10.3390/brainsci11020231

Infant Eye Gaze While Viewing Dynamic Faces
Cited by: 5
Author(s): Lisa M. Oakes, Michaela C. DeBolt, Aaron G. Beckner, Annika T. Voss, Lisa Cantrell
Software Mentions: 7
Published: over 5 years ago

10.3389/fmicb.2018.01620

Rhizosphere Bacterial Communities Differ According to Fertilizer Regimes and Cabbage (Brassica oleracea var. capitata L.) Harvest Time, but Not Aphid Herbivory
Cited by: 26
Author(s): Flora Jane Mary O'Brien, Marc G. Dumont, Jeremy S. Webb, Guy M. Poppy
Software Mentions: 7
Published: almost 8 years ago

10.3389/fmicb.2020.560336

Functional Gene Expression in Shark Bay Hypersaline Microbial Mats: Adaptive Responses
Cited by: 15
Author(s): Matthew A. Campbell, Kliti Grice, Pieter T. Visscher, Therese Morris, Hon Lun Wong, Richard Allen White, Brendan P. Burns, Marco J. L. Coolen
Software Mentions: 7
Published: over 5 years ago

10.3390/e22101071

Assessing Granger-Causality in the Southern Humboldt Current Ecosystem Using Cross-Spectral Methods
Cited by: 8
Author(s): Javier E. Contreras-Reyes, Carola Hernández‐Santoro
Software Mentions: 7
Published: almost 6 years ago

10.1038/sdata.2018.148

Geographically-stratified HIV-1 group M pol subtype and circulating recombinant form sequences
Cited by: 5
Author(s): Soo-Yon Rhee, Robert W. Shafer
Software Mentions: 7
Published: almost 8 years ago

10.1128/mSystems.00066-18

Microbial Community Cohesion Mediates Community Turnover in Unperturbed Aquifers
Cited by: 53
Author(s): Robert Danczak, Michael D. Johnston, Chris Kenah, Michael T. Slattery, Michael J. Wilkins
Software Mentions: 7
Published: almost 8 years ago

10.1371/journal.pone.0130629

A Geographic Mosaic of Climate Change Impacts on Terrestrial Vegetation: Which Areas Are Most at Risk?
Cited by: 37
Author(s): David D. Ackerly, William K. Cornwell, S. B. Weiss, Lorraine E. Flint, Alan L. Flint
Software Mentions: 7
Published: about 11 years ago

10.1038/s41598-020-67221-0

Diversity hotspot and unique community structure of foraminifera in the world’s deepest marine blue hole – Sansha Yongle Blue Hole
Cited by: 13
Author(s): Qingxia Li, Yanli Lei, Raphaёl Morard, Tiegang Li, Baodong Wang
Software Mentions: 7
Published: about 6 years ago

10.3389/fmed.2021.670694

Investigation of Coagulation Biomarkers to Assess Clinical Deterioration in SARS-CoV-2 Infection
Cited by: 15
Author(s): Paul Billoir, Kévin Alexandre, Thomas Duflot, Maxime Roger, S. Miranda, Odile Goria, Luc Marie Joly, Mathieu Demeyere, Guillaume Feugray, Valéry Brunel, Manuel Etienne, Véronique Le Cam Duchez
Software Mentions: 7
Published: about 5 years ago

10.1371/journal.pone.0094246

Winemaking and Bioprocesses Strongly Shaped the Genetic Diversity of the Ubiquitous Yeast Torulaspora delbrueckii
Cited by: 60
Author(s): Warren Albertin, Laura Chasseriaud, Guillaume Comte, Aurélie Panfili, Adline Delcamp, Franck Salin, Philippe Marullo, Marina Bely
Software Mentions: 7
Published: about 12 years ago

10.1515/tnsci-2021-0002

<i>IKBIP</i> is a novel EMT-related biomarker and predicts poor survival in glioma
Cited by: 9
Author(s): Ying Yang, Jin Wang, Shi‐Hai Xu, Wen Lv, Fei Shi, Aijun Shan
Software Mentions: 7
Published: over 5 years ago

10.1038/s41598-017-03503-4

Fuel loads acquired at a stopover site influence the pace of intercontinental migration in a boreal songbird
Cited by: 80
Author(s): Camila Gómez, Nicholas J. Bayly, D. Ryan Norris, Stuart A. Mackenzie, Kenneth V. Rosenberg, Philip D. Taylor, Keith A. Hobson, Carlos Daniel Cadena
Software Mentions: 7
Published: about 9 years ago

10.1371/journal.pone.0152578

Role of Cattle Movements in Bovine Tuberculosis Spread in France between 2005 and 2014
Cited by: 44
Author(s): Aurore Palisson, Aurélie Courcoul, Benoı̂t Durand
Software Mentions: 7
Published: over 10 years ago

10.7554/eLife.34031

Forniceal deep brain stimulation induces gene expression and splicing changes that promote neurogenesis and plasticity
Cited by: 39
Author(s): Amy E. Pohodich, Hari Krishna Yalamanchili, Ayush T. Raman, Ying-Wooi Wan, Michael C. Gundry, Shuang Hao, Haijing Jin, Jianrong Tang, Zhandong Liu, Huda Y. Zoghbi
Software Mentions: 7
Published: over 8 years ago

10.3390/microorganisms7090349

Site-Specific Microbial Decomposer Communities Do Not Imply Faster Decomposition: Results from a Litter Transplantation Experiment
Cited by: 16
Author(s): Aïda Bani, Luigimaria Borruso, Kirsty J. Matthews Nicholass, Tommaso Bardelli, Andrea Polo, Silvia Pioli, María Gómez-Brandòn, Heribert Insam, Alex J. Dumbrell, Lorenzo Brusetti
Software Mentions: 7
Published: almost 7 years ago

10.1038/s41598-020-79898-4

Physical distancing and risk of COVID-19 in small-scale fisheries: a remote sensing assessment in coastal Ghana
Cited by: 43
Author(s): Isaac Okyere, Ernest Obeng Chuku, Bernard Ekumah, Donatus Bapentire Angnuureng, Justice K. Boakye-Appiah, David J. Mills, Raymond Babanawo, Noble Kwame Asare, Denis Worlanyo Aheto, Brian Crawford
Software Mentions: 7
Published: over 5 years ago

10.1186/s12862-021-01821-w

Phylogenetic history influences convergence for a specialized ecology: comparative skull morphology of African burrowing skinks (Squamata; Scincidae)
Cited by: 7
Author(s): Natasha Stepanova, Aaron M. Bauer
Software Mentions: 7
Published: about 5 years ago

10.3389/fninf.2014.00023

CyNEST: a maintainable Cython-based interface for the NEST simulator
Cited by: 22
Author(s): Yury V. Zaytsev, Abigail Morrison
Software Mentions: 7
Published: over 12 years ago

10.1186/1471-2164-15-178

seqCNA: an R package for DNA copy number analysis in cancer using high-throughput sequencing
Cited by: 12
Author(s): David Mósen-Ansorena, Naiara Tellería, Silvia Veganzones, Virginia de la Orden, M.L. Maestro, Ana M. Aransay
Software Mentions: 7
Published: over 12 years ago

10.3390/ani10020242

Applicability of an Unmedicated Feeding Program Aimed to Reduce the Use of Antimicrobials in Nursery Piglets: Impact on Performance and Fecal Microbiota
Cited by: 2
Author(s): Paola López-Colom, Jordi Estellé, Jordi Bonet, Julià Coma, S. M. Martín‐Orúe
Software Mentions: 7
Published: over 6 years ago

10.1371/journal.pone.0235779

Prostate MRI added to CAPRA, MSKCC and Partin cancer nomograms significantly enhances the prediction of adverse findings and biochemical recurrence after radical prostatectomy
Cited by: 7
Author(s): Kevin Sandeman, Juho Eineluoto, Joona Pohjonen, Andrew Erickson, Tuomas P. Kilpeläinen, Petrus Järvinen, Henrikki Santti, Anssi Pétas, Mika Matikainen, Suvi Marjasuo, Anu Kenttämies, Tuomas Mirtti, Antti Rannikko
Software Mentions: 7
Published: almost 6 years ago

