Yu, Michael L. Hines, Liang Chen, Yuguo Yu, Jimin Kim, Will Leahy, Eli Shlizerman, Justas Birgiolas, Richard C. Gerkin, Atthaphon Viriyopase, Raoul-Martin Memmesheimer, Stan Gielen, Yuri Dabaghian, Justin DeVito, Luca Perotti, Anmo J. Kim, Lisa M. Fenk, Cheng Cheng, Gaby Maimon, Chang Zhao, Yves F. Widmer, Simon G. Sprecher, Walter Senn, Geir Halnes, Tuomo Mäki‐Marttunen, Daniel Keller, Klas H. Pettersen, Ole A. Andreassen, Gaute T. Einevoll, Yasunori Yamada, Moira L. Steyn-Ross, D. Alistair Steyn-Ross, Jorge F. Mejías, John D. Murray, Henry Kennedy, Xiaojing Wang, Alexandra Kruscha, Jan Grewe, Jan Benda, Benjamin Lindner, Laurent Badel, Kazumi Ohta, Yoshiko Tsuchimoto, Hokto Kazama, B. Kahng, Nicoladie D. Tam, Luca Pollonini, George Zouridakis, Jaehyun Soh, DaeEun Kim, Minsu Yoo, Stéphanie Palmer, Viviana Culmone, Ingo Bojak, Andrea Ferrario, Robert Merrison-Hort, Roman Borisyuk, Chang Sub Kim, T. Tezuka, Pangyu Joo, Young-Ah Rho, Shawn D. Burton, G. Bard Ermentrout, Jaeseung Jeong, Nathaniel N. Urban, Petr Maršálek, Hoon-Hee Kim, Seok-hyun Moon, Dowon Lee, Sung-beom Lee, Ji-yong Lee, Yaroslav I. Molkov, Khaldoun C. Hamade, Wondimu Teka, William Barnett, Taegyo Kim, Sergey N. Markin, Ilya A. Rybak, Csaba Forró, Harald Dermutz, László Demkó, János Vörös, Andrey Babichev, Haiping Huang, Sergio Verduzco-Flores, Filipa Santos, Péter András, Christoph Metzner, Achim Schweikard, Bartosz Zurowski, James P. Roach, Leonard M. Sander, Michał Żochowski, Quinton M. Skilling, Nicolette Ognjanovski, Sara J. Aton, Shengjun Wang, Guang Ouyang, Jing Guang, Mingsha Zhang, K. Y. Michael Wong, Changsong Zhou, P. A. Robinson, Paula Sanz‐Leon, P.M. Drysdale, Felix Fung, Romesh Abeysuriya, Chris Rennie, Xuelong Zhao, Yoonsuck Choe, Huei-Fang Yang, Yuanyuan Mi, Xinhua Lin, Si Wu, Joscha Liedtke, Manuel Schottdorf, Fred Wolf, Yuichi Yamamura, Jeffery R. Wickens, Timothy Rumbell, Julia Ramsey, Amy Reyes, Danel Draguljić, Patrick R. Hof, Jennifer I. Luebke, Christina M. Weaver, Hu He, Yang Xu, Hailin Ma, Zhiheng Xu, Yuzhe Wang, Kwangyeol Baek, Laurel Morris, Prantik Kundu, Valerie Voon, Everton J. Agnes, Tim P. Vogels, William F Podlaski, Martin A. Giese, Pradeep Kuravi, Rufin Vogels, Alexander Seeholzer, Rajnish Ranjan, Tim P. Vogels, Joaquín J. Torres, Fabiano Baroni, Roberto Latorre, Bart Gips, Eric Lowet, Mark Roberts, Peter De Weerd, Ole Jensen, Jan van der Eerden, Abdorreza Goodarzinick, M. D. Niry, Alireza Valizadeh, Aref Pariz, Shervin S. Parsi, Julia M. Warburton, Lucia Marucci, Francesco Tamagnini, Jon Brown, Krasimira Tsaneva-Atanasova, Florence I. Kleberg, Jochen Triesch, Bahar Moezzi, Nicolangelo Iannella, Natalie Schaworonkow, Lukas Plogmacher, Mitchell R. Goldsworthy, Brenton Hordacre, Mark D. McDonnell, Michael C. Ridding, Martin Zapotocky, Daniel Šmít, Isabelle Dusart, Alain Trembleau, Sakyasingha Dasgupta, Isao Nishikawa, Kazuyuki Aihara, Taro Toyoizumi, Daniel Robb, Nick Mellen, Natalia Toporikova, Rongxiang Tang, Yi‐Yuan Tang, Guangsheng Liang, Seth Kiser, James H. Howard, Julia Goncharenko, Sergej O. Voronenko, Tosif Ahamed, Greg Stephens, Pierre Yger, Baptiste Lefebvre, Giulia Lia Beatrice Spampinato, Elric Esposito, Marcel Stimberg et Olivier Marre, Hansol Choi, Min‐Ho Song, SueYeon Chung, Dan D. Lee, Haim Sompolinsky, Ryan S. Phillips, Jeffrey C. Smith, Alexandra P. Chatzikalymniou, Katie Ferguson, N. Alex Cayco Gajic, Claudia Clopath, R. Angus Silver, Padraig Gleeson, Bóris Marin, Sadra Sadeh, Adrián Quintana, Matteo Carandini, Salvador Dura‐Bernal, William W. Lytton, Andrew Davison, Luozheng Li, Wenhao Zhang, Dahui Wang, Youngjo Song, Sol Park, Ilhwan Choi, Hee‐Sup Shin, Hannah Choi, Anitha Pasupathy, Eric Shea‐Brown, Dongsung Huh, Terrence J. Sejnowski, Simon Vogt, Arvind Kumar, Robert J. Schmidt, Stephen Van Wert, Steven J. Schiff, Richard Veale, Matthias Scheutz, Sang Wan Lee, Júlia V. Gallinaro, Stefan Rotter, Leonid L. Rubchinsky, Chung Ching Cheung, Shivakeshavan Ratnadurai‐Giridharan, Safura Rashid Shomali, Majid Nili Ahmadabadi, Hideaki Shimazaki, Seyyed Nader Rasuli, Xiaochen Zhao, Malte J. Rasch, Jens Wilting, Viola Priesemann, Anna Levina, Lucas Rudelt, Joseph T. Lizier, Richard E. Spinney, Mikail Rubinov, Michael Wibral, Ji Hyun Bak, Jonathan W. Pillow, Yuan Zaho, Il Park, J K Kang, Hae Jeong Park, Jaeson Jang, Se‐Bum Paik, Woochul Choi, Changju Lee, Min Song, Hyeonsu Lee, Youngjin Park, Ergin Yilmaz, Veli Baysal, Mahmut Özer, Daniel Saska, Thomas Nowotny, Ho Ka Chan, Alan Diamond, Christoph S. Herrmann, Micah