cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0235726

Diversity of mosquitoes (Diptera: Culicidae) collected in different types of larvitraps in an Amazon rural settlement
Cited by: 8
Author(s): João Aprígio Guerra de Almeida, Heliana Christy Matos Belchior, Claudia María Ríos-Velásquez, Felipe Arley Costa Pessoa
Software Mentions: 6
Published: about 4 years ago

10.1038/s41598-019-51452-x

NADH dehydrogenases Nuo and Nqr1 contribute to extracellular electron transfer by Shewanella oneidensis MR-1 in bioelectrochemical systems
Cited by: 15
Author(s): Cody S. Madsen, Michaela A. TerAvest
Software Mentions: 6
Published: about 5 years ago

10.1371/journal.pone.0237272

Passenger-surface microbiome interactions in the subway of Mexico City
Cited by: 10
Author(s): Daniela Vargas-Robles, Carolina Gonzalez-Cedillo, Apolinar M. Hernández, Luis David Alcaraz, Mariana Peimbert
Software Mentions: 6
Published: over 4 years ago

10.1038/s41598-019-50864-z

Circular RNA differential expression in blood cell populations and exploration of circRNA deregulation in pediatric acute lymphoblastic leukemia
Cited by: 62
Author(s): Enrico Gaffo, Elena Boldrin, Anna Dal Molin, Silvia Bresolin, Annagiulia Bonizzato, Luca Trentin, Chiara Frasson, Klaus‐Michael Debatin, Lueder Hinrich Meyer, Geertruy te Kronnie, Stefania Bortoluzzi
Software Mentions: 6
Published: about 5 years ago

10.1038/s41598-019-50839-0

Understanding the phyllosphere microbiome assemblage in grape species (Vitaceae) with amplicon sequence data structures
Cited by: 36
Author(s): Prashant Singh, Sylvain Santoni, Audrey Weber, Patrice This, Jean‐Pierre Péros
Software Mentions: 6
Published: about 5 years ago

10.1371/journal.pone.0237713

Isn’t high school bad enough already? Rates of gender harassment and institutional betrayal in high school and their association with trauma-related symptoms
Cited by: 9
Author(s): Monika N Lind, Alexis A. Adams-Clark, Jennifer J. Freyd
Software Mentions: 6
Published: over 4 years ago

10.3390/ijms20061321

Cellular Gene Expression during Hepatitis C Virus Replication as Revealed by Ribosome Profiling
Cited by: 14
Author(s): Gesche K. Gerresheim, Jochen Bathke, Audrey M. Michel, Dmitry E. Andreev, Lyudmila Shalamova, Oliver Roßbach, Pan Hu, Dieter Glebe, Markus Fricke, Manja Marz, Alexander Goesmann, Stephen J Kiniry, Pavel V. Baranov, Ivan N. Shatsky, Michael Niepmann
Software Mentions: 6
Published: over 5 years ago

10.1038/s41598-019-50811-y

Pollinators enhance crop yield and shorten the growing season by modulating plant functional characteristics: A comparison of 23 canola varieties
Cited by: 21
Author(s): George C. Adamidis, Ralph V. Cartar, Andony Melathopoulos, Stephen F. Pernal, Shelley E Hoover
Software Mentions: 6
Published: about 5 years ago

10.1038/s41598-019-50248-3

Integrated network analysis identifies hsa-miR-4756-3p as a regulator of FOXM1 in Triple Negative Breast Cancer
Cited by: 6
Author(s): Yuanliang Gu, Wenjuan Wang, Xuyao Wang, Hong-Yi Xie, Xiaojuan Ye, Peng Shu
Software Mentions: 6
Published: about 5 years ago

10.1371/journal.pone.0215192

Circulating Th17.1 cells as candidate for the prediction of therapeutic response to abatacept in patients with rheumatoid arthritis: An exploratory research
Cited by: 17
Author(s): Shinji Maeda, Satoshi Osaga, Tomoyo Maeda, Norihisa Takeda, Shinya Tamechika, Taio Naniwa, Akio Niimi
Software Mentions: 6
Published: about 5 years ago

10.1038/s41598-019-49027-x

Association of Aggresomes with Survival Outcomes in Pediatric Medulloblastoma
Cited by: 4
Author(s): Maha Yehia, Hala Taha, Asmaa Salama, Nada Amer, Amal Mosaab, Omneya Hassanain, Amal Refaat, Dina Yassin, Ahmed Elhemaly, Soha Ahmed, Mohamed El-Beltagy, Osama Shaalan, Shahenda El‐Naggar
Software Mentions: 6
Published: about 5 years ago

10.1371/journal.pone.0109760

Copy Number Loss of the Interferon Gene Cluster in Melanomas Is Linked to Reduced T Cell Infiltrate and Poor Patient Prognosis
Cited by: 164
Author(s): Peter S. Linsley, Cate Speake, Elizabeth Whalen, Damien Chaussabel
Software Mentions: 6
Published: about 10 years ago

10.1371/journal.pone.0256678

Hospital-level factors associated with death during pneumonia-associated hospitalization among adults—New York City, 2010–2014
Cited by: 0
Author(s): Kate Whittemore, Kristian M. Garcia, Chaorui Huang, Sungwoo Lim, Demetre Daskalakis, Neil M. Vora, David E. Lucero
Software Mentions: 6
Published: about 3 years ago