10.1098/rsif.2018.0084

Understanding the ontogeny of foraging behaviour: insights from combining marine predator bio-logging with satellite-derived oceanography in hidden Markov models
Cited by: 72
Author(s): W. James Grecian, Jude V. Lane, Théo Michelot, Helen M. Wade, Keith C. Hamer
Software Mentions: 7
Published: about 8 years ago

10.1371/journal.pone.0173115

Altered regulation and expression of genes by BET family of proteins in COPD patients
Cited by: 11
Author(s): Rajneesh Malhotra, Nisha Kurian, Xin Zhou, Fang Jiang, Susan J. Monkley, Amy DeMicco, Ib Groth Clausen, Göran Dellgren, Goran Edenro, Miika J. Ahdesmäki, Maryam Clausen, Lisa Öberg, Elisabeth Israelsson, Graham Belfield, Outi Vaarala
Software Mentions: 7
Published: over 9 years ago

10.1038/s41598-019-48214-0

Year-round individual specialization in the feeding ecology of a long-lived seabird
Cited by: 10
Author(s): Laura Zango, José Manuel Reyes‐González, Teresa Militão, Zuzana Zajková, Eduardo Álvarez-Alonso, Raül Ramos, Jacob González‐Solís
Software Mentions: 7
Published: almost 7 years ago

10.3390/cancers12061453

DSCAM-AS1-Driven Proliferation of Breast Cancer Cells Involves Regulation of Alternative Exon Splicing and 3′-End Usage
Cited by: 16
Author(s): Jamal Elhasnaoui, Valentina Miano, Giulio Ferrero, Elena Doria, Antonette E. Leon, Aline S C Fabrício, Laura Annaratone, Isabella Castellano, Anna Sapino, Michele De Bortoli
Software Mentions: 7
Published: about 6 years ago

10.1002/ece3.4134

A simple function for full-subsets multiple regression in ecology with R
Cited by: 103
Author(s): Rebecca Fisher, Shaun K. Wilson, Tsai Min Sin, Ai C. Lee, Tim Langlois
Software Mentions: 7
Published: about 8 years ago

10.1186/s12885-020-6565-5

Development and validation of a preoperative nomogram for predicting survival of patients with locally advanced prostate cancer after radical prostatectomy
Cited by: 12
Author(s): Xianghong Zhou, Qingyang Ning, Kun Jin, Tao Zhang, Xuelei Ma
Software Mentions: 7
Published: over 6 years ago

10.1038/s41598-021-88349-7

Landscape resistance constrains hybridization across contact zones in a reproductively and morphologically polymorphic salamander
Cited by: 4
Author(s): Guillermo Velo‐Antón, André Lourenço, Pedro Galán, Alfredo G. Nicieza, Pedro Tarroso
Software Mentions: 7
Published: about 5 years ago

10.7554/eLife.12845

Two FGFRL-Wnt circuits organize the planarian anteroposterior axis
Cited by: 90
Author(s): M. Lucila Scimone, Lauren E. Cote, Travis Rogers, Peter W. Reddien
Software Mentions: 7
Published: about 10 years ago

10.1099/mgen.0.000303

Comparative genomic analysis identifies X-factor (haemin)-independent Haemophilus haemolyticus: a formal re-classification of 'Haemophilus intermedius'
Cited by: 5
Author(s): Tegan M. Harris, Erin P. Price, Derek S. Sarovich, Niels Nørskov‐Lauritsen, Jemima Beissbarth, Anne B. Chang, Heidi Smith‐Vaughan
Software Mentions: 7
Published: over 6 years ago

10.1038/s41598-021-93922-1

Life experience rather than domestication accounts for dogs’ increased oxytocin release during social contact with humans
Cited by: 19
Author(s): Gwendolyn Wirobski, Friederike Range, Franka Simea Schaebs, Rüpert Palme, Tobias Deschner, Sarah Marshall-Pescini
Software Mentions: 7
Published: almost 5 years ago

10.1002/ece3.4402

Moose movement rates are altered by wolf presence in two ecosystems
Cited by: 18
Author(s): Mark A. Ditmer, John Fieberg, Ronald Moen, Steve K. Windels, Seth Stapleton, Tara R. Harris
Software Mentions: 7
Published: almost 8 years ago

10.3390/genes12010123

Satellite DNA in Neotropical Deer Species
Cited by: 6
Author(s): Miluše Vozdová, Svatava Kubı́čková, Natalia Martínková, David Javier Galindo, Agda Maria Bernegossi, Halina Černohorská, Dita Kadlčíková, Petra Musilová, José Maurício Barbanti Duarte, Jiřı́ Rubeš
Software Mentions: 7
Published: over 5 years ago

10.1186/s12859-016-0970-4

MetICA: independent component analysis for high-resolution mass-spectrometry based non-targeted metabolomics
Cited by: 22
Author(s): Youzhong Liu, Kirill S. Smirnov, Marianna Lucio, Régis D. Gougeon, Hervé Alexandre, Philippe Schmitt‐Kopplin
Software Mentions: 7
Published: over 10 years ago

10.3389/fgene.2020.00899

Identification of a Five-Gene Signature for Predicting Survival in Malignant Pleural Mesothelioma Patients
Cited by: 6
Author(s): Yi-Yang Bai, Wang Xiao, Jie Hou, Luying Geng, Xuan Liang, Zhiping Ruan, Hui Guo, Nan Kang, Lili Jiang
Software Mentions: 7
Published: almost 6 years ago

10.1155/2021/6629842

DOCK4 Is a Platinum-Chemosensitive and Prognostic-Related Biomarker in Ovarian Cancer
Cited by: 6
Author(s): Qianqian Zhao, Jie Zhong, Ping Lü, Xiao Feng, Ying Han, Chenqi Ling, Wenxiu Guo, Weijin Zhou, Fudong Yu
Software Mentions: 7
Published: over 5 years ago

10.1534/g3.118.200913

polyRAD: Genotype Calling with Uncertainty from Sequencing Data in Polyploids and Diploids
Cited by: 59
Author(s): Lindsay V. Clark, Alexander E. Lipka, Erik J. Sacks
Software Mentions: 7
Published: over 7 years ago

10.1038/s41598-020-75970-1

The magnitude and extent of edge effects on vascular epiphytes across the Brazilian Atlantic Forest
Cited by: 12
Author(s): Edicson Parra-Sánchez, Cristina Banks-Leite
Software Mentions: 7
Published: over 5 years ago

10.1186/s12938-015-0027-3

Open source software for the analysis of corneal deformation parameters on the images from the Corvis tonometer
Cited by: 10
Author(s): Robert Koprowski
Software Mentions: 7
Published: about 11 years ago

10.1016/j.heliyon.2021.e06160

Genomic evidence supports the introgression between two sympatric stickleback species inhabiting the White Sea basin
Cited by: 4
Author(s): Artem Nedoluzhko, Fedor Sharko, Svetlana Tsygankova, Eugenia Boulygina, Amina S. Ibragimova, Anton Teslyuk, Jorge Galindo-Villegas, С. М. Расторгуев
Software Mentions: 7
Published: over 5 years ago

10.1186/s12920-020-0695-0

Specific chromatin landscapes and transcription factors couple breast cancer subtype with metastatic relapse to lung or brain
Cited by: 20
Author(s): Wesley L. Cai, Celeste B. Greer, Jocelyn F. Chen, Anna Arnal-Estapé, Jian Cao, Qin Yan, Don X. Nguyen
Software Mentions: 7
Published: over 6 years ago

