Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pone.0201630

https://doi.org/10.1371/journal.pone.0201630

BioNet: A Python interface to NEURON for modeling large-scale networks

Cited by: 49
Author(s): Sergey L. Gratiy, Yazan N. Billeh, Kael Dai, Catalin Mitelut, David Feng, Nathan W. Gouwens, Nicholas Cain, Christof Koch, Costas A. Anastassiou, Anton Arkhipov
Published: over 6 years ago

Software Mentions 5

bioconductor: BioNet
Routines for the functional analysis of biological networks
Papers that mentioned: 40
bioconductor: GENESIS
GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with population structure and/or relatedness
Papers that mentioned: 243
pypi: LFPy
A module for modeling extracellular potentials of multicompartment neuron models built on NEURON
Papers that mentioned: 33
pypi: NEURON
Empirically-based simulator for modeling neurons and networks of neurons
Papers that mentioned: 766
pypi: PyNN
A Python package for simulator-independent specification of neuronal network models
Papers that mentioned: 131