10.1371/journal.pone.0226501

pyKNEEr: An image analysis workflow for open and reproducible research on femoral knee cartilage
Cited by: 11
Author(s): Serena Bonaretti, Garry E. Gold, Gary S. Beaupré
Software Mentions: 6
Published: almost 5 years ago

10.1371/journal.pone.0236200

Shelter use interactions of invasive lionfish with commercially and ecologically important native invertebrates on Caribbean coral reefs
Cited by: 6
Author(s): Christina L. Hunt, Dominic A. Andradi‐Brown, Callum J. Hudson, Joshua Bennett-Williams, Frankie Noades, Jocelyn Curtis-Quick, Owen T. Lewis, Dan A. Exton
Software Mentions: 6
Published: over 4 years ago

10.1371/journal.pone.0245445

Three-dimensional geometric morphometric studies of modern human occipital variation
Cited by: 7
Author(s): Yameng Zhang, Lynne A. Schepartz
Software Mentions: 6
Published: almost 4 years ago

10.1038/s41598-019-45844-2

Intracellular Zn2+ transients modulate global gene expression in dissociated rat hippocampal neurons
Cited by: 35
Author(s): Lynn Sanford, Margaret C. Carpenter, Amy E. Palmer
Software Mentions: 6
Published: over 5 years ago

10.1371/journal.pone.0185166

Sinking towards destiny: High throughput measurement of phytoplankton sinking rates through time-resolved fluorescence plate spectroscopy
Cited by: 10
Author(s): Catherine Bannon, Douglas A. Campbell
Software Mentions: 6
Published: about 7 years ago

10.1038/s41598-019-45365-y

Xylella fastidiosa: climate suitability of European continent
Cited by: 56
Author(s): Gottfried Martin, Astrid Cruaud, Jean‐Claude Streito, Jean‐Yves Rasplus, Jean‐Pierre Rossi
Software Mentions: 6
Published: over 5 years ago

10.1371/journal.pone.0239518

Peer review and preprint policies are unclear at most major journals
Cited by: 26
Author(s): Thomas Klebel, Stefan Reichmann, Jessica Polka, Gary S. McDowell, Naomi Penfold, Samantha Hindle, Tony Ross-Hellauer
Software Mentions: 6
Published: about 4 years ago

10.1038/s41598-019-45388-5

Identifying niche and fitness dissimilarities in invaded marine macroalgal canopies within the context of contemporary coexistence theory
Cited by: 9
Author(s): Graham Epstein, Stephen J. Hawkins, Dan A. Smale
Software Mentions: 6
Published: over 5 years ago

10.1038/s41423-021-00647-2

The microbiota is dispensable for the early stages of peripheral regulatory T cell induction within mesenteric lymph nodes
Cited by: 16
Author(s): Carolin Wiechers, Mangge Zou, Eric Galvez, Michael Beckstette, Maria F. Ebel, Till Strowig, Jochen Huehn, Joern Pezoldt
Software Mentions: 6
Published: over 3 years ago

10.1038/s41598-017-08844-8

Scale-dependent changes in the functional diversity of macrophytes in subtropical freshwater lakes in south China
Cited by: 16
Author(s): Hui Fu, Jun Zhong, Shaowen Fang, Jianmin Hu, Caixia Guo, Qian Lei, Guixiang Yuan, Taotao Dai, Zhongqiang Li, Meng Zhang, Wei Li, Jun Xu, Ting Cao
Software Mentions: 6
Published: over 7 years ago

10.1016/j.celrep.2019.06.039

Acute Iron Deprivation Reprograms Human Macrophage Metabolism and Reduces Inflammation In Vivo
Cited by: 67
Author(s): Marie Pereira, Tai‐Di Chen, Norzawani Buang, Antoni Olona, Jeong‐Hun Ko, Maria Prendecki, Ana S.H. Costa, Efterpi Nikitopoulou, Laura Tronci, Charles D. Pusey, H. Terence Cook, Stephen P. McAdoo, Christian Frezza, Jacques Behmoaras
Software Mentions: 6
Published: over 5 years ago

10.1016/j.celrep.2019.06.046

Breast Cancer Classification Based on Proteotypes Obtained by SWATH Mass Spectrometry
Cited by: 68
Author(s): Pavel Bouchal, Olga T. Schubert, Jakub Faktor, Lenka Čápková, Hana Imrichová, Karolína Zoufalová, Vendula Páralová, Roman Hrstka, Yansheng Liu, H. Alexander Ebhardt, Eva Budínská, Rudolf Nenutil, Ruedi Aebersold
Software Mentions: 6
Published: over 5 years ago

10.1038/s41598-017-01498-6

An optimal distance cutoff for contact-based Protein Structure Networks using side-chain centers of mass
Cited by: 64
Author(s): Juan Salamanca Viloria, Maria Francesca Allega, Matteo Lambrughi, Elena Papaleo
Software Mentions: 6
Published: over 7 years ago

10.1016/j.celrep.2019.12.019

Neuroinflammation-Associated Aspecific Manipulation of Mouse Predator Fear by Toxoplasma gondii
Cited by: 81
Author(s): Madlaina Boillat, Pierre‐Mehdi Hammoudi, Sunil Kumar Dogga, Stéphane Pagès, Maged Goubran, Iván Rodríguez, Dominique Soldati‐Favre
Software Mentions: 6
Published: almost 5 years ago