10.1186/s40104-021-00601-2

Supplementation of a lacto-fermented rapeseed-seaweed blend promotes gut microbial- and gut immune-modulation in weaner piglets
Cited by: 13
Author(s): Yan Hui, Paulina Tamez-Hidalgo, Tomasz Cieplak, Gizaw Dabessa Satessa, Witold Kot, Søren Kjærulff, Mette Olaf Nielsen, Dennis Sandris Nielsen, Łukasz Krych
Software Mentions: 7
Published: almost 5 years ago

10.3389/fpls.2018.00029

Population Genetic Structure in Glyphosate-Resistant and -Susceptible Palmer Amaranth (Amaranthus palmeri) Populations Using Genotyping-by-sequencing (GBS)
Cited by: 26
Author(s): Anita Küpper, Harish Manmathan, Darci A. Giacomini, Eric Patterson, William B. McCloskey, Todd A. Gaines
Software Mentions: 7
Published: over 8 years ago

10.1038/s41598-020-78777-2

Evolutionary design of optimal surface topographies for biomaterials
Cited by: 4
Author(s): Aliaksei Vasilevich, Aurélie Carlier, David A. Winkler, Shantanu Singh, Jan de Boer
Software Mentions: 7
Published: over 5 years ago

10.1186/s12864-021-07489-2

Datura genome reveals duplications of psychoactive alkaloid biosynthetic genes and high mutation rate following tissue culture
Cited by: 5
Author(s): Alex Rajewski, Derreck Carter-House, Jason E. Stajich, Amy Litt
Software Mentions: 7
Published: over 5 years ago

10.3389/fpls.2019.01246

Temporal Dynamics of the Sap Microbiome of Grapevine Under High Pierce’s Disease Pressure
Cited by: 43
Author(s): Elizabeth Deyett, Philippe E. Rolshausen
Software Mentions: 7
Published: over 6 years ago

10.1186/s40168-017-0302-6

Influence of the pneumococcal conjugate vaccines on the temporal variation of pneumococcal carriage and the nasal microbiota in healthy infants: a longitudinal analysis of a case–control study
Cited by: 27
Author(s): Moana Mika, Josua Maurer, Insa Korten, Aurélie Allemann, Suzanne Aebi, Silvio D. Brugger, Weihong Qi, Urs Frey, Philipp Latzin, Markus Hilty
Software Mentions: 7
Published: almost 9 years ago

10.3389/fpls.2020.589300

Intrafloral Color Modularity in a Bee-Pollinated Orchid
Cited by: 4
Author(s): João Marcelo Robazzi Bignelli Valente Aguiar, Artur A. Maciel, Pamela Cristina Santana, Francismeire Jane Telles, Pedro Joaquim Bergamo, Paulo Eugênio Oliveira, Vinícius Lourenço Garcia de Brito
Software Mentions: 7
Published: over 5 years ago

10.1038/s41598-018-19607-4

Maize chlorotic mottle virus exhibits low divergence between differentiated regional sub-populations
Cited by: 26
Author(s): Luke Braidwood, Diego F. Quito-Avila, Darlene Cabanas, Alberto Bressan, Anne Wangai, David C. Baulcombe
Software Mentions: 7
Published: over 8 years ago

10.1038/s41598-017-14366-0

Erythropoietin Signaling Regulates Key Epigenetic and Transcription Networks in Fetal Neural Progenitor Cells
Cited by: 10
Author(s): Christina Sollinger, Jacquelyn Lillis, Jeffrey Malik, Michael Getman, Christoph Pröschel, Laurie A. Steiner
Software Mentions: 7
Published: over 8 years ago

10.1002/mc.23147

Loss of myeloid‐specific lamin A/C drives lung metastasis through Gfi‐1 and C/EBPε‐mediated granulocytic differentiation
Cited by: 3
Author(s): Hiroki Ishii, Woo‐Yong Park, Jae-Young So, Skyler Kuhn, Vishal N. Kopardé, Yanli Pang, Tim F. Greten, M. Christine Hollander, Li Yang
Software Mentions: 7
Published: over 6 years ago

10.3389/fpls.2019.01481

Understanding the Genetic Basis of Spike Fertility to Improve Grain Number, Harvest Index, and Grain Yield in Wheat Under High Temperature Stress Environments
Cited by: 33
Author(s): Sumit Pradhan, Ali Babar, Kelly R. Robbins, Guihua Bai, Richard E. Mason, Jahangir Khan, Dipendra Shahi, Muhsin Avci, Jia Guo, Mohammad Maksud Hossain, Madhav Bhatta, Maryati Mohamed, Senthold Asseng, Paul St. Amand, Salvador A. Gezan, Byung‐Kee Baik, Ann R. Blount, Amy Bernardo
Software Mentions: 7
Published: over 6 years ago

10.1042/BSR20203336

Comprehensive analysis of tumor mutation burden and immune microenvironment in gastric cancer
Cited by: 17
Author(s): Jie Yu, QianYun Zhang, Mengchuan Wang, Shi-Dong Liang, Hongyun Huang, Lang Xie, Chunhui Cui
Software Mentions: 7
Published: over 5 years ago

10.3390/plants10050998

Sources of Resistance to Common Bacterial Blight and Charcoal Rot Disease for the Production of Mesoamerican Common Beans in the Southern United States
Cited by: 5
Author(s): Daniel Ambachew, Jacqueline Joshua, Margaret T. Mmbaga, Matthew W. Blair
Software Mentions: 7
Published: about 5 years ago

