Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1016/j.omtn.2017.08.010

https://doi.org/10.1016/j.omtn.2017.08.010

Cited by: 2
Author(s): Pantazis Theotokis, Louise Usher, Christopher K. Kortschak, Ed C. Schwalbe, Sterghios A. Moschos
Published: over 6 years ago

Software Mentions 7

bioconductor: Biostrings

Efficient manipulation of biological strings
Papers that mentioned: 220

bioconductor: Rsamtools

Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import
Papers that mentioned: 138

bioconductor: ShortRead

FASTQ input and manipulation
Papers that mentioned: 119

cran: fasta

Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848

cran: stringi

Fast and Portable Character String Processing Facilities
Papers that mentioned: 34

pypi: bowtie

Interactive Dashboard Toolkit.
Papers that mentioned: 1,566

pypi: fasta

The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848