Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Projects: cran: ggplot2

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
48 versions
Latest release: about 1 year ago
4,921 dependent packages
2,865,232 downloads last month

Papers Mentioning ggplot2 11,441

10.7150/thno.54917
Single-cell transcriptome profiling reveals vascular endothelial cell heterogeneity in human skin
Cited by: 36
Author(s): Qingyang Li, Zhenlai Zhu, Lei Wang, Yi‐Ting Lin, Hui Fang, Jie Lei, Tianyu Cao, Gang Wang, Erle Dang
Software Mentions: 6
Published: almost 4 years ago
10.1016/j.dib.2020.106424
An exploratory assessment of a multidimensional healthcare and economic data on COVID-19 in Nigeria
Cited by: 7
Author(s): Ezekiel Ogundepo, Joseph Bamidele Awotunde, Olubayo Adekanmbi, Olalekan Akinsande, Oluwatobi Banjo, Emeka Ogbuju, Francisca Oladipo, Olawale Victor Abimbola, Ehizokhale Oseghale, Oluwatobi Babajide
Software Mentions: 6
Published: almost 4 years ago
10.3390/biology10080734
Genetic Diversity and Population Differentiation of Kashgarian Loach (Triplophysa yarkandensis) in Xinjiang Tarim River Basin
Cited by: 4
Author(s): Xiaoyun Zhou, Shaokui Yi, Wenhao Zhao, Qiong Zhou, Jianzhong Shen, Dapeng Li, Bin Huo, Rong Tang
Software Mentions: 6
Published: over 3 years ago
10.1038/s41598-019-51452-x
NADH dehydrogenases Nuo and Nqr1 contribute to extracellular electron transfer by Shewanella oneidensis MR-1 in bioelectrochemical systems
Cited by: 15
Author(s): Cody S. Madsen, Michaela A. TerAvest
Software Mentions: 6
Published: about 5 years ago
10.3389/fmicb.2018.00792
Agricultural Freshwater Pond Supports Diverse and Dynamic Bacterial and Viral Populations
Cited by: 25
Author(s): Jessica Chopyk, Sarah Allard, Daniel J. Nasko, Anthony Bui, Emmanuel F. Mongodin, Amy R. Sapkota
Software Mentions: 6
Published: over 6 years ago
10.7717/peerj.8371
The effects of 2,3,7,8-tetrachlorodibenzo-<i>p</i>-dioxin (TCDD) on the transcriptome of aryl hydrocarbon receptor (AhR) knock-down porcine granulosa cells
Cited by: 4
Author(s): Monika Ruszkowska, Agnieszka Sadowska, Anna Nynca, Karina Orlowska, Sylwia Świgońska, Tomasz Molcan, Łukasz Paukszto, J Jastrzebski, Renata E. Ciereszko
Software Mentions: 6
Published: almost 5 years ago
10.3389/fpls.2021.675227
Homologs of Circadian Clock Proteins Impact the Metabolic Switch Between Light and Dark Growth in the Cyanobacterium Synechocystis sp. PCC 6803
Cited by: 4
Author(s): N. M. Scheurer, Yogeswari Rajarathinam, Stefan Timm, Christin Köbler, Joachim Kopka, Martin Hagemann, Annegret Wilde
Software Mentions: 6
Published: over 3 years ago
10.1186/s40168-016-0174-1
Host species identity, site and time drive temperate tree phyllosphere bacterial community structure
Cited by: 163
Author(s): Isabelle Laforest‐Lapointe, Christian Messier, Steven W. Kembel
Software Mentions: 6
Published: over 8 years ago
10.3390/toxics9070164
A Multidisciplinary Approach for the Assessment of Origin, Fate and Ecotoxicity of Metal(loid)s from Legacy Coal Mine Tailings
Cited by: 2
Author(s): Honorine Gauthier-Manuel, Diane Radola, Flavien Choulet, Martine Buatier, Raphaël Vauthier, Tatiana Morvan, Walter Chavanne, Frédéric Gimbert
Software Mentions: 6
Published: over 3 years ago
10.1038/s41598-019-50864-z