10.1186/s12868-016-0283-6

25th Annual Computational Neuroscience Meeting: CNS-2016
Cited by: 71
Author(s): Tatyana O. Sharpee, Alain Destexhe, Mitsuo Kawato, Vladislav Sekulić, Frances K. Skinner, Daniel K. Wójcik, Chaitanya Chintaluri, Dorottya Cserpán, Zoltán Somogyvári, Jae Kyoung Kim, Zachary P. Kilpatrick, Matthew R. Bennett, Krešimir Josić, Irene Elices, David Arroyo, Rafael Levi, Francisco B. Rodríguez, Pablo Varona, Eunjin Hwang, Bowon Kim, Hio-Been Han, Tae Il Kim, James T Mckenna, Ritchie E. Brown, Robert W. McCarley, Jee Hyun Choi, James Rankin, Pamela Osborn Popp, John Rinzel, Alejandro Tabas, André Rupp, Emili Balaguer‐Ballester, Matias I. Maturana, David B. Grayden, Shaun L. Cloherty, Tatiana Kameneva, M. Ibbotson, Hamish Meffin, Veronika Koren, Timm Lochmann, Valentin Dragoi, Klaus Obermayer, Maria Psarrou, Maria J. Schilstra, Neil Davey, Benjamin Torben‐Nielsen, Volker Steuber, Huiwen Ju, Junsheng Yu, Michael L. Hines, Liang Chen, Yuguo Yu, Jimin Kim, Will Leahy, Eli Shlizerman, Justas Birgiolas, Richard C. Gerkin, Atthaphon Viriyopase, Raoul-Martin Memmesheimer, Stan Gielen, Yuri Dabaghian, Justin DeVito, Luca Perotti, Anmo J. Kim, Lisa M. Fenk, Cheng Cheng, Gaby Maimon, Chang Zhao, Yves F. Widmer, Simon G. Sprecher, Walter Senn, Geir Halnes, Tuomo Mäki‐Marttunen, Daniel Keller, Klas H. Pettersen, Ole A. Andreassen, Gaute T. Einevoll, Yasunori Yamada, Moira L. Steyn-Ross, D. Alistair Steyn-Ross, Jorge F. Mejías, John D. Murray, Henry Kennedy, Xiaojing Wang, Alexandra Kruscha, Jan Grewe, Jan Benda, Benjamin Lindner, Laurent Badel, Kazumi Ohta, Yoshiko Tsuchimoto, Hokto Kazama, B. Kahng, Nicoladie D. Tam, Luca Pollonini, George Zouridakis, Jaehyun Soh, DaeEun Kim, Minsu Yoo, Stéphanie Palmer, Viviana Culmone, Ingo Bojak, Andrea Ferrario, Robert Merrison-Hort, Roman Borisyuk, Chang Sub Kim, T. Tezuka, Pangyu Joo, Young-Ah Rho, Shawn D. Burton, G. Bard Ermentrout, Jaeseung Jeong, Nathaniel N. Urban, Petr Maršálek, Hoon-Hee Kim, Seok-hyun Moon, Dowon Lee, Sung-beom Lee, Ji-yong Lee, Yaroslav I. Molkov, Khaldoun C. Hamade, Wondimu Teka, William Barnett, Taegyo Kim, Sergey N. Markin, Ilya A. Rybak, Csaba Forró, Harald Dermutz, László Demkó, János Vörös, Andrey Babichev, Haiping Huang, Sergio Verduzco-Flores, Filipa Santos, Péter András, Christoph Metzner, Achim Schweikard, Bartosz Zurowski, James P. Roach, Leonard M. Sander, Michał Żochowski, Quinton M. Skilling, Nicolette Ognjanovski, Sara J. Aton, Shengjun Wang, Guang Ouyang, Jing Guang, Mingsha Zhang, K. Y. Michael Wong, Changsong Zhou, P. A. Robinson, Paula Sanz‐Leon, P.M. Drysdale, Felix Fung, Romesh Abeysuriya, Chris Rennie, Xuelong Zhao, Yoonsuck Choe, Huei-Fang Yang, Yuanyuan Mi, Xinhua Lin, Si Wu, Joscha Liedtke, Manuel Schottdorf, Fred Wolf, Yuichi Yamamura, Jeffery R. Wickens, Timothy Rumbell, Julia Ramsey, Amy Reyes, Danel Draguljić, Patrick R. Hof, Jennifer I. Luebke, Christina M. Weaver, Hu He, Yang Xu, Hailin Ma, Zhiheng Xu, Yuzhe Wang, Kwangyeol Baek, Laurel Morris, Prantik Kundu, Valerie Voon, Everton J. Agnes, Tim P. Vogels, William F Podlaski, Martin A. Giese, Pradeep Kuravi, Rufin Vogels, Alexander Seeholzer, Rajnish Ranjan, Tim P. Vogels, Joaquín J. Torres, Fabiano Baroni, Roberto Latorre, Bart Gips, Eric Lowet, Mark Roberts, Peter De Weerd, Ole Jensen, Jan van der Eerden, Abdorreza Goodarzinick, M. D. Niry, Alireza Valizadeh, Aref Pariz, Shervin S. Parsi, Julia M. Warburton, Lucia Marucci, Francesco Tamagnini, Jon Brown, Krasimira Tsaneva-Atanasova, Florence I. Kleberg, Jochen Triesch, Bahar Moezzi, Nicolangelo Iannella, Natalie Schaworonkow, Lukas Plogmacher, Mitchell R. Goldsworthy, Brenton Hordacre, Mark D. McDonnell, Michael C. Ridding, Martin Zapotocky, Daniel Šmít, Isabelle Dusart, Alain Trembleau, Sakyasingha Dasgupta, Isao Nishikawa, Kazuyuki Aihara, Taro Toyoizumi, Daniel Robb, Nick Mellen, Natalia Toporikova, Rongxiang Tang, Yi‐Yuan Tang, Guangsheng Liang, Seth Kiser, James H. Howard, Julia Goncharenko, Sergej O. Voronenko, Tosif Ahamed, Greg Stephens, Pierre Yger, Baptiste Lefebvre, Giulia Lia Beatrice Spampinato, Elric Esposito, Marcel Stimberg et Olivier Marre, Hansol Choi, Min‐Ho Song, SueYeon Chung, Dan D. Lee, Haim Sompolinsky, Ryan S. Phillips, Jeffrey C. Smith, Alexandra P. Chatzikalymniou, Katie Ferguson, N. Alex Cayco Gajic, Claudia Clopath, R. Angus Silver, Padraig Gleeson, Bóris Marin, Sadra Sadeh, Adrián Quintana, Matteo Carandini, Salvador Dura‐Bernal, William W. Lytton, Andrew Davison, Luozheng Li, Wenhao Zhang, Dahui Wang, Youngjo Song, Sol Park, Ilhwan Choi, Hee‐Sup Shin, Hannah Choi, Anitha Pasupathy, Eric Shea‐Brown, Dongsung Huh, Terrence J. Sejnowski, Simon Vogt, Arvind Kumar, Robert J. Schmidt, Stephen Van Wert, Steven J. Schiff, Richard Veale, Matthias Scheutz, Sang Wan Lee, Júlia V. Gallinaro, Stefan Rotter, Leonid L. Rubchinsky, Chung Ching Cheung, Shivakeshavan Ratnadurai‐Giridharan, Safura Rashid Shomali, Majid Nili Ahmadabadi, Hideaki Shimazaki, Seyyed Nader Rasuli, Xiaochen Zhao, Malte J. Rasch, Jens Wilting, Viola Priesemann, Anna Levina, Lucas Rudelt, Joseph T. Lizier, Richard E. Spinney, Mikail Rubinov, Michael Wibral, Ji Hyun Bak, Jonathan W. Pillow, Yuan Zaho, Il Park, J K Kang, Hae Jeong Park, Jaeson Jang, Se‐Bum Paik, Woochul Choi, Changju Lee, Min Song, Hyeonsu Lee, Youngjin Park, Ergin Yilmaz, Veli Baysal, Mahmut Özer, Daniel Saska, Thomas Nowotny, Ho Ka Chan, Alan Diamond, Christoph S. Herrmann, Micah M. Murray, Silvio Ionta, Axel Hutt, Jérémie Lefebvre, Philipp Weidel, Renato Duarte, Abigail Morrison, Jung H. Lee, Ramakrishnan Iyer, Ştefan Mihalaş, Christof Koch, Mihai A. Petrovici, Luziwei Leng, Oliver Breitwieser, David Stöckel, Ilja Bytschok, Roman Martel, Johannes Bill, Johannes Schemmel, K. Meier, Timothy B Esler, Anthony N. Burkitt, Robert R. Kerr, Bahman Tahayori, Max Nolte, Michael Reimann, Eilif Müller, Henry Markram, Antonio Parziale, Rosa Senatore, Angelo Marcelli, K. Skiker, Mounir Maouene, Samuel A. Neymotin, Alexandra H Seidenstein, Péter L. Lakatos, Terence D. Sanger, Rosemary J. Menzies, Campbell McLauchlan, Sacha J. van Albada, David J. Kedziora, Samuel A. Neymotin, Cliff C. Kerr, Benjamin A. Suter, Gordon M. Shepherd, Juhyoung Ryu, Sang-Hun Lee, Joonwon Lee, Hyang Jung Lee, Daeseob Lim, Jisung Wang, Heonsoo Lee, Nam Jung, Le Anh Quang, Seung Eun Maeng, Tae Ho Lee, Jae Woo Lee, Chang-Hyun Park, Sora Ahn, Jangsup Moon, Yun Seo Choi, Juhee Kim, Sang Beom Jun, Seungjun Lee, Hyang Woon Lee, Sumin Jo, Eunji Jun, Suin Yu, Felix Goetze, Pik‐Yin Lai, Seonghyun Kim, Jeehyun Kwag, Hyun Jae Jang, Marko Filipović, Ramón Reig, Ad Aertsen, Gilad Silberberg, Claudia Bachmann, Simone Buttler, Heidi I.L. Jacobs, Kim Dillen, Gereon R. Fink, Juraj Kukolja, Daniel Kepple, Hamza Giaffar, Dima Rinberg, Steven J. Shea, Alex Koulakov, Jyotika Bahuguna, Tom Tetzlaff, Jeanette Hellgren Kotaleski, Tim Kunze, Andre D. H. Peterson, Thomas R. Knösche, Minjung Kim, Hojeong Kim, Ji Sung Park, Ji Won Yeon, Sung-Phil Kim, Jae-Hwan Kang, Chungho Lee, Andreas Spiegler, Spase Petkoski, Matias Palva, Viktor K. Jirsa, Maria Luisa Saggio, Silvan F. Siep, William C. Stacey, Christophe Bernar, Oh-Hyeon Choung, Yong Jeong, Lee Yong-IL, Su Hyun Kim, Mir Jeong, Jeungmin Lee, Jaehyung Kwon, Jerald D. Kralik, Jaehwan Jahng, Dong‐Uk Hwang, Sang-Min Park, Seong-Kyun Kim, Hyoungkyu Kim, Pyeong Soo Kim, Sangsup Yoon, Sewoong Lim, Choongseok Park, T. Miller, Katie N Clements, Sungwoo Ahn, Eoon Hye Ji, Fadi A. Issa, Jeonghun Baek, Shigeyuki Oba, Junichiro Yoshimoto, Kenji Doya, Shin Ishii, Thiago Mosqueiro, Martin F. Strube‐Bloss, Brian E. Smith, Ramón Huerta, Michal Hadrava, Jaroslav Hlinka, Hannah Bos, Moritz Helias, Charles M. Welzig, Zachary J. Harper, Won Sup Kim, In-Seob Shin, Hyeon‐Man Baek, Seung Kee Han, René Richter, Julien Vitay, Frederick Beuth, Fred H. Hamker, Kelly Toppin, Yixin Guo, Bruce Graham, Penelope J. Kale, Leonardo L Gollo, Merav Stern, L. F. Abbott, Leonid Fedorov, Martin A. Giese, Mohammad Hovaidi Ardestani, Mohammad Javad Faraji, Kerstin Preuschoff, Wulfram Gerstner, M.J. van Gendt, Jeroen J. Briaire, Randy K. Kalkman, J.H.M. Frijns, Won Hee Lee, Sophia Frangou, Ben D. Fulcher, Patricia H. P. Tran, Alex Fornito, S. Gliske, Eugene Lim, Katherine A. Holman, Christian G. Fink, Jinseop S. Kim, Shang Mu, Kevin L. Briggman, H. Sebastian Seung, Detlef Wegener, Lisa Bohnenkamp, Udo Ernst, Anna Devor, Anders M. Dale, Glenn Terje Lines, Andy Edwards, Aslak Tveito, Espen Hagen, Johanna Senk, Markus Diesmann, Maximilian Schmidt, Rembrandt Bakker, Kelly Shen, Gleb Bezgin, Claus-Christian Hilgetag, Sacha J. van Albada, Haoqi Sun, Olga Sourina, Guang-Bin Huang, Felix Klanner, Cornelia Denk, Katharina Glomb, Adrián Ponce‐Alvarez, Matthieu Gilson, Petra Ritter, Gustavo Deco, Maria A. G. Witek, Eric Clarke, Mads Hansen, Mikkel Wallentin, Morten L. Kringelbach, Peter Vuust, Guido Klingbeil, Erik De Schutter, Wei‐Liang Chen, Yunliang Zang, Sungho Hong, Akira Takashima, Criseida Zamora, Andrew R. Gallimore, Dennis Goldschmidt, Poramate Manoonpong, Philippa J. Karoly, Dean R. Freestone, Daniel Soundry, Levin Kuhlmann, Liam Paninski, Mark Cook, Jaejin Lee, Yonatan I. Fishman, Yale E. Cohen, James A. Roberts, Luca Cocchi, Yann Sweeney, Mi Kyung Lee, Woo-Sung Jung, Youngsoo Kim, Younginha Jung, Yoon‐Kyu Song, Frédéric Chavane, Karthik Soman, Vignesh Muralidharan, V. Srinivasa Chakravarthy, Sabyasachi Shivkumar, Alekhya Mandali, Balasubramani Pragathi Priyadharsini, Hima Mehta, Catherine E. Davey, Braden A. W. Brinkman, Tyler Kekona, Fred Rieke, Michael A. Buice, Maurizio De Pittà, Hugues Berry, Nicolas Brunel, Michael Breakspear, Gary Marsat, Jordan Drew, Phillip D. Chapman, Kevin C. Daly, Samual P. Bradle, Sat Byul Seo, Jianzhong Su, Ege T. Kavalali, Justin Blackwell, LieJune Shiau, Laure Buhry, Kanishka Basnayake, Sue-Hyun Lee, Brandon A. Levy, Chris I. Baker, Timothee Leleu, Ryan T. Philips, Karishma Chhabria
Software Mentions: 7
Published: almost 10 years ago

