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Projects: bioconductor: BEclear

https://packages.ecosyste.ms/registries/bioconductor.org/packages/BEclear

Correction of batch effects in DNA methylation data
2 versions
Latest release: over 2 years ago
13,462 downloads total

Enhanced Analysis
Educational Contributors: jennifer.wokaty@sph.cuny.edu
Repository Activity:
Repository Owner: Helms Group - Saarland University (organization)
Chair of Computational Biology at the Center for Bioinformatics, Saarland University Academic
README Analysis: DOI Found
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +20 Educational commit emails
    1 contributors with educational email addresses
  • +20 Academic repository owner
    Repository owned by academic institution
  • +15 Institutional repository owner
    Repository owned by research institution
  • +2 Science terms in README
    1 scientific terms found in README
  • +10 DOI references
    1 DOI references found in README
Penalties:
  • -10 No science terms in description
    No scientific terms found in description
Very Likely Science (100)

Papers Mentioning BEclear 3

10.1371/journal.pone.0159921
BEclear: Batch Effect Detection and Adjustment in DNA Methylation Data
Cited by: 19
Author(s): Ruslan Akulenko, Markus Merl, Volkhard Helms
Software Mentions: 8
Published: over 9 years ago
10.7554/eLife.57843
Increased longevity due to sexual activity in mole-rats is associated with transcriptional changes in the HPA stress axis
Cited by: 17
Author(s): Arne Sahm, Matthias Platzer, Philipp Koch, Yoshiyuki Henning, Martin Bens, Marco Groth, Hynek Burda, Sabine Begall, Saskia Ting, Moritz Goetz, Paul Van Daele, Magdalena Staniszewska, Jasmin Klose, Pedro Fragoso Costa, Steve Hoffmann, Karol Szafranski, Philip Dammann
Software Mentions: 7
Published: almost 5 years ago
10.3389/fgene.2019.00325
The Cord Blood Insulin and Mitochondrial DNA Content Related Methylome
Cited by: 5
Author(s): Brigitte Reimann, Bram G. Janssen, Rossella Alfano, Akram Ghantous, Almudena Espín-Pérez, Theo M. de Kok, Nelly D. Saenen, Bianca Cox, Oliver Robinson, Marc Chadeau‐Hyam, Joris Penders, Zdenko Herceg, Paolo Víneis, Tim S. Nawrot, Michelle Plusquin
Software Mentions: 6
Published: almost 7 years ago