Circular RNA differential expression in blood cell populations and exploration of circRNA deregulation in pediatric acute lymphoblastic leukemia
Cited by: 62
Author(s): Enrico Gaffo, Elena Boldrin, Anna Dal Molin, Silvia Bresolin, Annagiulia Bonizzato, Luca Trentin, Chiara Frasson, Klaus‐Michael Debatin, Lueder Hinrich Meyer, Geertruy te Kronnie, Stefania Bortoluzzi
Software Mentions: 6
Published: about 5 years ago
10.3390/toxins11010019
Interannual Variability of Dinophysis acuminata and Protoceratium reticulatum in a Chilean Fjord: Insights from the Realized Niche Analysis
Cited by: 23
Author(s): Catharina Alves‐de‐Souza, José Luis Iriarte, Jorge I. Mardones
Software Mentions: 6
Published: almost 6 years ago
10.1038/s41426-018-0204-0
A viral race for primacy: co-infection of a natural pair of low and highly pathogenic H7N7 avian influenza viruses in chickens and embryonated chicken eggs
Cited by: 19
Author(s): Annika Graaf, Reiner Ulrich, Pavlo Maksimov, David Scheibner, Susanne Koethe, Elsayed M. Abdelwhab, Thomas C. Mettenleiter, Martin Beer, Timm Harder
Software Mentions: 6
Published: almost 6 years ago
10.1371/journal.pone.0235726
Diversity of mosquitoes (Diptera: Culicidae) collected in different types of larvitraps in an Amazon rural settlement
Cited by: 8
Author(s): João Aprígio Guerra de Almeida, Heliana Christy Matos Belchior, Claudia María Ríos-Velásquez, Felipe Arley Costa Pessoa
Software Mentions: 6
Published: about 4 years ago
10.1371/journal.pone.0237272
Passenger-surface microbiome interactions in the subway of Mexico City
Cited by: 10
Author(s): Daniela Vargas-Robles, Carolina Gonzalez-Cedillo, Apolinar M. Hernández, Luis David Alcaraz, Mariana Peimbert
Software Mentions: 6
Published: over 4 years ago
10.3389/fmicb.2020.00954
Persistence of a Core Microbiome Through the Ontogeny of a Multi-Host Parasite
Cited by: 22
Author(s): Fátima Jorge, Nolwenn M. Dheilly, Robert Poulin
Software Mentions: 6
Published: over 4 years ago
10.1016/j.immuni.2020.03.011
Stromal Cells Covering Omental Fat-Associated Lymphoid Clusters Trigger Formation of Neutrophil Aggregates to Capture Peritoneal Contaminants
Cited by: 47
Author(s): Lucy H. Jackson-Jones, Peter Smith, Jordan Raymond Portman, Marlene S Magalhaes, Katie J. Mylonas, Matthieu Vermeren, Mark Nixon, Beth E. P. Henderson, Ross Dobie, Sonja Vermeren, Laura Denby, Neil C. Henderson, Damian J. Mole, C Benezech
Software Mentions: 6
Published: over 4 years ago
10.1080/17453674.2019.1624339
Reduced periprosthetic fracture rate when changing from a tapered polished stem to an anatomical stem for cemented hip arthroplasty: an observational prospective cohort study with a follow-up of 2 years
Cited by: 17
Author(s): Jabbar Mohammed, Sebastian Mukka, Carl-Johan Hedbeck, Ghazi Chammout, Max Gordon, Olof Sköldenberg
Software Mentions: 6
Published: over 5 years ago
10.1038/s41598-019-50839-0
Understanding the phyllosphere microbiome assemblage in grape species (Vitaceae) with amplicon sequence data structures
Cited by: 36
Author(s): Prashant Singh, Sylvain Santoni, Audrey Weber, Patrice This, Jean‐Pierre Péros
Software Mentions: 6
Published: about 5 years ago
10.1080/22221751.2021.1942228
Single-cell immune checkpoint landscape of PBMCs stimulated with <i>Candida albicans</i>