10.1186/s12284-019-0305-y

Deciphering Genetics Underlying Stable Anaerobic Germination in Rice: Phenotyping, QTL Identification, and Interaction Analysis
Cited by: 19
Author(s): S. Ghosal, Carlos Casal, Fergie Ann Quilloy, Endang M. Septiningsih, Merlyn S. Mendioro, Shalabh Dixit
Software Mentions: 7
Published: almost 7 years ago

10.7717/peerj.281

<i>Poppr</i>: an R package for genetic analysis of populations with clonal, partially clonal, and/or sexual reproduction
Cited by: 1,961
Author(s): Zhian N. Kamvar, Javier F. Tabima, Niklaus J. Grünwald
Software Mentions: 7
Published: over 12 years ago

10.1093/gigascience/giaa135

Dadasnake, a Snakemake implementation of DADA2 to process amplicon sequencing data for microbial ecology
Cited by: 33
Author(s): Christina Weißbecker, Beatrix Schnabel, Anna Heintz‐Buschart
Software Mentions: 7
Published: over 5 years ago

10.1186/s13071-019-3860-6

Two-year longitudinal survey reveals high genetic diversity of Schistosoma mansoni with adult worms surviving praziquantel treatment at the start of mass drug administration in Uganda
Cited by: 18
Author(s): Christina L. Faust, Marco Crotti, Moses Arinaitwe, David Oguttu, Aidah Wamboko, Moses Adriko, Elizabeth K. Adekanle, Narcis B. Kabatereine, Edridah M. Tukahebwa, Alice Norton, Charlotte Gower, Joanne P. Webster, Poppy H. L. Lamberton
Software Mentions: 7
Published: over 6 years ago

10.1002/ece3.1456

Explaining forest productivity using tree functional traits and phylogenetic information: two sides of the same coin over evolutionary scale?
Cited by: 33
Author(s): Alain Paquette, Simon Joly, Christian Messier
Software Mentions: 7
Published: over 11 years ago