10.1016/j.celrep.2021.109362

Nutritional regulation of oligodendrocyte differentiation regulates perineuronal net remodeling in the median eminence
Cited by: 29
Author(s): Sara Kohnke, Sophie Buller, Danaé Nuzzaci, Katherine Ridley, Brian Lam, Helena Pivoňková, Marie A. Bentsen, Kimberly M. Alonge, Chao Zhao, John Tadross, Staffan Holmqvist, Takahiro Shimizu, Hannah A. Hathaway, Hui‐Liang Li, Wendy B. Macklin, Michael W. Schwartz, William D. Richardson, Giles S.H. Yeo, R. J. M. Franklin, Ragnhildur Thóra Káradóttir, David H. Rowitch, Clémence Blouet
Software Mentions: 6
Published: over 3 years ago

10.1016/j.xcrm.2021.100267

Cabozantinib and dasatinib synergize to induce tumor regression in non-clear cell renal cell carcinoma
Cited by: 2
Author(s): Hui Wen Lue, Daniel S. Derrick, Soumya Rao, Ahna Van Gaest, Larry C. Cheng, Jennifer Podolak, Samantha Lawson, Changhui Xue, Devin Garg, Ralph E. White, Christopher W. Ryan, Justin M. Drake, Anna Ritz, Laura M. Heiser, George V. Thomas
Software Mentions: 6
Published: over 3 years ago

10.1016/j.stem.2021.04.031

Naive stem cell blastocyst model captures human embryo lineage segregation
Cited by: 139
Author(s): Akira Yanagida, Daniel Spindlow, Jennifer Nichols, Anish Dattani, Austin Smith, Ge Guo
Software Mentions: 6
Published: over 3 years ago

10.1038/srep45371

Frugivore-Mediated Selection in A Habitat Transformation Scenario
Cited by: 15
Author(s): Francisco E. Fontúrbel, Rodrigo Medel
Software Mentions: 6
Published: over 7 years ago

10.3390/cells8060517

Fecal Microbiota Transplantation Controls Murine Chronic Intestinal Inflammation by Modulating Immune Cell Functions and Gut Microbiota Composition
Cited by: 46
Author(s): Claudia Burrello, Maria Rita Giuffrè, Angeli Dominique Macandog, Angélica Díaz‐Basabe, Fulvia Milena Cribiù, Gianluca Lopez, Francesca Borgo, Luigi Nezi, Flavio Caprioli, Maurizio Vecchi, Federica Facciotti
Software Mentions: 6
Published: over 5 years ago

10.3390/cells10030644

Highly Species-Specific Foliar Metabolomes of Diverse Woody Species and Relationships with the Leaf Economics Spectrum
Cited by: 7
Author(s): Rabea Schweiger, Eva Castells, Luca Da Sois, Jordi Martínez‐Vilalta, Caroline Müller
Software Mentions: 6
Published: over 3 years ago

10.3390/cells10061459

A Distinct Faecal Microbiota and Metabolite Profile Linked to Bowel Habits in Patients with Irritable Bowel Syndrome
Cited by: 19
Author(s): Bani Ahluwalia, Cristina Iribarren, Maria K. Magnusson, Johanna Sundin, Egbert Clevers, Otto Savolainen, Alastair B. Ross, Hans Törnblom, Magnus Simrén, Lena Öhman
Software Mentions: 6
Published: over 3 years ago

10.7554/eLife.45672

Tumor suppressor SMARCB1 suppresses super-enhancers to govern hESC lineage determination
Cited by: 27
Author(s): Lee Langer, James M. Ward, Trevor Archer
Software Mentions: 6
Published: over 5 years ago

10.3390/cells10040921

Sex-Biased lncRNA Signature in Fetal Growth Restriction (FGR)
Cited by: 2
Author(s): Aleksandra Lipka, J Jastrzebski, Łukasz Paukszto, Karol G Makowczenko, Elżbieta Łopieńska–Biernat, Marek Gowkielewicz, Ewa Lepiarczyk, Marta Wiszpolska, Mariusz Majewski, Marta Majewska
Software Mentions: 6
Published: over 3 years ago

10.1038/srep34220

Widespread DNA hypomethylation and differential gene expression in Turner syndrome
Cited by: 99
Author(s): Christian Trolle, Morten Muhlig Nielsen, Anne Skakkebæk, Philippe Lamy, Søren Vang, Jakob Hedegaard, Iver Nordentoft, Torben F. Ørntoft, Jakob Skou Pedersen, Claus Højbjerg Gravholt
Software Mentions: 6
Published: about 8 years ago

10.1038/srep33696

Driving forces of soil bacterial community structure, diversity, and function in temperate grasslands and forests
Cited by: 247
Author(s): Kristin Kaiser, Bernd Wemheuer, Vera Korolkow, Franziska Wemheuer, Heiko Nacke, Ingo Schöning, Marion Schrumpf, Rolf Daniel
Software Mentions: 6
Published: about 8 years ago

10.3390/cells9071571

Boosting the Intra-Articular Efficacy of Low Dose Corticosteroid through a Biopolymeric Matrix: An In Vivo Model of Osteoarthritis
Cited by: 12
Author(s): Matilde Tschon, Francesca Salamanna, Lúcia Martini, G. Giavaresi, Luca Lorenzini, Laura Calzà, Milena Fini
Software Mentions: 6
Published: over 4 years ago