Cited by: 8
Author(s): Wei‐Wei Deng, Zhen Su, Panpan Liang, Yubo Ma, Yufang Liu, Kai Zhang, Yi Zhang, Ting Liang, Jinyan Shao, X. Liu, Wenling Han, Ruoyu Li
Software Mentions: 6
Published: almost 4 years ago
10.1038/s41598-019-50811-y
Pollinators enhance crop yield and shorten the growing season by modulating plant functional characteristics: A comparison of 23 canola varieties
Cited by: 21
Author(s): George C. Adamidis, Ralph V. Cartar, Andony Melathopoulos, Stephen F. Pernal, Shelley E Hoover
Software Mentions: 6
Published: about 5 years ago
10.1038/s41426-018-0069-2
Neurotropism and behavioral changes associated with Zika infection in the vector <i>Aedes aegypti</i>
Cited by: 26
Author(s): Julie Gaburro, Asim Bhatti, Jenni Harper, Isabelle Jeanne, Megan Dearnley, Diane Green, Saeid Nahavandi, Prasad N. Paradkar, Jean‐Bernard Duchemin
Software Mentions: 6
Published: over 6 years ago
10.1038/s41598-019-50248-3
Integrated network analysis identifies hsa-miR-4756-3p as a regulator of FOXM1 in Triple Negative Breast Cancer
Cited by: 6
Author(s): Yuanliang Gu, Wenjuan Wang, Xuyao Wang, Hong-Yi Xie, Xiaojuan Ye, Peng Shu
Software Mentions: 6
Published: about 5 years ago
10.3389/fimmu.2021.632798
Comprehensive Transcriptomic Analysis Identifies Novel Antiviral Factors Against Influenza A Virus Infection
Cited by: 11
Author(s): Ao Zhou, Dong Xia, Mengyun Liu, Bin Tang
Software Mentions: 6
Published: over 3 years ago
10.1080/17453674.2020.1749810
Fate of patients with slipped capital femoral epiphysis (SCFE) in later life: risk of obesity, hypothyroidism, and death in 2,564 patients with SCFE compared with 25,638 controls
Cited by: 4
Author(s): Yasmin D. Hailer
Software Mentions: 6
Published: over 4 years ago
10.1016/j.xcrm.2021.100267
Cabozantinib and dasatinib synergize to induce tumor regression in non-clear cell renal cell carcinoma
Cited by: 2
Author(s): Hui Wen Lue, Daniel S. Derrick, Soumya Rao, Ahna Van Gaest, Larry C. Cheng, Jennifer Podolak, Samantha Lawson, Changhui Xue, Devin Garg, Ralph E. White, Christopher W. Ryan, Justin M. Drake, Anna Ritz, Laura M. Heiser, George V. Thomas
Software Mentions: 6
Published: over 3 years ago
10.3390/cells10030644
Highly Species-Specific Foliar Metabolomes of Diverse Woody Species and Relationships with the Leaf Economics Spectrum
Cited by: 7
Author(s): Rabea Schweiger, Eva Castells, Luca Da Sois, Jordi Martínez‐Vilalta, Caroline Müller
Software Mentions: 6
Published: over 3 years ago
10.1080/22221751.2020.1799723
Dysregulation in Akt/mTOR/HIF-1 signaling identified by proteo-transcriptomics of SARS-CoV-2 infected cells
Cited by: 203
Author(s): Sofia Appelberg, Soham Gupta, Sara Svensson Akusjärvi, Anoop T. Ambikan, Flora Mikaeloff, Elisa Saccon, Ákos Végvári, Rui Benfeitas, Maike Sperk, Marie Ståhlberg, Shuba Krishnan, Kamal Singh, Josef Penninger, Alì Mirazimi, Ujjwal Neogi
Software Mentions: 6
Published: almost 5 years ago
10.3389/fmicb.2021.689855
Wheat Rhizosphere Metagenome Reveals Newfound Potential Soil Zn-Mobilizing Bacteria Contributing to Cultivars’ Variation in Grain Zn Concentration
Cited by: 5
Author(s): Sen Wang, Zikang Guo, Li Wang, Yan Zhang, Fan Jiang, Xingshu Wang, Lei Yin, Bo Liu, Hangwei Liu, Hengchao Wang, Anqi Wang, Yingxue Ren, Conghui Liu, Wei Fan, Zhaohui Wang