10.1016/S0140-6736(21)00799-6

Characterisation of in-hospital complications associated with COVID-19 using the ISARIC WHO Clinical Characterisation Protocol UK: a prospective, multicentre cohort study
Cited by: 98
Author(s): Thomas M Drake, Aya Riad, Cameron J Fairfield, Conor Egan, Stephen R Knight, Riinu Pius, Hayley Hardwick, Lisa Norman, Catherine Shaw, Kenneth A McLean, A. A. Roger Thompson, Antonia Ho, Olivia Swann, Michael Sullivan, Felipe Soares, Karl Holden, Laura Merson, Daniel Plotkin, Louise Sigfrid, Thushan I. de Silva, Michelle Girvan, Clare Jackson, Clark D Russell, Jake Dunning, Tom Solomon, Gail Carson, Piero Olliaro, Jonathan S Nguyen‐Van‐Tam, Lance Turtle, Annemarie B Docherty, Peter Openshaw, J Kenneth Baillie, Ewen M Harrison, Malcolm G Semple, J Kenneth Baillie, Malcolm G Semple, Peter Openshaw, Gail Carson, Beatrice Alex, Benjamin Bach, William Barclay, Debby Bogaert, Meera Chand, Graham Cooke, Annemarie B Docherty, Jake Dunning, Ana da Silva Filipe, Tom Fletcher, Christopher Green, Ewen M Harrison, Julian A. Hiscox, Antonia Ho, Peter Horby, Samreen Ijaz, Say Khoo, Paul Klenerman, Andrew Law, Wei Shen Lim, Alexander J. Mentzer, Laura Merson, Alison Meynert, Mahdad Noursadeghi, Shona C. Moore, Massimo Palmarini, William A. Paxton, Georgios Pollakis, Nicholas Price, Andrew Rambaut, David L. Robertson, Clark D Russell, Vanessa Sancho‐Shimizu, Janet T. Scott, Thushan I. de Silva, Louise Sigfrid, Tom Solomon, Shiranee Sriskandan, D.I. Stuart, Charlotte Summers, Richard S. Tedder, Emma C. Thomson, AA Roger Thompson, Ryan S. Thwaites, Lance Turtle, Rishi Gupta, Carlo Palmieri, Olivia Swann, Maria Zambon, Marc Dumas, Julian L. Griffin, Zoltán Takáts, Kanta Chechi, Petros Andrikopoulos, Anthonia Osagie, Michael Olanipekun, Sonia Liggi, Matthew Lewis, Gonçalo dos Santos Correia, Caroline Sands, Panteleimon G. Takis, Lynn Maslen, Hayley Hardwick, Chloe Donohue, Fiona Griffiths, Wilna Oosthuyzen, Lisa Norman, Riinu Pius, Thomas M Drake, Cameron J Fairfield, Stephen R Knight, Kenneth A McLean, Derek Murphy, Catherine Shaw, Jo Ann Dalton, Michelle Girvan, Eglė Savičiūtė, Stephanie Roberts, Janet Harrison, Laura Marsh, Marie Connor, Sophie Halpin, Clare Jackson, Carrol Gamble, Daniel Plotkin, James Lee, Gary Leeming, Andrew Law, Murray Wham, Sara Clohisey, Ross Hendry, James Scott-Brown, William Greenhalf, Victoria Shaw, Sarah E. McDonald, Seán Keating, Katie A. Ahmed, J. A. Armstrong, Milton Ashworth, Innocent G Asiimwe, Siddharth Bakshi, Samantha L. Barlow, Laura Booth, Benjamin Brennan, Katie Bullock, Benjamin W. A. Catterall, Jordan Clark, Emily Clarke, Sarah Cole, Louise Cooper, Helen Cox, Chris Davis, Oslem Dincarslan, Chris Dunn, Philip Dyer, Angela Elliott, Anthony Evans, Lorna Finch, L. W. Fisher, Terry Foster, Isabel García-Dorival, William Greenhalf, Philip Gunning, Catherine Hartley, Rebecca L. Jensen, Christopher B. Jones, Trevor R. Jones, Shadia Khandaker, Katharine King, Robyn T. Kiy, Chrysa Koukorava, Annette Lake, Suzannah Lant, Diane Latawiec, Lara Lavelle-Langham, Daniella Lefteri, Lauren Lett, Lucia A Livoti, Maria Elisabetta Mancini, Sarah E. McDonald, Laurence McEvoy, John McLauchlan, Soeren Metelmann, Nahida S. Miah, Joanna Middleton, Joyce M. Mitchell, Shona C. Moore, Ellen Murphy, Rebekah Penrice-Randal, Jack Pilgrim, Tessa Prince, Will Reynolds, Paul Ridley, Debby Sales, Victoria Shaw, Rebecca K. Shears, Benjamin Small, Krishanthi Subramaniam, Agnieska Szemiel, Aislynn Taggart, Jolanta Tanianis-Hughes, Jordan Thomas, Erwan Trochu, Libby van Tonder, Eve Wilcock, J. Eunice Zhang, Lisa Flaherty, Nicole Maziere, Emily Cass, Alejandra Doce Carracedo, Nicola Carlucci, Anthony Holmes, Hannah Massey, Lee Murphy, Nicola Wrobel, Sarah McCafferty, Kirstie Morrice, Alan Maclean, Kayode Adeniji, Daniel Agranoff, Ken Agwuh, Dhiraj Ail, Erin L. Aldera, Ana Alegria, Brian Angus, Abdul Ashish, D. Atkinson, Shahedal Bari, Gavin Barlow, Stella Barnass, Nicholas Barrett, Christopher Bassford, Sneha Basude, David Baxter, Michael Beadsworth, Jolanta Bernatoniene, John C. Berridge, Nicola Best, Pieter Bothma, David Chadwick, Robin Brittain-Long, Naomi Bulteel, Tom Burden, Andrew Burtenshaw, Vikki Caruth, David Chadwick, Duncan Chambler, Nigel Chee, Jenny Child, Srikanth Chukkambotla, Tom Clark, Paul Collini, Catherine Cosgrove, Jason Cupitt, Maria-Teresa Cutino-Moguel, Paul Dark, Chris Dawson, Samir Dervisevic, Phil Donnison, Sam Douthwaite, Andrew Drummond, Ingrid DuRand, Ahilanandan Dushianthan, Tristan Dyer, Cariad Evans, Alice C Eziefula, Chrisopher Fegan, Adam Finn, Duncan Fullerton, Sanjeev Garg, Sanjeev Garg, Atul Garg, Effrossyni Gkrania‐Klotsas, Jo Godden, Arthur R. Goldsmith, Clive Graham, Elaine Hardy, Stuart Hartshorn, Daniel Harvey, Peter Havalda, Daniel B Hawcutt, Maria Hobrok, Luke Hodgson, Anil Hormis, Michael Jacobs, Susan Jain, Paul Jennings, Agilan Kaliappan, Vidya Kasipandian, Stephen Kegg, M.C. Kelsey, Jason Kendall, Caroline Kerrison, Ian Kerslake, Oliver Koch, Gouri Koduri, George Koshy, Shondipon Laha, Steven Laird, Susan Larkin, Tamás Leiner, Patrick Lillie, James Limb, Vanessa Linnett, Jeff Little, Mark D Lyttle, Michael MacMahon, Emily Macnaughton, Ravish Mankregod, Huw Masson, Elijah Matovu, Katherine McCullough, Ruth McEwen, Manjula Meda, Gary H. Mills, Jane Minton, Mariyam Mirfenderesky, Kavya Mohandas, Quen Mok, James Moon, Elinoor Moore, Patrick Morgan, Craig C. Morris, Katherine Mortimore, Samuel Moses, Mbiye Mpenge, Rohinton Mulla, Michael V. Murphy, Megan Nagel, Thapas Nagarajan, Mark Nelson, Lillian Norris, Matthew K. O’Shea, Igor Otahal, Marlies Ostermann, Mark Pais, Carlo Palmieri, Selva Panchatsharam, Danai Papakonstantinou, Hassan Paraiso, Brij Patel, Natalie Pattison, Justin Pepperell, Mark Peters, Mandeep Phull, Stefania Pintus, Jagtur Singh Pooni, Frank A. Post, David J. Price, Rachel Prout, Nikolas Rae, Henrik Reschreiter, Tim Reynolds, Neil Richardson, Mark Roberts, Devender Roberts, Alistair Rose, Guy Rousseau, Brendan Ryan, Taranprit Saluja, Aarti Shah, Prad Shanmuga, Anil Sharma, Anna Shawcross, Jeremy Sizer, Manu Shankar-Hari, Richard Smith, Catherine Snelson, Nick Spittle, Nikki Staines, Tom Stambach, Richard Stewart, Pradeep Subudhi, Tamás Szakmány, Kate Tatham, Thomas Jo, Chris Thompson, Robert J. Thompson, Ascanio Tridente, Darell Tupper-Carey, Mary Twagira, Nick Vallotton, Rama Vancheeswaran, Lisa Vincent-Smith, Shico Visuvanathan, Alan Vuylsteke, Sam Waddy, Rachel Wake, Andrew Walden, Ingeborg Welters, Tony Whitehouse, Paul Whittaker, Ashley Whittington, Padmasayee Papineni, Meme Wijesinghe, Martin Williams, Lawrence A. Wilson, Sarah Sarah, Stephen Winchester, Martin Wiselka, Adam Wolverson, Daniel G. Wootton, Andrew Workman, Bryan Yates, Peter Young
Software Mentions: 7
Published: almost 5 years ago