10.1007/s12311-019-01029-1

The Effect of Cerebellar tDCS on Sequential Motor Response Selection
Cited by: 15
Author(s): Bryant J. Jongkees, Maarten A. Immink, Olga D. Boer, Fatemeh Yavari, Michael A. Nitsche, Lorenza S. Colzato
Software Mentions: 6
Published: over 5 years ago

10.1371/journal.ppat.1008179

Molecular dating and viral load growth rates suggested that the eclipse phase lasted about a week in HIV-1 infected adults in East Africa and Thailand
Cited by: 24
Author(s): Morgane Rolland, Sodsai Tovanabutra, Bethany L. Dearlove, Yifan Li, Christopher L. Owen, Éric Lewitus, Eric Sanders‐Buell, Meera Bose, Anne Marie O’Sullivan, Raabya Rossenkhan, Jan Phillipus Lourens Labuschagne, Paul T. Edlefsen, Daniel B. Reeves, Gustavo H. Kijak, Shana Miller, Kultida Poltavee, Jenica Lee, Lydia Bonar, Elizabeth A. Harbolick, Bahar Ahani, Phuc Pham, Hannah Kibuuka, Lucas Maganga, Sorachai Nitayaphan, Fred Sawe, Leigh Anne Eller, Robert A. Gramzinski, Jerome H. Kim, Nelson L. Michael, Merlin L. Robb
Software Mentions: 6
Published: almost 5 years ago

10.1002/ece3.6298

Convergent morphological responses to loss of flight in rails (Aves: Rallidae)
Cited by: 8
Author(s): Julien Gaspar, Gillian C. Gibb, Steven A. Trewick
Software Mentions: 6
Published: over 4 years ago

10.1371/journal.ppat.1007273

Trichuris muris whey acidic protein induces type 2 protective immunity against whipworm
Cited by: 18
Author(s): Neima Briggs, Junfei Wei, Leroy Versteeg, Bin Zhan, Brian Keegan, Ashish Damania, Jeroen Pollet, Kelly S. Hayes, Coreen M. Beaumier, Christopher A. Seid, Jamie Leong, Richard K. Grencis, María Elena Bottazzi, K. Jagannadha Sastry, Peter J. Hotez
Software Mentions: 6
Published: over 6 years ago

10.1371/journal.ppat.1007187

Epidemiological significance of dengue virus genetic variation in mosquito infection dynamics
Cited by: 39
Author(s): Albin Fontaine, Sébastian Lequime, Isabelle Moltini-Conclois, Davy Jiolle, Isabelle Leparc-Goffart, Robert C. Reiner, Louis Lambrechts
Software Mentions: 6
Published: over 6 years ago

10.1371/journal.ppat.1006967

KSHV induces immunoglobulin rearrangements in mature B lymphocytes
Cited by: 28
Author(s): Jennifer Totonchy, Jessica M. Osborn, Amy Chadburn, Romina Nabiee, Lissenya B. Argueta, Geoffrey Mikita, Ethel Cesarman
Software Mentions: 6
Published: over 6 years ago

10.1002/ece3.2360

Scale dependent drivers of wild bee diversity in tropical heterogeneous agricultural landscapes
Cited by: 32
Author(s): Prasenjit Basu, Arpan Kumar Parui, Sulagna Chatterjee, Arpan Dutta, Pushan Chakraborty, Stuart P. M. Roberts, Barbara Smith
Software Mentions: 6
Published: about 8 years ago

10.1371/journal.ppat.1003450

Novel Immunomodulators from Hard Ticks Selectively Reprogramme Human Dendritic Cell Responses
Cited by: 64
Author(s): Stephen G. Preston, Juraj Majtán, Chrisoula Kouremenou, Oliwia Ryśnik, Lena Fatou Burger, Alejandro Cabezas-Cruz, Maylin Chiong Guzman, Miles A. Nunn, Guido C. Paesen, Patricia A. Nuttall, Jonathan M. Austyn
Software Mentions: 6
Published: over 11 years ago

10.1002/ece3.2651

Multiscale habitat relationships of snowshoe hares (<scp>L</scp>epus americanus) in the mixed conifer landscape of the <scp>N</scp>orthern <scp>R</scp>ockies, <scp>USA</scp>: Cross‐scale effects of horizontal cover with implications for forest management
Cited by: 21
Author(s): Joseph D. Holbrook, John R. Squires, Lucretia E. Olson, Rick L. Lawrence, Shannon L. Savage
Software Mentions: 6
Published: almost 8 years ago

10.1186/s12903-018-0666-4

Validity of self-reported number of teeth in middle-aged Finnish adults: the Northern Finland Birth Cohort Study 1966
Cited by: 15
Author(s): Toni Similä, Pentti Nieminen, Jorma I. Virtanen
Software Mentions: 6
Published: almost 6 years ago

10.1002/ece3.4679

Responses of macroalgae to CO2 enrichment cannot be inferred solely from their inorganic carbon uptake strategy
Cited by: 48
Author(s): Luna M. van der Loos, Matthias Schmid, Pablo P. Leal, Christina M. McGraw, Damon Britton, Andrew T. Revill, Patti Virtue, Peter D. Nichols, Catriona L. Hurd
Software Mentions: 6
Published: almost 6 years ago

10.1093/jxb/erx018

Genome-wide association study unravels the genetic control of the apple volatilome and its interplay with fruit texture
Cited by: 50
Author(s): Brian Farneti, Mario Di Guardo, Iuliia Khomenko, Luca Cappellin, Franco Biasioli, Riccardo Velasco, Fabrizio Costa
Software Mentions: 6
Published: almost 8 years ago

