Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pgen.1008482

https://doi.org/10.1371/journal.pgen.1008482

A transcriptome-based signature of pathological angiogenesis predicts breast cancer patient survival

Cited by: 12
Author(s): Rodrigo Guarischi-Sousa, Jhonatas Sirino Monteiro, Lilian Costa Alecrim, Jussara S. Michaloski, Laura Beatriz da Silva Cardeal, Elisa Napolitano Ferreira, Dirce Maria Carraro, Diana Noronha Nunes, Emmanuel Dias-Neto, Jüri Reimand, Paul C. Boutros, João Carlos Setúbal, Ricardo J. Giordano
Published: almost 5 years ago

Software Mentions 7

bioconductor: beadarray
Quality assessment and low-level analysis for Illumina BeadArray data
Papers that mentioned: 94
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: lattice
Trellis Graphics for R
Papers that mentioned: 251
cran: latticeExtra
Extra Graphical Utilities Based on Lattice
Papers that mentioned: 60
cran: randomForestSRC
Fast Unified Random Forests for Survival, Regression, and Classification (RF-SRC)
Papers that mentioned: 143
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: lattice
A framework for developing data models, including schema development and documentation.
Papers that mentioned: 251