10.1002/ece3.7931

The influence of phylogeny and life history on telomere lengths and telomere rate of change among bird species: A meta‐analysis
Cited by: 7
Author(s): François Criscuolo, F. Stephen Dobson, Quentin Schull
Software Mentions: 7
Published: almost 5 years ago

10.3389/fmicb.2021.645784

Soil Microsite Outweighs Cultivar Genotype Contribution to Brassica Rhizobacterial Community Structure
Cited by: 1
Author(s): Scott Klasek, Marcus T. Brock, Hilary G. Morrison, Cynthia Weinig, Loïs Maignien
Software Mentions: 7
Published: about 5 years ago

10.1186/s12862-015-0571-2

Multilocus phylogeny and ecological differentiation of the “Eupelmus urozonus species group” (Hymenoptera, Eupelmidae) in the West-Palaearctic
Cited by: 12
Author(s): Fadel Al Khatib, Astrid Cruaud, Lucian Fusu, Guénaëlle Genson, Jean‐Yves Rasplus, Nicolas Ris, Gérard Delvare
Software Mentions: 7
Published: over 10 years ago

10.1371/journal.pone.0256859

Cultural differences in stress and affection following social support receipt
Cited by: 7
Author(s): Vida Pourmand, Kendall A. Lawley, Barbara J. Lehman
Software Mentions: 7
Published: almost 5 years ago

10.1002/ece3.2837

Rapid maximum likelihood ancestral state reconstruction of continuous characters: A rerooting‐free algorithm
Cited by: 16
Author(s): Eric W. Goolsby
Software Mentions: 7
Published: over 9 years ago

10.3390/medicina55060269

A Robust Approach for Identification of Cancer Biomarkers and Candidate Drugs
Cited by: 10
Author(s): Shahjaman, Rezanur Rahman, S. M. Shahinul Islam, Md. Nurul Haque Mollah
Software Mentions: 7
Published: about 7 years ago

10.3389/fmicb.2021.685937

Metagenomic Survey of the Highly Polyphagous Anastrepha ludens Developing in Ancestral and Exotic Hosts Reveals the Lack of a Stable Microbiota in Larvae and the Strong Influence of Metamorphosis on Adult Gut Microbiota
Cited by: 10
Author(s): Martı́n Aluja, Jesús Alejandro Zamora‐Briseño, Vicente Pérez‐Brocal, Alma Altúzar-Molina, Larissa Guillén, Damaris Desgarennes, Mirna Vázquez-Rosas-Landa, Enrique Ibarra-Laclette, Alexandro Alonso-Sánchez, Andrés Moya
Software Mentions: 7
Published: almost 5 years ago

10.3389/fmicb.2020.572931

Hydrocarbon-Degrading Bacteria Alcanivorax and Marinobacter Associated With Microalgae Pavlova lutheri and Nannochloropsis oculata
Cited by: 30
Author(s): Tatyana Chernikova, Rafael Bargiela, Stepan V. Toshchakov, Vignesh Shivaraman, Evgenii A. Lunev, Michail M. Yakimov, David N. Thomas, Peter N. Golyshin
Software Mentions: 7
Published: over 5 years ago

10.1136/gutjnl-2019-318343

A blood-based prognostic biomarker in IBD
Cited by: 125
Author(s): Daniele Biasci, James C. Lee, Nurulamin M Noor, Diana R Pombal, Monica Hou, Nina Lewis, Tariq Ahmad, Ailsa Hart, Miles Parkes, Eoín McKinney, Paul Lyons, Kenneth G. C. Smith
Software Mentions: 7
Published: about 7 years ago

10.1080/19490976.2021.1921927

Fecal microbiota composition associates with the capacity of human peripheral blood monocytes to differentiate into immunogenic dendritic cells <i>in vitro</i>
Cited by: 7
Author(s): Dušan Radojević, Sergej Tomić, Dušan Mihajlović, Maja Tolinački, Bojan Pavlović, Dragana Vučević, Svetlana Bojić, Nataša Golić, Miodrag Čolić, Jelena Đokić
Software Mentions: 7
Published: over 5 years ago

10.1186/1471-2105-11-510

Functional Analysis: Evaluation of Response Intensities - Tailoring ANOVA for Lists of Expression Subsets
Cited by: 7
Author(s): Fabrice Berger, Bertrand De Meulder, Anthoula Gaigneaux, Sophie Depiereux, Eric Bareke, Michael St.Pierre, Benoît De Hertogh, Mauro Delorenzi, Eric Depiereux
Software Mentions: 7
Published: over 15 years ago

10.1371/journal.pone.0216754

Ecological contributions to body shape evolution in salamanders of the genus Eurycea (Plethodontidae)
Cited by: 9
Author(s): Hilary A. Edgington, Douglas R. Taylor
Software Mentions: 7
Published: about 7 years ago

10.3390/genes12081179

Dysregulation of Synaptic Signaling Genes Is Involved in Biology of Uterine Leiomyoma
Cited by: 2
Author(s): Jovan Krsteski, Mario Gorenjak, Igor But, Maja Pakiž, Uroš Potočnik
Software Mentions: 7
Published: almost 5 years ago

10.7554/eLife.52511

ERK3/MAPK6 controls IL-8 production and chemotaxis
Cited by: 23
Author(s): Katarzyna Bogucka, Malvika Pompaiah, Fédérico Marini, Harald Binder, Gregory S. Harms, Manuel Kaulich, Matthias Klein, Christian Michel, Markus P. Radsak, Sebastian Rosigkeit, Peter Grimminger, Hansjörg Schild, Krishnaraj Rajalingam
Software Mentions: 7
Published: about 6 years ago

10.1186/s12920-015-0153-6

Gene-expression signature functional annotation of breast cancer tumours in function of age
Cited by: 4
Author(s): Pascal Jézéquel, Zein Sharif, Hamza Lasla, Wilfried Gouraud, Catherine Guérin‐Charbonnel, Loı̈c Campion, Stéphane Chrétien, Mario Campone
Software Mentions: 7
Published: over 10 years ago

10.3389/fgene.2021.737656

Integrated Analysis of the Expression Characteristics, Prognostic Value, and Immune Characteristics of PPARG in Breast Cancer
Cited by: 5
Author(s): Jianbin Wu, Mingmin Luo, Zhuangwei Chen, Lei Li, Xiaoxi Huang
Software Mentions: 7
Published: almost 5 years ago

10.1093/conphys/coab075

Sportive lemurs elevate their metabolic rate during challenging seasons and do not enter regular heterothermy
Cited by: 3
Author(s): Janina Bethge, Jean Claude Razafimampiandra, Arne Wulff, Kathrin H. Dausmann
Software Mentions: 7
Published: over 5 years ago

10.1002/cti2.1127

High‐dimensional analyses reveal a distinct role of T‐cell subsets in the immune microenvironment of gastric cancer
Cited by: 18
Author(s): Minyu Wang, Yen-Yu Huang, Joseph C Kong, Yu Sun, Daniela Tantalo, Han Xian Aw Yeang, Le Ying, Feng Yan, Dakang Xu, Heloise M. Halse, Natasha Di Costanzo, Ian Gordon, Catherine Mitchell, Laura K. Mackay, Rita A. Busuttil, Paul J. Neeson, Alex Boussioutas
Software Mentions: 7
Published: over 6 years ago

10.1371/journal.ppat.1008864

Using Plasmodium knowlesi as a model for screening Plasmodium vivax blood-stage malaria vaccine targets reveals new candidates
Cited by: 14
Author(s): Duncan Ndungu Ndegwa, Prasun Kundu, Jessica B. Hostetler, Alejandro Marín-Menéndez, Theo Sanderson, Kioko Mwikali, Lisa Verzier, Rachael Coyle, Sophie H. Adjalley, Julian C. Rayner
Software Mentions: 7
Published: almost 5 years ago