Software Mentions: 6
Published: over 3 years ago
10.7717/peerj.3953
Male sex pheromone components in <i> Heliconius</i> butterflies released by the androconia affect female choice
Cited by: 70
Author(s): Kathy Darragh, Sohini Vanjari, Florian A. Mann, María Fernanda González-Rojas, Colin R. Morrison, Camilo Salazar, Carolina Pardo‐Díaz, Richard M. Merrill, W. Owen McMillan, Stefan Schulz, Chris D. Jiggins
Software Mentions: 6
Published: about 7 years ago
10.1038/s41598-019-49027-x
Association of Aggresomes with Survival Outcomes in Pediatric Medulloblastoma
Cited by: 4
Author(s): Maha Yehia, Hala Taha, Asmaa Salama, Nada Amer, Amal Mosaab, Omneya Hassanain, Amal Refaat, Dina Yassin, Ahmed Elhemaly, Soha Ahmed, Mohamed El-Beltagy, Osama Shaalan, Shahenda El‐Naggar
Software Mentions: 6
Published: about 5 years ago
10.1186/s12864-018-4782-y
Gene expression profiling in the developing secondary palate in the absence of Tbx1 function
Cited by: 2
Author(s): Maria Zoupa, Guilherme M. Xavier, Stephanie Bryan, Ioannis Theologidis, Matthew Arno, Martyn T. Cobourne
Software Mentions: 6
Published: over 6 years ago
10.3389/fpls.2021.715309
An Affordable Image-Analysis Platform to Accelerate Stomatal Phenotyping During Microscopic Observation
Cited by: 2
Author(s): Yosuke Toda, Toshiaki Tameshige, Masakazu Tomiyama, Toshinori Kinoshita, Kentaro Shimizu
Software Mentions: 6
Published: over 3 years ago
10.3389/fpls.2021.615277
Novel and Transgressive Salinity Tolerance in Recombinant Inbred Lines of Rice Created by Physiological Coupling-Uncoupling and Network Rewiring Effects
Cited by: 12
Author(s): Isaiah Catalino M. Pabuayon, Ai Kitazumi, Kevin R. Cushman, Rakesh Kumar Singh, Glenn B. Gregorio, Balpreet K. Dhatt, Masoud Zabet-Moghaddam, Harkamal Walia, Benildo G. de los Reyes
Software Mentions: 6
Published: almost 4 years ago
10.3390/diagnostics11040623
Impact of Chronic Prostatitis on the PI-RADS Score 3: Proposal for the Addition of a Novel Binary Suffix
Cited by: 1
Author(s): Sascha Merat, Theresa Blümlein, Markus Klarhöfer, Dominik Nickel, Gad Singer, Frank G. Zöllner, Stefan O. Schoenberg, Kubik-Huch Ra, Daniel Hausmann, Lukas Hefermehl
Software Mentions: 6
Published: over 3 years ago
10.1038/s41398-021-01531-3
Gut microbial biomarkers for the treatment response in first-episode, drug-naïve schizophrenia: a 24-week follow-up study
Cited by: 22
Author(s): Xiuxia Yuan, Yunpeng Wang, Xue Li, Jiajun Jiang, Yulin Kang, Lijuan Pang, Peifen Zhang, Ang Li, Luxian Lv, Ole A. Andreassen, Xiaoduo Fan, Shaohua Hu, Xueqin Song
Software Mentions: 6
Published: over 3 years ago
10.1186/s12864-020-06987-z
Global transcriptomic responses orchestrate difenoconazole resistance in Penicillium spp. causing blue mold of stored apple fruit
Cited by: 6
Author(s): Franz J. Lichtner, Verneta L. Gaskins, Kerik D. Cox, Wayne M. Jurick
Software Mentions: 6
Published: over 4 years ago
10.1186/s12864-016-3020-8
RNA-Seq analysis of seasonal and individual variation in blood transcriptomes of healthy managed bottlenose dolphins
Cited by: 27
Author(s): Jeanine S. Morey, Marion G. Neely, Denise Lunardi, Paul E. Anderson, Lori H. Schwacke, Michelle R. Campbell, Frances M. Van Dolah
