Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.7554/eLife.47314

https://doi.org/10.7554/eLife.47314

Cited by: 372
Author(s): Marcel Stimberg, Romain Brette, Dan F. M. Goodman
Published: over 4 years ago

Software Mentions 10

bioconductor: GENESIS
GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with population structure and/or relatedness
Papers that mentioned: 243
pypi: ANNarchy
Artificial Neural Networks architect
Papers that mentioned: 14
pypi: Brian2
A clock-driven simulator for spiking neural networks
Papers that mentioned: 27
pypi: Brian2GeNN
An interface to use the GeNN framework as a device in Brian 2
Papers that mentioned: 7
pypi: NESTML
NESTML is a domain specific language that supports the specification of neuron models in a precise and concise syntax, based on the syntax of Python. Model equations can either be given as a simple string of mathematical notation or as an algorithm written in the built-in procedural language. The equations are analyzed by NESTML to compute an exact solution if possible or use an appropriate numeric solver otherwise.
Papers that mentioned: 10
pypi: NEURON
Empirically-based simulator for modeling neurons and networks of neurons
Papers that mentioned: 766
pypi: NMODL
NEURON Modeling Language Source-to-Source Compiler Framework
Papers that mentioned: 34
pypi: PyLEMS
A Python library for working with the Low Entropy Model Specification language (LEMS)
Papers that mentioned: 7
pypi: PyNN
A Python package for simulator-independent specification of neuronal network models
Papers that mentioned: 131
pypi: weave
A toolkit for building composable interactive data driven applications.
Papers that mentioned: 2