Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: bioconductor: HiCcompare
https://packages.ecosyste.ms/registries/bioconductor.org/packages/HiCcompare
HiCcompare: Joint normalization and comparative analysis of multiple Hi-C datasets
1 version
Latest release: about 1 year ago
3 dependent packages
15,871 downloads total
Papers Mentioning HiCcompare 4
10.1186/s12859-018-2288-x
HiCcompare: an R-package for joint normalization and comparison of HI-C datasetsCited by: 94
Author(s): John C. Stansfield, Kellen Garrison Cresswell, Vladimir I. Vladimirov, Mikhail G. Dozmorov
Software Mentions: 4
Published: over 6 years ago
10.1186/s12859-021-04113-8
Deciphering hierarchical organization of topologically associated domains through change-point testingCited by: 11
Author(s): Haipeng Xing, Yingru Wu, Michael Q. Zhang, Yong Chen
Software Mentions: 3
Published: over 3 years ago
10.1093/bioinformatics/btab173
BART3D: inferring transcriptional regulators associated with differential chromatin interactions from Hi-C dataCited by: 6
Author(s): Zhenjia Wang, Yifan Zhang, Chongzhi Zang
Software Mentions: 3
Published: almost 4 years ago
10.1093/gigascience/giaa009
De novo genome assembly and Hi-C analysis reveal an association between chromatin architecture alterations and sex differentiation in the woody plant Jatropha curcasCited by: 15
Author(s): Maosheng Chen, Longjian Niu, Miaomiao Zhao, Chuan-Jia Xu, Bang-Zhen Pan, Qi Fu, Yongfu Tao, Hua He, Chaoqi Hou, Zeng-Fu Xu
Software Mentions: 3
Published: almost 5 years ago