M. Murray, Silvio Ionta, Axel Hutt, Jérémie Lefebvre, Philipp Weidel, Renato Duarte, Abigail Morrison, Jung H. Lee, Ramakrishnan Iyer, Ştefan Mihalaş, Christof Koch, Mihai A. Petrovici, Luziwei Leng, Oliver Breitwieser, David Stöckel, Ilja Bytschok, Roman Martel, Johannes Bill, Johannes Schemmel, K. Meier, Timothy B Esler, Anthony N. Burkitt, Robert R. Kerr, Bahman Tahayori, Max Nolte, Michael Reimann, Eilif Müller, Henry Markram, Antonio Parziale, Rosa Senatore, Angelo Marcelli, K. Skiker, Mounir Maouene, Samuel A. Neymotin, Alexandra H Seidenstein, Péter L. Lakatos, Terence D. Sanger, Rosemary J. Menzies, Campbell McLauchlan, Sacha J. van Albada, David J. Kedziora, Samuel A. Neymotin, Cliff C. Kerr, Benjamin A. Suter, Gordon M. Shepherd, Juhyoung Ryu, Sang-Hun Lee, Joonwon Lee, Hyang Jung Lee, Daeseob Lim, Jisung Wang, Heonsoo Lee, Nam Jung, Le Anh Quang, Seung Eun Maeng, Tae Ho Lee, Jae Woo Lee, Chang-Hyun Park, Sora Ahn, Jangsup Moon, Yun Seo Choi, Juhee Kim, Sang Beom Jun, Seungjun Lee, Hyang Woon Lee, Sumin Jo, Eunji Jun, Suin Yu, Felix Goetze, Pik‐Yin Lai, Seonghyun Kim, Jeehyun Kwag, Hyun Jae Jang, Marko Filipović, Ramón Reig, Ad Aertsen, Gilad Silberberg, Claudia Bachmann, Simone Buttler, Heidi I.L. Jacobs, Kim Dillen, Gereon R. Fink, Juraj Kukolja, Daniel Kepple, Hamza Giaffar, Dima Rinberg, Steven J. Shea, Alex Koulakov, Jyotika Bahuguna, Tom Tetzlaff, Jeanette Hellgren Kotaleski, Tim Kunze, Andre D. H. Peterson, Thomas R. Knösche, Minjung Kim, Hojeong Kim, Ji Sung Park, Ji Won Yeon, Sung-Phil Kim, Jae-Hwan Kang, Chungho Lee, Andreas Spiegler, Spase Petkoski, Matias Palva, Viktor K. Jirsa, Maria Luisa Saggio, Silvan F. Siep, William C. Stacey, Christophe Bernar, Oh-Hyeon Choung, Yong Jeong, Lee Yong-IL, Su Hyun Kim, Mir Jeong, Jeungmin Lee, Jaehyung Kwon, Jerald D. Kralik, Jaehwan Jahng, Dong‐Uk Hwang, Sang-Min Park, Seong-Kyun Kim, Hyoungkyu Kim, Pyeong Soo Kim, Sangsup Yoon, Sewoong Lim, Choongseok Park, T. Miller, Katie N Clements, Sungwoo Ahn, Eoon Hye Ji, Fadi A. Issa, Jeonghun Baek, Shigeyuki Oba, Junichiro Yoshimoto, Kenji Doya, Shin Ishii, Thiago Mosqueiro, Martin F. Strube‐Bloss, Brian E. Smith, Ramón Huerta, Michal Hadrava, Jaroslav Hlinka, Hannah Bos, Moritz Helias, Charles M. Welzig, Zachary J. Harper, Won Sup Kim, In-Seob Shin, Hyeon‐Man Baek, Seung Kee Han, René Richter, Julien Vitay, Frederick Beuth, Fred H. Hamker, Kelly Toppin, Yixin Guo, Bruce Graham, Penelope J. Kale, Leonardo L Gollo, Merav Stern, L. F. Abbott, Leonid Fedorov, Martin A. Giese, Mohammad Hovaidi Ardestani, Mohammad Javad Faraji, Kerstin Preuschoff, Wulfram Gerstner, M.J. van Gendt, Jeroen J. Briaire, Randy K. Kalkman, J.H.M. Frijns, Won Hee Lee, Sophia Frangou, Ben D. Fulcher, Patricia H. P. Tran, Alex Fornito, S. Gliske, Eugene Lim, Katherine A. Holman, Christian G. Fink, Jinseop S. Kim, Shang Mu, Kevin L. Briggman, H. Sebastian Seung, Detlef Wegener, Lisa Bohnenkamp, Udo Ernst, Anna Devor, Anders M. Dale, Glenn Terje Lines, Andy Edwards, Aslak Tveito, Espen Hagen, Johanna Senk, Markus Diesmann, Maximilian Schmidt, Rembrandt Bakker, Kelly Shen, Gleb Bezgin, Claus-Christian Hilgetag, Sacha J. van Albada, Haoqi Sun, Olga Sourina, Guang-Bin Huang, Felix Klanner, Cornelia Denk, Katharina Glomb, Adrián Ponce‐Alvarez, Matthieu Gilson, Petra Ritter, Gustavo Deco, Maria A. G. Witek, Eric Clarke, Mads Hansen, Mikkel Wallentin, Morten L. Kringelbach, Peter Vuust, Guido Klingbeil, Erik De Schutter, Wei‐Liang Chen, Yunliang Zang, Sungho Hong, Akira Takashima, Criseida Zamora, Andrew R. Gallimore, Dennis Goldschmidt, Poramate Manoonpong, Philippa J. Karoly, Dean R. Freestone, Daniel Soundry, Levin Kuhlmann, Liam Paninski, Mark Cook, Jaejin Lee, Yonatan I. Fishman, Yale E. Cohen, James A. Roberts, Luca Cocchi, Yann Sweeney, Mi Kyung Lee, Woo-Sung Jung, Youngsoo Kim, Younginha Jung, Yoon‐Kyu Song, Frédéric Chavane, Karthik Soman, Vignesh Muralidharan, V. Srinivasa Chakravarthy, Sabyasachi Shivkumar, Alekhya Mandali, Balasubramani Pragathi Priyadharsini, Hima Mehta, Catherine E. Davey, Braden A. W. Brinkman, Tyler Kekona, Fred Rieke, Michael A. Buice, Maurizio De Pittà, Hugues Berry, Nicolas Brunel, Michael Breakspear, Gary Marsat, Jordan Drew, Phillip D. Chapman, Kevin C. Daly, Samual P. Bradle, Sat Byul Seo, Jianzhong Su, Ege T. Kavalali, Justin Blackwell, LieJune Shiau, Laure Buhry, Kanishka Basnayake, Sue-Hyun Lee, Brandon A. Levy, Chris I. Baker, Timothee Leleu, Ryan T. Philips, Karishma Chhabria
Software Mentions: 7
Published: about 8 years ago