10.1242/jeb.242168

Limited heat tolerance in a cold-adapted seabird: implications of a warming Arctic
Cited by: 18
Author(s): Emily S. Choy, Ryan S. O’Connor, H. Grant Gilchrist, Anna L. Hargreaves, Oliver P. Love, François Vézina, Kyle H. Elliott
Software Mentions: 6
Published: over 3 years ago

10.1242/jeb.220426

Microclimate buffering and thermal tolerance across elevations in a tropical butterfly
Cited by: 35
Author(s): Gabriela Montejo‐Kovacevich, Simon H. Martin, Joana I. Meier, Caroline Bacquet, Monica Monllor, Chris D. Jiggins, Nicola J. Nadeau
Software Mentions: 6
Published: almost 5 years ago

10.1002/ece3.7271

Can current farmland landscapes feed declining steppe birds? Evaluating arthropod abundance for the endangered little bustard (Tetrax tetrax) in cereal farmland during the chick‐rearing period: Variations between habitats and localities
Cited by: 8
Author(s): David González del Portillo, Beatriz Arroyo, Guillermo García Simón, Manuel B. Morales
Software Mentions: 6
Published: over 3 years ago

10.1002/ece3.3638

Assessing the utility of metabarcoding for diet analyses of the omnivorous wild pig (Sus scrofa)
Cited by: 54
Author(s): Michael S. Robeson, Kamil Khanipov, George Golovko, Samantha M. Wisely, Michael D. White, Michael J. Bodenchuck, Timothy J. Smyser, Yuriy Fofanov, Noah Fierer, Antoinette J. Piaggio
Software Mentions: 6
Published: about 7 years ago

10.1002/ece3.7450

Influence of landscape condition on relative abundance and body condition of two generalist freshwater turtle species
Cited by: 5
Author(s): Joel L. Mota, Donald J. Brown, Danielle M. Canning, Sara M. Crayton, Darien N. Lozon, Alissa L. Gulette, James T. Anderson, Ivana Mali, Brian E. Dickerson, Michael R. J. Forstner, Mark Watson, Thomas K. Pauley
Software Mentions: 6
Published: over 3 years ago

10.7554/eLife.60083

Arrayed CRISPRi and quantitative imaging describe the morphotypic landscape of essential mycobacterial genes
Cited by: 38
Author(s): Timothy J. de Wet, Kirstin Winkler, Musa M. Mhlanga, Valerie Mizrahi, Digby F. Warner
Software Mentions: 6
Published: about 4 years ago

10.1002/ece3.6400

Drought mildly reduces plant dominance in a temperate prairie ecosystem across years
Cited by: 6
Author(s): Karen Castillioni, Kevin R. Wilcox, Lifen Jiang, Yiqi Luo, Chang Gyo Jung, Lara Souza
Software Mentions: 6
Published: over 4 years ago

10.7554/eLife.07597

GLO-Roots: an imaging platform enabling multidimensional characterization of soil-grown root systems
Cited by: 184
Author(s): Rubén Rellán‐Álvarez, Guillaume Lobet, Heike Lindner, Pierre-Luc Pradier, José Sebastián, Muh-Ching Yee, Yu Geng, Charlotte Trontin, Therese LaRue, Amanda Schrager‐Lavelle, Cara H. Haney, Rita Nieu, Julin Maloof, John P. Vogel, José R. Dinneny
Software Mentions: 6
Published: over 9 years ago

10.1002/ece3.7861

Effects of ecological environment and host genotype on the phyllosphere bacterial communities of cigar tobacco (Nicotiana tabacum L.)
Cited by: 9
Author(s): Lei Xing, Jianlei Yang, Yuping Jia, Xiaobing Hu, Yi Liu, Heng Xu, Huaqun Yin, Juan Li, Zhenxie Yi
Software Mentions: 6
Published: over 3 years ago

10.1002/ece3.5819

Evolution of sexually dimorphic pheromone profiles coincides with increased number of male‐specific chemosensory organs in Drosophila prolongata
Cited by: 12
Author(s): Yige Luo, Yunwei Zhang, Jean‐Pierre Farine, Jean‐François Ferveur, Santiago R. Ramírez, Artyom Kopp
Software Mentions: 6
Published: about 5 years ago

10.1002/ece3.3597

Gut microbiota composition is associated with environmental landscape in honey bees
Cited by: 94
Author(s): Julia C. Jones, Carmelo Fruciano, Falk Hildebrand, Hasan Al Toufalilia, Nicholas J. Balfour, Peer Bork, Philipp Engel, Francis L. W. Ratnieks, William O. Hughes
Software Mentions: 6
Published: almost 7 years ago

10.1186/s12967-020-02616-1

Immune landscape of periodontitis unveils alterations of infiltrating immunocytes and molecular networks-aggregating into an interactive web-tool for periodontitis related immune analysis and visualization
Cited by: 7
Author(s): Xiaoqi Zhang, Qingxuan Wang, Xinyu Yan, Yue Shan, Xing Lü, Minqi Li, Hu Long, Wenli Lai
Software Mentions: 6
Published: about 4 years ago

10.1007/s10886-020-01148-8

Phloem Metabolites of Prunus Sp. Rather than Infection with Candidatus Phytoplasma Prunorum Influence Feeding Behavior of Cacopsylla pruni Nymphs
Cited by: 9
Author(s): Jannicke Gallinger, Jürgen Gross
Software Mentions: 6
Published: almost 5 years ago

