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cran: buildmer
Stepwise Elimination and Term Reordering for Mixed-Effects RegressionPapers that mentioned: 4
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cran: koRpus
Text Analysis with Emphasis on POS Tagging, Readability, and Lexical DiversityPapers that mentioned: 4
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bioconductor: bacon
Controlling bias and inflation in association studies using the empirical null distributionPapers that mentioned: 4
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bioconductor: mBPCR
Bayesian Piecewise Constant Regression for DNA copy number estimationPapers that mentioned: 4
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cran: NetworkToolbox
Methods and Measures for Brain, Cognitive, and Psychometric Network AnalysisPapers that mentioned: 4
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cran: OmicsPLS
Data Integration with Two-Way Orthogonal Partial Least SquaresPapers that mentioned: 4
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bioconductor: RareVariantVis
A suite for analysis of rare genomic variants in whole genome sequencing dataPapers that mentioned: 4
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pypi: lefse
LEfSe determines the features (organisms, clades, operational taxonomic units, genes, or functions) most likely to explain differences between classes by coupling standard tests for statistical significance with additional tests encoding biological consistency and effect relevance.Papers that mentioned: 4
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cran: introgress
methods for analyzing introgression between divergent lineagesPapers that mentioned: 4
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pypi: blogit
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cran: minqa
Derivative-Free Optimization Algorithms by Quadratic ApproximationPapers that mentioned: 4
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bioconductor: Pigengene
Infers biological signatures from gene expression dataPapers that mentioned: 4
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pypi: clearcut
A straightforward and lightweight logging and tracing libraryPapers that mentioned: 4
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bioconductor: iASeq
iASeq: integrating multiple sequencing datasets for detecting allele-specific eventsPapers that mentioned: 4
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pypi: binary
Easily convert between binary and SI units (kibibyte, kilobyte, etc.).Papers that mentioned: 3
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cran: d3Network
Tools for creating D3 JavaScript network, tree, dendrogram, and Sankey graphs from RPapers that mentioned: 3
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bioconductor: MetCirc
Navigating mass spectral similarity in high-resolution MS/MS metabolomics data metabolomics dataPapers that mentioned: 3
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cran: npIntFactRep
Nonparametric Interaction Tests for Factorial Designs with Repeated MeasuresPapers that mentioned: 3
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cran: Newdistns
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cran: OTUtable
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pypi: randomize
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bioconductor: flowCHIC
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cran: nomogramFormula
Calculate Total Points and Probabilities for NomogramPapers that mentioned: 3
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cran: kmlShape
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cran: InformationValue
Performance Analysis and Companion Functions for Binary Classification ModelsPapers that mentioned: 3
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pypi: batchtools
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pypi: geosearch
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bioconductor: switchBox
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