10.3389/fnins.2021.667011

Benchmarking Highly Parallel Hardware for Spiking Neural Networks in Robotics
Cited by: 5
Author(s): Lea Steffen, Robin Koch, Stefan Ulbrich, Sven Nitzsche, Arne Roennau, Rüdiger Dillmann
Software Mentions: 6
Published: about 3 years ago

10.1371/journal.pcbi.1002521

The Layer-Oriented Approach to Declarative Languages for Biological Modeling
Cited by: 10
Author(s): Ivan Raikov, Erik De Schutter
Software Mentions: 6
Published: over 12 years ago

10.1371/journal.pcbi.1008386

Brain Modeling ToolKit: An open source software suite for multiscale modeling of brain circuits
Cited by: 28
Author(s): Kael Dai, Sergey L. Gratiy, Yazan N. Billeh, Richard Xu, Bin Cai, Nicholas Cain, Atle E Rimehaug, A. Stasik, Gaute T. Einevoll, Ştefan Mihalaş, Christof Koch, Anton Arkhipov
Software Mentions: 6
Published: almost 4 years ago

10.3389/fninf.2016.00038

pypet: A Python Toolkit for Data Management of Parameter Explorations
Cited by: 14
Author(s): Robert K. Meyer, Klaus Obermayer
Software Mentions: 5
Published: about 8 years ago

10.3389/fnins.2018.00941

GPUs Outperform Current HPC and Neuromorphic Solutions in Terms of Speed and Energy When Simulating a Highly-Connected Cortical Model
Cited by: 55
Author(s): James C. Knight, Thomas Nowotny
Software Mentions: 5
Published: almost 6 years ago

10.3389/fninf.2014.00038

libNeuroML and PyLEMS: using Python to combine procedural and declarative modeling approaches in computational neuroscience
Cited by: 24
Author(s): M.C. Vella, Robert C. Cannon, Sharon Crook, Andrew P. Davison, Gautham Ganapathy, Hugh P. C. Robinson, R. Angus Silver, Padraig Gleeson
Software Mentions: 5
Published: over 10 years ago

10.3389/fninf.2014.00037

Python-based geometry preparation and simulation visualization toolkits for STEPS
Cited by: 6
Author(s): Weiliang Chen, Erik De Schutter
Software Mentions: 5
Published: over 10 years ago

10.3389/fninf.2014.00076

Limits to high-speed simulations of spiking neural networks using general-purpose computers
Cited by: 50
Author(s): Friedemann Zenke, Wulfram Gerstner
Software Mentions: 5
Published: about 10 years ago

10.3389/fninf.2013.00047

morphforge: a toolbox for simulating small networks of biologically detailed neurons in Python
Cited by: 5
Author(s): Michael Hull, David Willshaw
Software Mentions: 5
Published: over 10 years ago

