Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.3389/fninf.2016.00008

https://doi.org/10.3389/fninf.2016.00008

PyRhO: A Multiscale Optogenetics Simulation Platform

Cited by: 20
Author(s): Benjamin D. Evans, Sarah Jarvis, Simon R. Schultz, Konstantin Nikolić
Published: almost 9 years ago

Software Mentions 9

pypi: Brian2

A clock-driven simulator for spiking neural networks
Papers that mentioned: 27

pypi: lmfit

Least-Squares Minimization with Bounds and Constraints
Papers that mentioned: 55

pypi: matplotlib

Python plotting package
Papers that mentioned: 1,045

pypi: NEURON

Empirically-based simulator for modeling neurons and networks of neurons
Papers that mentioned: 766

pypi: NMODL

NEURON Modeling Language Source-to-Source Compiler Framework
Papers that mentioned: 34

pypi: numpy

Fundamental package for array computing in Python
Papers that mentioned: 832

pypi: PyNN

A Python package for simulator-independent specification of neuronal network models
Papers that mentioned: 131

pypi: PyRhO

Fit and characterise rhodopsin photocurrents
Papers that mentioned: 3

pypi: scipy

Fundamental algorithms for scientific computing in Python
Papers that mentioned: 1,071