Software Mentions: 6
Published: about 8 years ago
10.1186/s12864-020-6767-x
Multipathway synergy promotes testicular transition from growth to spermatogenesis in early-puberty goats
Cited by: 11
Author(s): Dongdong Bo, Xunping Jiang, Guiqiong Liu, Feng Xu, Ronggui Hu, Teketay Wassie, Yuqing Chong, S. Sohail Ahmed, Chenhui Liu, Shishay Girmay
Software Mentions: 6
Published: over 4 years ago
10.3389/fpls.2020.598082
Producing Enhanced Yield and Nutritional Pigmentation in Lollo Rosso Through Manipulating the Irradiance, Duration, and Periodicity of LEDs in the Visible Region of Light
Cited by: 15
Author(s): Laura Cammarisano, Iain S. Donnison, P. R. H. Robson
Software Mentions: 6
Published: almost 4 years ago
10.1371/journal.pone.0237713
Isn’t high school bad enough already? Rates of gender harassment and institutional betrayal in high school and their association with trauma-related symptoms
Cited by: 9
Author(s): Monika N Lind, Alexis A. Adams-Clark, Jennifer J. Freyd
Software Mentions: 6
Published: over 4 years ago
10.1186/s40168-020-00954-2
Bacterial community assemblages in classroom floor dust of 50 public schools in a large city: characterization using 16S rRNA sequences and associations with environmental factors
Cited by: 10
Author(s): Ju‐Hyeong Park, Angela R. Lemons, Jerry Roseman, Brett J. Green, Jean M. Cox‐Ganser
Software Mentions: 6
Published: almost 4 years ago
10.3389/fmicb.2018.01892
Identification of Halophilic Microbes in Lung Fibrotic Tissue by Oligotyping
Cited by: 11
Author(s): Corina N. D’Alessandro-Gabazza, Celia Méndez–García, Osamu Hataji, Sara Westergaard, Fumiaki Watanabe, Taro Yasuma, Masaaki Toda, Hajime Fujimoto, Kota Nishihama, Kentaro Fujiwara, Osamu Taguchi, Tetsu Kobayashi, Roderick I. Mackie, Isaac Cann, Esteban C. Gabazza
Software Mentions: 6
Published: about 6 years ago
10.3389/fonc.2019.00221
Non-coding and Coding Transcriptional Profiles Are Significantly Altered in Pediatric Retinoblastoma Tumors
Cited by: 25
Author(s): Swetha Rajasekaran, Lakshmi Dhevi N. Selvan, Kathleen Dotts, Ranjith Kumar, Pukhraj Rishi, Vikas Khetan, Madhoolika Bisht, Karthikeyan Sivaraman, Subrmanian Krishnakumar, Debashis Sahoo, Moray J. Campbell, Sailaja Elchuri, Wayne Miles
Software Mentions: 6
Published: over 5 years ago
10.1186/s12864-018-4902-8
Genome variants associated with RNA splicing variations in bovine are extensively shared between tissues
Cited by: 30
Author(s): Ruidong Xiang, Ben J. Hayes, Christy J. Vander Jagt, Iona M. MacLeod, Majid Khansefid, P.J. Bowman, Zehu Yuan, Claire P. Prowse-Wilkins, Coralie M. Reich, Brett Mason, Josie B. Garner, L. C. Marett, Yizhou Chen, Sunduimijid Bolormaa, Hans D. Daetwyler, Amanda J. Chamberlain, Michael E. Goddard
Software Mentions: 6
Published: over 6 years ago
10.1186/s12864-018-5066-2
A comparative analysis of library prep approaches for sequencing low input translatome samples
Cited by: 52
Author(s): Yang Song, Béatrice Milon, Sandra Ott, Xüna Zhao, Lisa Sadzewicz, Amol C. Shetty, Erich T. Boger, Luke J. Tallon, Robert J. Morell, Anup Mahurkar, Ronna Hertzano
Software Mentions: 6
Published: about 6 years ago
10.1101/2021.02.23.432450
The proximal proteome of 17 SARS-CoV-2 proteins links to disrupted antiviral signaling and host translation