10.3389/fninf.2016.00017

BluePyOpt: Leveraging Open Source Software and Cloud Infrastructure to Optimise Model Parameters in Neuroscience
Cited by: 104
Author(s): Werner Van Geit, Michael Gevaert, Giuseppe Chindemi, Christian Rössert, Jean-Denis Courcol, Eilif Müller, Felix Schürmann, Idan Segev, Henry Markram
Software Mentions: 5
Published: over 8 years ago

10.3389/fninf.2014.00079

LEMS: a language for expressing complex biological models in concise and hierarchical form and its use in underpinning NeuroML 2
Cited by: 86
Author(s): Robert C. Cannon, Padraig Gleeson, Sharon Crook, Gautham Ganapathy, Bóris Marin, Eugenio Piasini, R. Angus Silver
Software Mentions: 5
Published: almost 10 years ago

10.7554/eLife.62362

Accelerating with FlyBrainLab the discovery of the functional logic of the Drosophila brain in the connectomic and synaptomic era
Cited by: 17
Author(s): Aurel A. Lazar, Tingkai Liu, Mehmet Kerem Türkcan, Yiyin Zhou
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pone.0201630

BioNet: A Python interface to NEURON for modeling large-scale networks
Cited by: 49
Author(s): Sergey L. Gratiy, Yazan N. Billeh, Kael Dai, Catalin Mitelut, David Feng, Nathan W. Gouwens, Nicholas Cain, Christof Koch, Costas A. Anastassiou, Anton Arkhipov
Software Mentions: 5
Published: about 6 years ago

10.3389/fnbot.2020.568359

Nengo and Low-Power AI Hardware for Robust, Embedded Neurorobotics
Cited by: 46
Author(s): Travis DeWolf, Pawel Jaworski, Chris Eliasmith
Software Mentions: 5
Published: almost 4 years ago

10.1371/journal.pone.0146581

Neurokernel: An Open Source Platform for Emulating the Fruit Fly Brain
Cited by: 21
Author(s): Lev E. Givon, Aurel A. Lazar
Software Mentions: 5
Published: over 8 years ago

10.1371/journal.pcbi.1000815

NeuroML: A Language for Describing Data Driven Models of Neurons and Networks with a High Degree of Biological Detail
Cited by: 284
Author(s): Padraig Gleeson, Sharon Crook, Robert C. Cannon, Michael L. Hines, Guy O Billings, Matteo Farinella, Thomas M. Morse, Andrew P. Davison, Subhasis Ray, Upinder S. Bhalla, Simon R Barnes, Yoana D Dimitrova, R. Angus Silver
Software Mentions: 5
Published: over 14 years ago

10.3389/fnins.2019.00231

SpiNNTools: The Execution Engine for the SpiNNaker Platform
Cited by: 24
Author(s): Andrew Rowley, Christian Brenninkmeijer, Simon Davidson, Donal Fellows, Andrew Gait, David Lester, Luis A. Plana, Oliver Rhodes, Alan B. Stokes, Steve Furber
Software Mentions: 5
Published: over 5 years ago

10.7717/peerj-cs.159

Temporal constrained objects for modelling neuronal dynamics
Cited by: 0
Author(s): Manjusha Nair, Jinesh M. Kannimoola, Bharat Jayaraman, Bipin G. Nair, Shyam Diwakar
Software Mentions: 4
Published: about 6 years ago

10.3389/fninf.2014.00043

Efficient generation of connectivity in neuronal networks from simulator-independent descriptions
Cited by: 8
Author(s): Mikael Djurfeldt, Andrew P. Davison, Jochen Martin Eppler
Software Mentions: 4
Published: over 10 years ago

10.3389/fninf.2018.00090

Reproducible Neural Network Simulations: Statistical Methods for Model Validation on the Level of Network Activity Data
Cited by: 24
Author(s): Robin Gutzen, Michael von Papen, Guido Trensch, Pietro Quaglio, Sonja Grün, Michael Denker
Software Mentions: 4
Published: almost 6 years ago

10.3389/fninf.2015.00024

NeuroManager: a workflow analysis based simulation management engine for computational neuroscience
Cited by: 12
Author(s): David B. Stockton, Fidel Santamarı́a
Software Mentions: 4
Published: almost 9 years ago

10.1371/journal.pcbi.1008114

HippoUnit: A software tool for the automated testing and systematic comparison of detailed models of hippocampal neurons based on electrophysiological data
Cited by: 9
Author(s): Sára Saray, Christian Rössert, Shailesh Appukuttan, Rosanna Migliore, Paola Vitale, Carmen Alina Lupaşcu, Luca Bologna, Werner Van Geit, Armando Romani, Andrew Davison, Eilif Müller, Tamás F. Freund, Szabolcs Káli
Software Mentions: 4
Published: over 3 years ago

10.4056/sigs.5279417

Meeting report from the fourth meeting of the Computational Modeling in Biology Network (COMBINE)
Cited by: 21
Author(s): Dagmar Waltemath, Frank Bergmann, Claudine Chaouiya, Tobias Czauderna, Padraig Gleeson, Carole Goble, Martin Golebiewski, Michael Hucka, Nick Juty, Olga Krebs, Nicolas Le Novère, Huaiyu Mi, Ion I. Moraru, Chris J. Myers, David Nickerson, Brett G. Olivier, Nicolás Rodríguez, Falk Schreiber, Lucian P. Smith, Fengkai Zhang, Eric Bonnet
Software Mentions: 4
Published: over 10 years ago