10.12688/f1000research.16032.3

epiflows: an R package for risk assessment of travel-related spread of disease
Cited by: 3
Author(s): Paula Moraga, Ilaria Dorigatti, Zhian N. Kamvar, Paweł Piątkowski, Salla Toikkanen, VP Nagraj, Christl A. Donnelly, Thibaut Jombart
Software Mentions: 7
Published: almost 7 years ago

10.3390/cancers13102432

Computational Treatment Simulations to Assess the Need for Personalized Tamoxifen Dosing in Breast Cancer Patients of Different Biogeographical Groups
Cited by: 1
Author(s): Anna Mueller‐Schoell, Robin Michelet, Lena Klopp‐Schulze, Madelé van Dyk, Thomas E. Mürdter, Matthias Schwab, Markus Joerger, Wilhelm Huisinga, Gerd Mikus, Charlotte Kloft
Software Mentions: 7
Published: about 5 years ago

10.1093/gigascience/giy093

Leveraging multiple transcriptome assembly methods for improved gene structure annotation
Cited by: 110
Author(s): Luca Venturini, Shabhonam Caim, Gemy Kaithakottil, Daniel Mapleson, David Swarbreck
Software Mentions: 7
Published: almost 8 years ago

10.1186/s12885-018-4345-2

The impact of pharmacokinetic gene profiles across human cancers
Cited by: 3
Author(s): Michael T. Zimmermann, Terry M. Therneau, Jean Pierre A. Kocher
Software Mentions: 7
Published: about 8 years ago

10.3390/nu13020303

Investigation of Iron and Zinc Concentrations in Human Milk in Correlation to Maternal Factors: An Observational Pilot Study in Poland
Cited by: 7
Author(s): Agnieszka Bzikowska‐Jura, Piotr Sobieraj, Magdalena Michalska-Kacymirow, Aleksandra Wesołowska
Software Mentions: 7
Published: over 5 years ago

10.3389/fmolb.2021.624951

Metabolism-Relevant Molecular Classification Identifies Tumor Immune Microenvironment Characterization and Immunotherapeutic Effect in Cervical Cancer
Cited by: 4
Author(s): Luyi Li, Hui Gao, Danhan Wang, Hao Jiang, Hongzhu Wang, Jiajian Yu, Xin Jiang, Changjiang Huang
Software Mentions: 7
Published: almost 5 years ago

10.1038/s41598-020-71805-1

Northstar enables automatic classification of known and novel cell types from tumor samples
Cited by: 8
Author(s): Fabio Zanini, Bojk A. Berghuis, Robert C. Jones, Benedetta Nicolis di Robilant, Rachel Yuan Nong, Jeffrey A. Norton, Michael F. Clarke, Stephen R. Quake
Software Mentions: 7
Published: almost 6 years ago

10.1038/s41598-019-46761-0

Lower Attentional Skills predict increased exploratory foraging patterns
Cited by: 16
Author(s): Charlotte Van den Driessche, Françoise Chevrier, Axel Cleeremans, Jérôme Sackur
Software Mentions: 7
Published: almost 7 years ago

10.3389/fimmu.2020.01166

Non-sterilizing, Infection-Permissive Vaccination With Inactivated Influenza Virus Vaccine Reshapes Subsequent Virus Infection-Induced Protective Heterosubtypic Immunity From Cellular to Humoral Cross-Reactive Immune Responses
Cited by: 6
Author(s): Angela Choi, Lorena Itatí Ibáñez, Shirin Strohmeier, Florian Krammer, Adolfo Garcı́a-Sastre, Michael Schotsaert
Software Mentions: 7
Published: about 6 years ago

10.1371/journal.pone.0147871

A TCRβ Repertoire Signature Can Predict Experimental Cerebral Malaria
Cited by: 7
Author(s): Encarnita Mariotti‐Ferrandiz, Hang-Phuong Pham, Sophie Dulauroy, Olivier Gorgette, David Klatzmann, Pierre‐André Cazenave, Sylviane Pied, Adrien Six
Software Mentions: 7
Published: over 10 years ago

10.1371/journal.pone.0209231

Genotypic differences between strains of the opportunistic pathogen Corynebacterium bovis isolated from humans, cows, and rodents
Cited by: 11
Author(s): Christopher Cheleuitte-Nieves, Christopher A. Gulvik, John R. McQuiston, Ben W. Humrighouse, Melissa Bell, Aaron Villarma, Vincent A. Fischetti, Lars F. Westblade, Neil S Lipman
Software Mentions: 7
Published: over 7 years ago

10.3389/fonc.2021.612588

Pre- and Postoperative Models for Prediction of Recurrence in Non-B, Non-C Hepatocellular Carcinoma
Cited by: 1
Author(s): Kongying Lin, Qizhen Huang, Lei Wang, Jianxing Zeng, Zongren Ding, Hongzhi Liu, Jun Fu, Pengfei Guo, Zhenwei Chen, Yongyi Zeng, Weiping Zhou, Jingfeng Liu
Software Mentions: 7
Published: over 5 years ago

10.1371/journal.pone.0102457

The “Bear” Essentials: Actualistic Research on Ursus arctos arctos in the Spanish Pyrenees and Its Implications for Paleontology and Archaeology
Cited by: 62
Author(s): Maite Arilla, Jordi Rosell, Ruth Blasco, Manuel Domínguez‐Rodrigo, Travis Rayne Pickering
Software Mentions: 7
Published: almost 12 years ago

10.1186/1756-0500-5-360

LXtoo: an integrated live Linux distribution for the bioinformatics community
Cited by: 5
Author(s): Guangchuang Yu, Li-Gen Wang, Xiaohong Meng, Qing-Yu He
Software Mentions: 7
Published: almost 14 years ago

10.1038/srep28657

Pubertal development in healthy children is mirrored by DNA methylation patterns in peripheral blood
Cited by: 57
Author(s): Kristian Almstrup, Marie Johansen, Alexander Busch, Casper P Hagen, John Nielsen, Jørgen Holm Petersen, Anders Juul
Software Mentions: 7
Published: about 10 years ago

10.1186/1756-0500-4-331

Agile parallel bioinformatics workflow management using Pwrake
Cited by: 20
Author(s): Hiroyuki Mishima, Kensaku Sasaki, M. Tanaka, Osamu Tatebe, Koh-ichiro Yoshiura
Software Mentions: 7
Published: almost 15 years ago

10.3390/jcm8081128

NEWS2 is Superior to qSOFA in Detecting Sepsis with Organ Dysfunction in the Emergency Department
Cited by: 60
Author(s): Lisa Mellhammar, Adam Linder, Jonas Tverring, Bértil Christensson, John H. Boyd, Parham Sendi, Per Åkesson, Fredrik Kahn
Software Mentions: 7
Published: almost 7 years ago

10.1016/j.celrep.2020.107694

A Landscape of Murine Long Non-Coding RNAs Reveals the Leading Transcriptome Alterations in Adipose Tissue during Aging
Cited by: 24
Author(s): Qi Zhou, Qianfen Wan, Yuxi Jiang, Jin Liu, Qiang Li, Li Sun
Software Mentions: 7
Published: about 6 years ago

10.3389/fnins.2018.00727

Teaching Computational Reproducibility for Neuroimaging
Cited by: 15
Author(s): K. Jarrod Millman, Matthew Brett, Ross Barnowski, Jean‐Baptiste Poline
Software Mentions: 7
Published: over 7 years ago

10.1186/1471-2164-14-204

RNAseq versus genome-predicted transcriptomes: a large population of novel transcripts identified in an Illumina-454 Hydra transcriptome
Cited by: 63
Author(s): Yvan Wenger, Brigitte Galliot
Software Mentions: 7
Published: over 13 years ago