Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1017/S0031182021000111

https://doi.org/10.1017/S0031182021000111

Dual RNA-Seq transcriptome analysis of chicken macrophage-like cells (HD11) infected <i>in vitro</i> with <i>Eimeria tenella</i>

Cited by: 5
Author(s): Arnar K. S. Sandholt, Feifei Xu, Robert Söderlund, Anna Lundén, Karin Troell, Staffan G. Svärd, Eva Wattrang
Published: almost 4 years ago

Software Mentions 6

bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: EnhancedVolcano
Publication-ready volcano plots with enhanced colouring and labeling
Papers that mentioned: 123
cran: ClassDiscovery
Classes and Methods for "Class Discovery" with Microarrays or Proteomics
Papers that mentioned: 13
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: RColorBrewer
ColorBrewer Palettes
Papers that mentioned: 490
pypi: HTSeq
A framework to process and analyze data from high-throughput sequencing (HTS) assays
Papers that mentioned: 3,071