10.1038/s41598-018-28999-2

Spiking neurons with short-term synaptic plasticity form superior generative networks
Cited by: 22
Author(s): Luziwei Leng, Roman Martel, Oliver Breitwieser, Ilja Bytschok, Walter Senn, Johannes Schemmel, K. Meier, Mihai A. Petrovici
Software Mentions: 4
Published: about 6 years ago

10.1371/journal.pcbi.1003376

Current Practice in Software Development for Computational Neuroscience and How to Improve It
Cited by: 27
Author(s): Marc‐Oliver Gewaltig, Robert C. Cannon
Software Mentions: 4
Published: over 10 years ago

10.1371/journal.pcbi.1005467

ARACHNE: A neural-neuroglial network builder with remotely controlled parallel computing
Cited by: 15
Author(s): Sergey G. Aleksin, Kaiyu Zheng, Dmitri A. Rusakov, Leonid P. Savtchenko
Software Mentions: 4
Published: over 7 years ago

10.1371/journal.pone.0028956

A Federated Design for a Neurobiological Simulation Engine: The CBI Federated Software Architecture
Cited by: 14
Author(s): Hugo Cornelis, Allan D Coop, James M. Bower
Software Mentions: 4
Published: over 12 years ago

10.1371/journal.pone.0018539

Democratic Population Decisions Result in Robust Policy-Gradient Learning: A Parametric Study with GPU Simulations
Cited by: 13
Author(s): Paul Richmond, Lars Buesing, Michèle Giugliano, Eleni Vasilaki
Software Mentions: 4
Published: over 13 years ago

10.3389/fnins.2018.00816

sPyNNaker: A Software Package for Running PyNN Simulations on SpiNNaker
Cited by: 54
Author(s): Oliver Rhodes, Petrut Bogdan, Christian Brenninkmeijer, Simon Davidson, Donal Fellows, Andrew Gait, David Lester, Mantas Mikaitis, Luis A. Plana, Andrew Rowley, Alan B. Stokes, Steve Furber
Software Mentions: 4
Published: almost 6 years ago

10.3389/fncom.2013.00112

Anisotropic connectivity implements motion-based prediction in a spiking neural network
Cited by: 10
Author(s): Bernhard Kaplan, Anders Lansner, Guillaume S. Masson, Laurent Perrinet
Software Mentions: 4
Published: over 11 years ago

10.1186/1471-2202-13-S1-P13

A high-level, simulator independent, Python library for simulating small networks of multicompartmental neurons
Cited by: 0
Author(s): Michael Hull, David Willshaw
Software Mentions: 4
Published: about 12 years ago

10.3389/fninf.2021.713899

The EBRAINS NeuroFeatureExtract: An Online Resource for the Extraction of Neural Activity Features From Electrophysiological Data
Cited by: 2
Author(s): Luca Bologna, Roberto Smiriglia, Dario Curreri, Michele Migliore
Software Mentions: 4
Published: about 3 years ago

10.3389/fninf.2018.00018

Credibility, Replicability, and Reproducibility in Simulation for Biomedicine and Clinical Applications in Neuroscience
Cited by: 32
Author(s): Lealem Mulugeta, Andrew Drach, Ahmet Erdemir, C. Anthony Hunt, Marc Horner, Joy P. Ku, Jerry G. Myers, Rajanikanth Vadigepalli, William W. Lytton
Software Mentions: 4
Published: over 6 years ago

10.3389/fninf.2013.00043

Neural system prediction and identification challenge
Cited by: 3
Author(s): Ioannis Vlachos, Yury V. Zaytsev, Sebastian Spreizer, Ad Aertsen, Arvind Kumar
Software Mentions: 4
Published: over 11 years ago

10.3389/fnins.2015.00380

Benchmarking neuromorphic systems with Nengo
Cited by: 0
Author(s): Trevor Bekolay, Terrence C. Stewart, Chris Eliasmith
Software Mentions: 4
Published: almost 9 years ago

10.3389/fninf.2018.00087

Xolotl: An Intuitive and Approachable Neuron and Network Simulator for Research and Teaching
Cited by: 10
Author(s): Srinivas Gorur-Shandilya, Alec Hoyland, Eve Marder
Software Mentions: 4
Published: almost 6 years ago

10.3389/fninf.2013.00048

Nengo: a Python tool for building large-scale functional brain models
Cited by: 300
Author(s): Trevor Bekolay, James Bergstra, Eric Hunsberger, Travis DeWolf, Terrence C. Stewart, Daniel Rasmussen, Xuan Choo, Aaron R. Voelker, Chris Eliasmith
Software Mentions: 4
Published: over 10 years ago

10.3389/fninf.2018.00020

Challenges in Reproducibility, Replicability, and Comparability of Computational Models and Tools for Neuronal and Glial Networks, Cells, and Subcellular Structures
Cited by: 20
Author(s): Tiina Manninen, Jugoslava Aćimović, Riikka Havela, Heidi Teppola, Marja-Leena Linne
Software Mentions: 4
Published: over 6 years ago

10.3389/fnins.2016.00496

Benchmarking Spike-Based Visual Recognition: A Dataset and Evaluation
Cited by: 27
Author(s): Qian Liu, Garibaldi Pineda García, Evangelos Stromatias, Teresa Serrano-Gotarredona, Steve Furber
Software Mentions: 3
Published: almost 8 years ago

10.1371/journal.pcbi.1000519

Network-State Modulation of Power-Law Frequency-Scaling in Visual Cortical Neurons
Cited by: 63
Author(s): Sami El Boustani, Olivier Marre, Sebastien Béhuret, Pierre Yves Baudot, Pierre Yger, Thierry Bal, Alain Destexhe, Yves Frégnac
Software Mentions: 3
Published: almost 15 years ago