10.3390/foods10050914

Polar Lipids of Commercial Ulva spp. of Different Origins: Profiling and Relevance for Seaweed Valorization
Cited by: 12
Author(s): Ana S. P. Moreira, Elisabete da Costa, Tânia Melo, Diana Lopes, Adriana Pais, Sónia A.O. Santos, Bárbara Pitarma, Madalena Mendes, Maria Helena Abreu, Pi Nyvall Collén, Pedro Domingues, M. Rosário Domingues
Software Mentions: 6
Published: over 3 years ago

10.3389/fnagi.2014.00146

Differential behavioral and physiological effects of anodal transcranial direct current stimulation in healthy adults of younger and older age
Cited by: 64
Author(s): Kirstin Heise, Martina Niehoff, Jan Feldheim, Gianpiero Liuzzi, Christian Gerloff, Friedhelm C. Hummel
Software Mentions: 6
Published: over 10 years ago

10.1186/s41065-020-00169-3

Identification of differentially expressed genes, signaling pathways and immune infiltration in rheumatoid arthritis by integrated bioinformatics analysis
Cited by: 8
Author(s): Yanzhi Ge, Li Zhou, Zuxiang Chen, Yingying Mao, Ting Li, Peijian Tong
Software Mentions: 6
Published: almost 4 years ago

10.1097/HS9.0000000000000371

Longitudinal Cytokine Profiling Identifies GRO-α and EGF as Potential Biomarkers of Disease Progression in Essential Thrombocythemia
Cited by: 33
Author(s): Nina Friesgaard Øbro, Jacob Grinfeld, Miriam Belmonte, Melissa Irvine, Mairi Shepherd, Tata Nageswara Rao, Axel Karow, Lisa M Riedel, Oliva B Harris, E. Joanna Baxter, Jyoti Nangalia, Anna L. Godfrey, Claire Harrison, Juan Li, Radek C. Skoda, Peter J. Campbell, Andrew Green, David G. Kent
Software Mentions: 6
Published: over 4 years ago

10.3389/fnbeh.2019.00175

Maternal Pregnancy-Related Anxiety Is Associated With Sexually Dimorphic Alterations in Amygdala Volume in 4-Year-Old Children
Cited by: 44
Author(s): Henriette Acosta, Jetro J. Tuulari, Noora M. Scheinin, Niloofar Hashempour, Olli Rajasilta, Tuomas I. Lavonius, Juho Pelto, Virva Saunavaara, Riitta Parkkola, Tuire Lähdesmäki, Lena Karlsson, Hasse Karlsson
Software Mentions: 6
Published: over 5 years ago

10.1186/s12954-019-0289-3

Prevalence of injecting drug use in Estonia 2010–2015: a capture-recapture study
Cited by: 6
Author(s): Mait Raag, Sigrid Vorobjov, Anneli Uusküla
Software Mentions: 6
Published: over 5 years ago

10.3389/fnbeh.2020.581296

A Probiotic Mixture Induces Anxiolytic- and Antidepressive-Like Effects in Fischer and Maternally Deprived Long Evans Rats
Cited by: 6
Author(s): Valérie Daugé, Catherine Philippe, Mahendra Mariadassou, Olivier Rué, Jean‐Charles Martin, Marie Rossignol, Nathalie Dourmap, Ljubica Svilar, Franck Tourniaire, Magali Monnoye, Déborah Jardet, Marie Bangratz, Sophie Holowacz, Sylvie Rabot, Laurent Naudon
Software Mentions: 6
Published: about 4 years ago

10.1186/s12903-021-01832-5

The effects of removing dead bacteria by propidium monoazide on the profile of salivary microbiome
Cited by: 5
Author(s): Qidi Ren, Fangqiao Wei, Chao Yuan, Ce Zhu, Qian Zhang, Junkang Quan, Xiangyu Sun, Shuguo Zheng
Software Mentions: 6
Published: about 3 years ago

10.1080/19490976.2021.1900995

Expansion and persistence of antibiotic-specific resistance genes following antibiotic treatment
Cited by: 21
Author(s): Kang Kang, Lejla Imamovic, Maria-Anna Misiakou, Maria Bornakke Sørensen, Yoshitaro Heshiki, Yueqiong Ni, Tingting Zheng, Jun Li, Mostafa Mostafa Hashim Ellabaan, Marta Colomer-Lluch, Anne A Rode, Peter Bytzer, Gianni Panagiotou, Morten Otto Alexander Sommer
Software Mentions: 6
Published: almost 4 years ago

10.1080/19490976.2020.1814120

Analysis of 16S rRNA genes reveals reduced Fusobacterial community diversity when translocating from saliva to GI sites
Cited by: 10
Author(s): Miles Richardson, Ji‐Chang Ren, Mara Roxana Rubinstein, Jamila A Taylor, Richard A. Friedman, Bo Shen, Yiping W. Han
Software Mentions: 6
Published: about 4 years ago

10.1080/16549716.2019.1623609

The association between cold extremes and neonatal mortality in Swedish Sápmi from 1800 to 1895
Cited by: 7
Author(s): Lena Karlsson, Erling Häggström Lundevaller, Barbara Schumann
Software Mentions: 6
Published: almost 6 years ago

