Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pcbi.1008386

https://doi.org/10.1371/journal.pcbi.1008386

Brain Modeling ToolKit: An open source software suite for multiscale modeling of brain circuits

Cited by: 28
Author(s): Kael Dai, Sergey L. Gratiy, Yazan N. Billeh, Richard Xu, Bin Cai, Nicholas Cain, Atle E Rimehaug, A. Stasik, Gaute T. Einevoll, Ştefan Mihalaş, Christof Koch, Anton Arkhipov
Published: about 4 years ago

Software Mentions 6

bioconductor: BioNet
Routines for the functional analysis of biological networks
Papers that mentioned: 40
bioconductor: GENESIS
GENetic EStimation and Inference in Structured samples (GENESIS): Statistical methods for analyzing genetic data from samples with population structure and/or relatedness
Papers that mentioned: 243
pypi: LFPy
A module for modeling extracellular potentials of multicompartment neuron models built on NEURON
Papers that mentioned: 33
pypi: NEURON
Empirically-based simulator for modeling neurons and networks of neurons
Papers that mentioned: 766
pypi: pyNeuroML
Python utilities for NeuroML
Papers that mentioned: 3
pypi: PyNN
A Python package for simulator-independent specification of neuronal network models
Papers that mentioned: 131