10.3389/fnins.2020.00486

Periodicity Pitch Perception
Cited by: 2
Author(s): F. Klefenz, Tamás Harczos
Software Mentions: 3
Published: over 4 years ago

10.3389/fnins.2015.00491

Comparing Neuromorphic Solutions in Action: Implementing a Bio-Inspired Solution to a Benchmark Classification Task on Three Parallel-Computing Platforms
Cited by: 37
Author(s): Alan Diamond, Thomas Nowotny, Michael Schmuker
Software Mentions: 3
Published: over 8 years ago

10.3389/fninf.2013.00034

Integrated workflows for spiking neuronal network simulations
Cited by: 9
Author(s): Ján Antolík, Andrew P. Davison
Software Mentions: 3
Published: over 11 years ago

10.3389/fnbot.2019.00077

Generating Pointing Motions for a Humanoid Robot by Combining Motor Primitives
Cited by: 10
Author(s): J. Camilo Vasquez Tieck, T. Schnell, Jacques Kaiser, Felix Mauch, Arne Roennau, Ruediger Dillmann
Software Mentions: 3
Published: about 5 years ago

10.3389/fninf.2014.00010

Neo: an object model for handling electrophysiology data in multiple formats
Cited by: 94
Author(s): Samuel Garcia, Domenico Guarino, Florent Jaillet, Todd R. Jennings, Robert Pröpper, Philipp L. Rautenberg, Chris C. Rodgers, Andrey Sobolev, Thomas Wachtler, Pierre Yger, Andrew P. Davison
Software Mentions: 3
Published: over 10 years ago

10.1371/journal.pcbi.1008927

Embedding optimization reveals long-lasting history dependence in neural spiking activity
Cited by: 6
Author(s): Lucas Rudelt, D Marx, Michael Wibral, Viola Priesemann
Software Mentions: 3
Published: over 3 years ago

10.3389/fncir.2014.00001

N2A: a computational tool for modeling from neurons to algorithms
Cited by: 16
Author(s): Fredrick Rothganger, Christina E. Warrender, Derek Trumbo, James B. Aimone
Software Mentions: 3
Published: over 10 years ago

10.3389/fnins.2018.00213

An FPGA-Based Massively Parallel Neuromorphic Cortex Simulator
Cited by: 38
Author(s): Runchun Wang, Chetan Singh Thakur, André van Schaik
Software Mentions: 3
Published: over 6 years ago

10.3389/fncel.2021.622870

Towards a Bio-Inspired Real-Time Neuromorphic Cerebellum
Cited by: 8
Author(s): Petrut Bogdan, Beatrice Marcinnò, Claudia Casellato, Stefano Casali, Andrew Rowley, Michael Hopkins, Francesco Leporati, Egidio D’Angelo, Oliver Rhodes
Software Mentions: 3
Published: over 3 years ago

10.3389/fninf.2012.00026

Supercomputers Ready for Use as Discovery Machines for Neuroscience
Cited by: 54
Author(s): Moritz Helias, Susanne Kunkel, Gen Masumoto, Jun Igarashi, Jochen Martin Eppler, Shin Ishii, Tomoki Fukai, Abigail Morrison, Markus Diesmann
Software Mentions: 3
Published: over 12 years ago

10.3389/fninf.2017.00030

Constructing Neuronal Network Models in Massively Parallel Environments
Cited by: 33
Author(s): Tammo Ippen, Jochen Martin Eppler, Hans Ekkehard Pleßer, Markus Diesmann
Software Mentions: 3
Published: over 7 years ago

10.3389/fnins.2018.00698

A Scalable FPGA Architecture for Randomly Connected Networks of Hodgkin-Huxley Neurons
Cited by: 20
Author(s): Kaveh Akbarzadeh-Sherbaf, Behrooz Abdoli, Saeed Safari, Abdol-Hossein Vahabie
Software Mentions: 3
Published: almost 6 years ago

10.1038/srep18854

GeNN: a code generation framework for accelerated brain simulations
Cited by: 109
Author(s): Esin Yavuz, James P. Turner, Thomas Nowotny
Software Mentions: 3
Published: over 8 years ago

10.3389/fnins.2018.00891

Large-Scale Neuromorphic Spiking Array Processors: A Quest to Mimic the Brain
Cited by: 174
Author(s): Chetan Singh Thakur, Jamal Lottier Molin, Gert Cauwenberghs, Giacomo Indiveri, Kundan Kumar, Ning Qiao, Johannes Schemmel, Runchun Wang, Elisabetta Chicca, Jennifer Hasler, Jae-sun Seo, Shimeng Yu, Yu Cao, André van Schaik, Ralph Etienne‐Cummings
Software Mentions: 2
Published: almost 6 years ago

10.1186/1471-2202-12-S1-P330

NineML: the network interchange for ne uroscience modeling language
Cited by: 25
Author(s): Ivan Raikov, Robert C. Cannon, Robert Clewley, Hugo Cornelis, Andrew Davison, Erik De Schutter, Mikael Djurfeldt, Padraig Gleeson, Anatoli Gorchetchnikov, Hans Ekkehard Pleßer, Sean Hill, Mike Hines, Birgit Kriener, Yann Le Franc, Chung-Chan Lo, Abigail Morrison, Eilif Müller, Subhasis Ray, Lars Schwabe, Botond Szatmáry
Software Mentions: 2
Published: about 13 years ago

10.1186/1471-2202-13-S1-P150

Exploring the functional implications of brain architecture and connectivity: a multi-simulator framework for biophysical neuronal models
Cited by: 1
Author(s): Thomas G Close, Ivan Raikov, Mario Negrello, Shyam Kumar, Erik De Schutter
Software Mentions: 2
Published: about 12 years ago