10.3389/fbioe.2018.00200

Harvest of the Oleaginous Microalgae Scenedesmus obtusiusculus by Flocculation From Culture Based on Natural Water Sources
Cited by: 17
Author(s): Felix Bracharz, Daniel Helmdach, Isabel Aschenbrenner, Nils Funck, Daniel Wibberg, Anderson M. Winkler, Frank Bohnen, Jörn Kalinowski, Norbert Mehlmer, Thomas Brück
Software Mentions: 6
Published: almost 6 years ago

10.1093/gigascience/giab003

long-read-tools.org: an interactive catalogue of analysis methods for long-read sequencing data
Cited by: 25
Author(s): Shanika L. Amarasinghe, Matthew E. Ritchie, Quentin Gouil
Software Mentions: 6
Published: almost 4 years ago

10.3389/fcell.2021.638374

Single-Cell Analysis Reveals Spatial Heterogeneity of Immune Cells in Lung Adenocarcinoma
Cited by: 9
Author(s): Youyu Wang, Xiaohua Li, Peng Shu, Honglin Hu, Yuntao Wang, Mengqi Shao, Gang Feng, Yu Liu, Yifeng Bai
Software Mentions: 6
Published: over 3 years ago

10.1093/gigascience/giz050

Metabolic responses of rice cultivars with different tolerance to combined drought and heat stress under field conditions
Cited by: 48
Author(s): Lovely Mae F Lawas, Xia Li, Alexander Erban, Joachim Kopka, S. V. Krishna Jagadish, Ellen Zuther, Dirk K. Hincha
Software Mentions: 6
Published: over 5 years ago

10.3389/fimmu.2021.726747

Identifying Immune Cell Infiltration and Effective Diagnostic Biomarkers in Rheumatoid Arthritis by Bioinformatics Analysis
Cited by: 45
Author(s): Sheng Zhou, Hongmei Lü, Min Xiong
Software Mentions: 6
Published: over 3 years ago

10.3389/fimmu.2021.632667

PD-1 Blockade Modulates Functional Activities of Exhausted-Like T Cell in Patients With Cutaneous Leishmaniasis
Cited by: 16
Author(s): Renan Garcia de Moura, Luciana Polaco Covre, Carlos Henrique Fantecelle, Vitor Alejandro Torres Gajardo, Carla Baroni Cunha, Lorenzzo Lyrio Stringari, Ashton T. Belew, Camila Batista Daniel, Sandra Ventorin von Zeidler, Carlos E. Tadokoro, Herbert Leonel de Matos Guedes, Raphael Lubiana Zanotti, David M. Mosser, Aloísio Falqueto, Arne N. Akbar, Daniel Cláudio Oliveira Gomes
Software Mentions: 6
Published: over 3 years ago

10.3390/metabo11040236

Metabolite Profile of Treatment-Naive Metabolic Syndrome Subjects in Relation to Cardiovascular Disease Risk
Cited by: 5
Author(s): Moritz V. Warmbrunn, Annefleur M. Koopen, Nicolien C. de Clercq, Pieter F. de Groot, Ruud S. Kootte, Kristien E. Bouter, Kasper W. ter Horst, Annick V. Hartstra, Mireille J. Serlie, Mariëtte T. Ackermans, Maarten R. Soeters, Daniël H. van Raalte, Mark Davids, Max Nieuwdorp, Albert K. Groen
Software Mentions: 6
Published: over 3 years ago

10.3390/metabo11050269

Influence of Extraction Solvent on Nontargeted Metabolomics Analysis of Enrichment Reactor Cultures Performing Enhanced Biological Phosphorus Removal (EBPR)
Cited by: 4
Author(s): Nay Min Min Thaw Saw, Pipob Suwanchaikasem, Rogelio Zuniga-Montanez, Guanglei Qiu, Ezequiel M. Marzinelli, Stefan Wuertz, Rohan B.H. Williams
Software Mentions: 6
Published: over 3 years ago

10.1186/s41118-017-0018-2

Decomposition of regional convergence in population aging across Europe
Cited by: 16
Author(s): Ilya Kashnitsky, Joop de Beer, Leo van Wissen
Software Mentions: 6
Published: over 7 years ago

10.3389/fimmu.2021.688493

Cohesin Core Complex Gene Dosage Contributes to Germinal Center Derived Lymphoma Phenotypes and Outcomes
Cited by: 4
Author(s): Martín A. Rivas, Ceyda Durmaz, Andreas Kloetgen, Cristopher R Chin, Zhengming Chen, Bhavneet Bhinder, Amnon Koren, Aaron D. Viny, Christopher D. Scharer, Jeremy M. Boss, Olivier Elemento, Christopher E. Mason, Ari Melnick
Software Mentions: 6
Published: about 3 years ago

10.3389/fimmu.2020.583644

Fusobacterium nucleatum Extracellular Vesicles Modulate Gut Epithelial Cell Innate Immunity via FomA and TLR2
Cited by: 27
Author(s): Camille Martin-Gallausiaux, Antoine Malabirade, Janine Habier, Paul Wilmes
Software Mentions: 6
Published: almost 4 years ago

10.3389/fimmu.2021.707830

In-Depth Profiling of T-Cell Responsiveness to Commonly Recognized CMV Antigens in Older People Reveals Important Sex Differences
Cited by: 6
Author(s): Bernhard Reus, Stefano Caserta, Martin Larsen, George W. Morrow, Aalia Bano, Michael Hallensleben, Chakravarthi Rajkumar, Alejandra Pera, Florian Kern
Software Mentions: 6
Published: over 3 years ago