Cited by: 4
Author(s): Jordan M. Meyers, Muthukumar Ramanathan, Ronald L. Shanderson, Laura K. Donohue, Ian Ferguson, Margaret Guo, Deepti Rao, Weili Miao, David L. Reynolds, Xue Yang, Yang Zhao, Yen-Yu Yang, Yinsheng Wang, Paul A. Khavari
Software Mentions: 6
Published: almost 4 years ago
10.1371/journal.pone.0158117
Food for Pollinators: Quantifying the Nectar and Pollen Resources of Urban Flower Meadows
Cited by: 208
Author(s): D. M. Hicks, Pierre Ouvrard, Katherine C. R. Baldock, Mathilde Baude, Mark A. Goddard, William E. Kunin, Nadine Mitschunas, Jane Memmott, Helen Morse, Maria Nikolitsi, Lynne M. Osgathorpe, Simon G. Potts, Kirsty M. Robertson, Anna Scott, Frazer Sinclair, Duncan B. Westbury, Graham N. Stone
Software Mentions: 6
Published: over 8 years ago
10.3389/fmolb.2020.582911
Comprehensive Analysis of the Relationships Between Tumor Mutation Burden With Immune Infiltrates in Cervical Cell Carcinoma
Cited by: 9
Author(s): Cankun Zhou, Chaomei Li, Shunqing Peng, Liangcheng Zhou, Huan Li
Software Mentions: 6
Published: about 4 years ago
10.18632/aging.103994
Molecular identification of protein kinase C beta in Alzheimer's disease
Cited by: 6
Author(s): Zhike Zhou, Fenqin Chen, Shanshan Zhong, Yi Zhou, Rongwei Zhang, Kexin Kang, Xiaoqian Zhang, Ying Xu, Mei Zhao, Chuansheng Zhao
Software Mentions: 6
Published: about 4 years ago
10.1534/g3.118.200986
Genomic Selection with Allele Dosage in <i>Panicum maximum</i> Jacq.
Cited by: 34
Author(s): Letícia Aparecida de Castro Lara, M. F. Santos, Liana Jank, Lucimara Chiari, Mariane de Mendonça Vilela, Rodrigo R. Amadeu, José Fortunato Ferreira Santos, Guilherme da Silva Pereira, Zhao‐Bang Zeng, Antônio Augusto Franco Garcia
Software Mentions: 6
Published: over 5 years ago
10.1093/annweh/wxz095
Accelerometer-Measured Physical Activity at Work and Need for Recovery: A Compositional Analysis of Cross-sectional Data
Cited by: 9
Author(s): Matthew L Stevens, Patrick Crowley, Charlotte Lund Rasmussen, David Hallman, Ole Steen Mortensen, Clas‐Håkan Nygård, Andreas Holtermann
Software Mentions: 6
Published: almost 5 years ago
10.1371/journal.pone.0215192
Circulating Th17.1 cells as candidate for the prediction of therapeutic response to abatacept in patients with rheumatoid arthritis: An exploratory research
Cited by: 17
Author(s): Shinji Maeda, Satoshi Osaga, Tomoyo Maeda, Norihisa Takeda, Shinya Tamechika, Taio Naniwa, Akio Niimi
Software Mentions: 6
Published: about 5 years ago
10.3389/fmicb.2018.00186
Resource Availability Drives Responses of Soil Microbial Communities to Short-term Precipitation and Nitrogen Addition in a Desert Shrubland
Cited by: 70
Author(s): Weiwei She, Yuxuan Bai, Yuqing Zhang, Shugao Qin, Wei Feng, Yanfei Sun, Jufeng Zheng, Bin Wu
Software Mentions: 6
Published: almost 7 years ago
10.1534/g3.119.400180
Hybrid Assembly of the Genome of the Entomopathogenic Nematode <i>Steinernema carpocapsae</i> Identifies the X-Chromosome
Cited by: 12
Author(s): Lorrayne Serra, Marissa Macchietto, Aide Macias-Muñoz, Cassandra McGill, Isaryhia Rodriguez, Bryan Rodriguez, Rabi Murad, A Mortazavi
Software Mentions: 6
Published: over 5 years ago
10.1371/journal.pone.0243746