10.1186/1471-2202-15-S1-P101

The neuroscience gateway portal: high performance computing made easy
Cited by: 13
Author(s): Ted Carnevale, Amit Majumdar, Subha Sivagnanam, Kenneth Yoshimoto, Vadim A. Soloshonok, Anita Bandrowski, Maryann E. Martone
Software Mentions: 2
Published: about 10 years ago

10.1186/1471-2202-14-S1-P93

Exploring the limitations of simulator independence via an implementation of a biophysically detailed cerebellar cortex model in NEURON and NEST
Cited by: 0
Author(s): Thomas G Close, Ivan Raikov, Shyam Kumar, Erik De Schutter
Software Mentions: 2
Published: about 11 years ago

10.1007/s00422-019-00797-7

An unsupervised neuromorphic clustering algorithm
Cited by: 15
Author(s): Alan Diamond, Michael Schmuker, Thomas Nowotny
Software Mentions: 2
Published: over 5 years ago

10.1098/rsta.2019.0160

Real-time cortical simulation on neuromorphic hardware
Cited by: 36
Author(s): Oliver Rhodes, Luca Peres, Andrew Rowley, Andrew Gait, Luis A. Plana, Christian Brenninkmeijer, Steve Furber
Software Mentions: 2
Published: over 4 years ago

10.1371/journal.pone.0108590

Characterization and Compensation of Network-Level Anomalies in Mixed-Signal Neuromorphic Modeling Platforms
Cited by: 41
Author(s): Mihai A. Petrovici, Bernhard Vogginger, Paul Müller, Oliver Breitwieser, Mikael Lundqvist, Lyle Muller, Matthias Ehrlich, Alain Destexhe, Anders Lansner, René Schüffny, Johannes Schemmel, K. Meier
Software Mentions: 2
Published: almost 10 years ago

10.1371/journal.pone.0068910

BrainNet Viewer: A Network Visualization Tool for Human Brain Connectomics
Cited by: 2,758
Author(s): Mingrui Xia, Jinhui Wang, Yong He
Software Mentions: 2
Published: about 11 years ago

10.3389/fncel.2015.00220

Network-timing-dependent plasticity
Cited by: 13
Author(s): Vincent Delattre, Daniel Keller, Matthew G. Perich, Henry Markram, Eilif Müller
Software Mentions: 2
Published: over 9 years ago

10.3389/fncel.2021.674030

SyNC, a Computationally Extensive and Realistic Neural Net to Identify Relative Impacts of Synaptopathy Mechanisms on Glutamatergic Neurons and Their Networks in Autism and Complex Neurological Disorders
Cited by: 1
Author(s): Rounak Chatterjee, Janet L. Paluh, Souradeep Chowdhury, Soham Mondal, Arnab Raha, Amitava Mukherjee
Software Mentions: 2
Published: about 3 years ago

10.3389/fncom.2015.00013

Probabilistic inference in discrete spaces can be implemented into networks of LIF neurons
Cited by: 17
Author(s): Dimitri Probst, Mihai A. Petrovici, Ilja Bytschok, Johannes Bill, Dejan Pecevski, Johannes Schemmel, K. Meier
Software Mentions: 2
Published: over 9 years ago

10.3389/fncom.2017.00071

Binary Associative Memories as a Benchmark for Spiking Neuromorphic Hardware
Cited by: 3
Author(s): Andreas Stöckel, Christoph Jenzen, Michael Thies, Ulrich Rückert
Software Mentions: 2
Published: about 7 years ago

10.3389/fncir.2016.00037

Push-Pull Receptive Field Organization and Synaptic Depression: Mechanisms for Reliably Encoding Naturalistic Stimuli in V1
Cited by: 34
Author(s): Jens Kremkow, Laurent Perrinet, Cyril Monier, José-Mañuel Alonso, Ad Aertsen, Yves Frégnac, Guillaume S. Masson
Software Mentions: 2
Published: over 8 years ago

10.3389/fninf.2018.00081

Rigorous Neural Network Simulations: A Model Substantiation Methodology for Increasing the Correctness of Simulation Results in the Absence of Experimental Validation Data
Cited by: 12
Author(s): Guido Trensch, Robin Gutzen, Inga Blundell, Michael Denker, Abigail Morrison
Software Mentions: 2
Published: almost 6 years ago

10.3389/fninf.2014.00073

PyNCS: a microkernel for high-level definition and configuration of neuromorphic electronic systems
Cited by: 14
Author(s): Fabio Stefanini, Emre Neftci, Sadique Sheik, Giacomo Indiveri
Software Mentions: 2
Published: about 10 years ago

10.3389/fninf.2016.00026

Handling Metadata in a Neurophysiology Laboratory
Cited by: 27
Author(s): Lyuba Zehl, Florent Jaillet, Stoewer Adrian, Jan Grewe, Andrey Sobolev, Thomas Wachtler, Thomas Brochier, Alexa Riehle, Michael Denker, Sonja Grün
Software Mentions: 2
Published: about 8 years ago