10.1186/s12967-020-02689-y

Three hematologic/immune system-specific expressed genes are considered as the potential biomarkers for the diagnosis of early rheumatoid arthritis through bioinformatics analysis
Cited by: 60
Author(s): Qi Cheng, Xin Chen, Huaxiang Wu, Yan Du
Software Mentions: 6
Published: almost 4 years ago

10.1186/s13073-020-00825-3

Mode and dynamics of vanA-type vancomycin resistance dissemination in Dutch hospitals
Cited by: 15
Author(s): Sergio Arredondo-Alonso, Janetta Top, Jukka Corander, Rob J. L. Willems, Anita C. Schürch
Software Mentions: 6
Published: almost 4 years ago

10.1186/s13073-019-0647-5

Prognostic value of B cells in cutaneous melanoma
Cited by: 73
Author(s): Sara R. Selitsky, Lisle E. Mose, Christof C. Smith, Shengjie Chai, Katherine A. Hoadley, Dirk P. Dittmer, Stergios J. Moschos, Joel S. Parker, Benjamin G. Vincent
Software Mentions: 6
Published: over 5 years ago

10.3389/fimmu.2021.724015

Transcriptional, Epigenetic, and Functional Reprogramming of Monocytes From Non-Human Primates Following Chronic Alcohol Drinking
Cited by: 11
Author(s): Sloan A. Lewis, Suhas Sureshchandra, Brianna Doratt, Vanessa Jiménez, Cara Stull, Kathleen A. Grant, Ilhem Messaoudi
Software Mentions: 6
Published: over 3 years ago

10.1186/s13073-019-0644-8

Clinical utility of custom-designed NGS panel testing in pediatric tumors
Cited by: 77
Author(s): Lea F. Surrey, Suzanne P. MacFarland, Fengqi Chang, Ke Cao, Komal S. Rathi, Gozde Akgumus, Daniel Gallo, Fumin Lin, Adam Gleason, Pichai Raman, Richard Aplenc, Rochelle Bagatell, Jane E. Minturn, Yaël P. Mossé, Mariarita Santi, Sarah K. Tasian, Angela J. Waanders, Mahdi Sarmady, John M. Maris, Stephen P. Hunger, Marilyn M. Li
Software Mentions: 6
Published: over 5 years ago

10.7554/eLife.61909

Real-time, low-latency closed-loop feedback using markerless posture tracking
Cited by: 78
Author(s): Gary A Kane, Gonçalo Lopes, Jonny L. Saunders, Alexander Mathis
Software Mentions: 6
Published: almost 4 years ago

10.3389/fimmu.2021.632798

Comprehensive Transcriptomic Analysis Identifies Novel Antiviral Factors Against Influenza A Virus Infection
Cited by: 11
Author(s): Ao Zhou, Dong Xia, Mengyun Liu, Bin Tang
Software Mentions: 6
Published: over 3 years ago

10.3389/fimmu.2021.676173

Interleukin-17A Causes Osteoarthritis-Like Transcriptional Changes in Human Osteoarthritis-Derived Chondrocytes and Synovial Fibroblasts In Vitro
Cited by: 20
Author(s): Jolet Y Mimpen, Mathew Baldwin, Adam P. Cribbs, Martin Philpott, Andrew Carr, Stephanie G. Dakin, Sarah Snelling
Software Mentions: 6
Published: over 3 years ago

10.7554/eLife.22057

T cell receptor repertoires of mice and humans are clustered in similarity networks around conserved public CDR3 sequences
Cited by: 121
Author(s): Asaf Madi, Asaf Poran, Eric Shifrut, Shlomit Reich-Zeliger, Erez Greenstein, Irena Zaretsky, Tomer Arnon, François Van Laethem, Alfred Singer, Jinghua Lu, Peter D. Sun, Irun R. Cohen, Nir Friedman
Software Mentions: 6
Published: over 7 years ago

10.3389/fmed.2021.587496

Potential Prognostic Immune Biomarkers of Overall Survival in Ovarian Cancer Through Comprehensive Bioinformatics Analysis: A Novel Artificial Intelligence Survival Prediction System
Cited by: 4
Author(s): Tingshan He, Liwen Huang, Jing Li, Peng Wang, Zhiqiao Zhang
Software Mentions: 6
Published: over 3 years ago

10.3389/fmicb.2017.02102

Functionality of Root-Associated Bacteria along a Salt Marsh Primary Succession
Cited by: 17
Author(s): Miao Wang, Erqin Li, Chen Liu, Alexandre Jousset, Joana Falcão Salles
Software Mentions: 6
Published: about 7 years ago

10.3389/fmicb.2020.588778

Labile Dissolved Organic Matter Compound Characteristics Select for Divergence in Marine Bacterial Activity and Transcription
Cited by: 21
Author(s): Benjamin Pontiller, Sandra Martínez‐García, Daniel Lundin, Jarone Pinhassi
Software Mentions: 6
Published: about 4 years ago

10.3389/fmicb.2018.02868

Comparison of Bacterial Diversity in Air and Water of a Major Urban Center
Cited by: 24
Author(s): M. Elias Dueker, Shaya Regina French, Gregory D. O’Mullan
Software Mentions: 6
Published: almost 6 years ago

Projects: cran: ggplot2

Papers Mentioning ggplot2 11,441