10.3389/fnbot.2017.00002

Connecting Artificial Brains to Robots in a Comprehensive Simulation Framework: The Neurorobotics Platform
Cited by: 86
Author(s): Egidio Falotico, Lorenzo Vannucci, Alessandro Ambrosano, Ugo Albanese, Stefan Ulbrich, J. Camilo Vasquez Tieck, Georg Hinkel, Jacques Kaiser, Igor Peric, Oliver Denninger, Nino Cauli, Murat Kırtay, Arne Roennau, Gudrun Klinker, Axel von Arnim, Luc Guyot, Daniel Peppicelli, Pablo Martínez‐Cañada, Eduardo Ros, Patrick Maier, Sandro Weber, Manuel Huber, David A. Plecher, Florian Röhrbein, Stefan Deser, Alina Roitberg, Patrick van der Smagt, R. Dillman, Paul Levi, Cecilia Laschi, Alois Knoll, Marc‐Oliver Gewaltig
Software Mentions: 2
Published: over 7 years ago

10.3389/fnbot.2018.00079

CABots and Other Neural Agents
Cited by: 4
Author(s): Christian R. Huyck, Ian Mitchell
Software Mentions: 2
Published: almost 6 years ago

10.3389/fnins.2018.00105

Neuromodulated Synaptic Plasticity on the SpiNNaker Neuromorphic System
Cited by: 22
Author(s): Mantas Mikaitis, Garibaldi Pineda García, James C. Knight, Steve Furber
Software Mentions: 2
Published: over 6 years ago

10.3389/fnins.2020.590164

A New Spiking Convolutional Recurrent Neural Network (SCRNN) With Applications to Event-Based Hand Gesture Recognition
Cited by: 36
Author(s): Yannan Xing, Gaetano Di Caterina, John J. Soraghan
Software Mentions: 2
Published: almost 4 years ago

10.3389/fnins.2018.00434

Structural Plasticity on the SpiNNaker Many-Core Neuromorphic System
Cited by: 13
Author(s): Petrut Bogdan, Andrew Rowley, Oliver Rhodes, Steve Furber
Software Mentions: 2
Published: about 6 years ago

10.3389/fnins.2013.00011

Six Networks on a Universal Neuromorphic Computing Substrate
Cited by: 147
Author(s): Thomas Pfeil, Andreas Grübl, Sebastian Jeltsch, Eric Müller, Paul Müller, Mihai A. Petrovici, Michael Schmuker, Daniel Brüderle, Johannes Schemmel, K. Meier
Software Mentions: 2
Published: over 11 years ago

10.3389/fnins.2020.00276

Editorial: Spiking Neural Network Learning, Benchmarking, Programming and Executing
Cited by: 3
Author(s): Guoqi Li, Lei Deng, Yansong Chua, Peng Li, Emre Neftci, Haizhou Li
Software Mentions: 2
Published: over 4 years ago

10.3389/fnins.2017.00454

A Spiking Neural Network Model of the Lateral Geniculate Nucleus on the SpiNNaker Machine
Cited by: 9
Author(s): Basabdatta Sen Bhattacharya, Teresa Serrano-Gotarredona, Lorinc Balassa, Akash Bhattacharya, Alan B. Stokes, Andrew Rowley, Indar Sugiarto, Steve Furber
Software Mentions: 2
Published: about 7 years ago

10.3389/fnins.2018.00291

Performance Comparison of the Digital Neuromorphic Hardware SpiNNaker and the Neural Network Simulation Software NEST for a Full-Scale Cortical Microcircuit Model
Cited by: 104
Author(s): Sacha J. van Albada, Andrew Rowley, Johanna Senk, Michael Hopkins, Maximilian Schmidt, Alan B. Stokes, David Lester, Markus Diesmann, Steve Furber
Software Mentions: 2
Published: over 6 years ago

10.3389/fnins.2015.00516

NeuroFlow: A General Purpose Spiking Neural Network Simulation Platform using Customizable Processors
Cited by: 65
Author(s): Kit Cheung, Simon R. Schultz, Wayne Luk
Software Mentions: 2
Published: over 8 years ago

10.3389/fnsys.2020.00031

Experimental and Computational Study on Motor Control and Recovery After Stroke: Toward a Constructive Loop Between Experimental and Virtual Embodied Neuroscience
Cited by: 20
Author(s): Anna Letizia Allegra Mascaro, Egidio Falotico, Spase Petkoski, Maria Pasquini, Lorenzo Vannucci, Núria Tort-Colet, Emilia Conti, Francesco Resta, Cristina Spalletti, Shravan Tata Ramalingasetty, Axel von Arnim, Emanuele Formento, Emmanouil Angelidis, Camilla H. Blixhavn, Trygve B. Leergaard, Matteo Caleo, Alain Destexhe, Auke Jan Ijspeert, Silvestro Micera, Cecilia Laschi, Viktor K. Jirsa, Marc‐Oliver Gewaltig, Francesco S. Pavone
Software Mentions: 2
Published: about 4 years ago

10.1098/rsfs.2018.0007

Spiking neural networks for computer vision
Cited by: 29
Author(s): Michael Hopkins, Garibaldi Pineda García, Petrut Bogdan, Steve Furber
Software Mentions: 2
Published: over 6 years ago

10.3390/s17112591

An Investigation into Spike-Based Neuromorphic Approaches for Artificial Olfactory Systems
Cited by: 25
Author(s): Anup Vanarse, Adam Osseiran, Alexander Rassau
Software Mentions: 2
Published: almost 7 years ago

10.1113/JP276356

A simple decision to move in response to touch reveals basic sensory memory and mechanisms for variable response times
Cited by: 17
Author(s): Stella Koutsikou, Robert Merrison-Hort, Edgar Buhl, Andrea Ferrario, Wen‐Chang Li, Roman Borisyuk, Stephen R Soffe, Alan Roberts
Software Mentions: 2
Published: about 6 years ago

Projects: pypi: PyNN

Papers Mentioning PyNN 131