Image-based screen capturing misfolding status of Niemann-Pick type C1 identifies potential candidates for chaperone drugs
Cited by: 7
Author(s): Ryuta Shioi, Fumika Karaki, Hirosuke Yoshioka, Tomomi Noguchi‐Yachide, Minoru Ishikawa, Kosuke Dodo, Yuichi Hashimoto, Mikiko Sodeoka, Kenji Ohgane
Software Mentions: 6
Published: almost 4 years ago
10.1017/S0950268821000510
Epidemiology and transmission characteristics of early COVID-19 cases, 20 January–19 March 2020, in Bavaria, Germany
Cited by: 10
Author(s): Stefanie Böhm, Tom Woudenberg, D. Chen, Durdica Marosevic, Merle M. Böhmer, Lisa Hansen, Jacco Wallinga, Andreas Sing, Katharina Katz
Software Mentions: 6
Published: almost 4 years ago
10.3389/fonc.2021.617289
Derivation and Validation of a Prognostic Model for Cancer Dependency Genes Based on CRISPR-Cas9 in Gastric Adenocarcinoma
Cited by: 16
Author(s): Wenjie Zhou, Junqing Li, Xiufen Lu, Fangjie Liu, Tailai An, Xing Xiao, Zi Chong Kuo, Wenhui Wu, Yulong He
Software Mentions: 6
Published: almost 4 years ago
10.2196/24475
Benchmarking Triage Capability of Symptom Checkers Against That of Medical Laypersons: Survey Study
Cited by: 27
Author(s): Malte L Schmieding, Rudolf Mörgeli, Maike A L Schmieding, Markus A. Feufel, Felix Balzer
Software Mentions: 6
Published: over 3 years ago
10.1186/s12864-017-4386-y
Global accumulation of circRNAs during aging in Caenorhabditis elegans
Cited by: 127
Author(s): Mariela Cortés-López, Matthew Gruner, Daphne A. Cooper, Hannah N. Gruner, Alexandru-Ioan Voda, Alexander M. van der Linden, Pedro Miura
Software Mentions: 6
Published: almost 7 years ago
10.1093/conphys/coaa001
Stoichiometric and stable isotope ratios of wild lizards in an urban landscape vary with reproduction, physiology, space and time
Cited by: 7
Author(s): Andrew M. Durso, Geoffrey D. Smith, Spencer B. Hudson, Susannah S. French
Software Mentions: 6
Published: almost 5 years ago
10.3389/fonc.2021.721644
CDT1 Is a Novel Prognostic and Predictive Biomarkers for Hepatocellular Carcinoma
Cited by: 14
Author(s): Chenhui Cai, Ying Zhang, Xu Hu, Wenhui Hu, Sizhen Yang, Hao Qiu, Tongwei Chu
Software Mentions: 6
Published: about 3 years ago
10.1371/journal.pone.0109760
Copy Number Loss of the Interferon Gene Cluster in Melanomas Is Linked to Reduced T Cell Infiltrate and Poor Patient Prognosis
Cited by: 164
Author(s): Peter S. Linsley, Cate Speake, Elizabeth Whalen, Damien Chaussabel
Software Mentions: 6
Published: about 10 years ago
10.3389/fmicb.2018.00381
The Impact of Maltitol-Sweetened Chewing Gum on the Dental Plaque Biofilm Microbiota Composition
Cited by: 16
Author(s): Bart J. F. Keijser, Tim J. van den Broek, Dagmar Else Slot, Lodewic van Twillert, Jolanda Kool, Clémentine Thabuis, Michel Ossendrijver, Fridus A. Van der Weijden, R.C. Montijn
Software Mentions: 6
Published: over 6 years ago
10.1186/s12864-019-5927-3
Alternative polyadenylation produces multiple 3’ untranslated regions of odorant receptor mRNAs in mouse olfactory sensory neurons
Cited by: 5
Author(s): Mohamed Doulazmi, Cyril Cros, Isabelle Dusart, Alain Trembleau, Caroline Dubacq
Software Mentions: 6
Published: over 5 years ago
10.3389/fmicb.2020.00390
Response of Tomato Rhizosphere Bacteria to Root-Knot Nematodes, Fenamiphos and Sampling Time Shows Differential Effects on Low Level Taxa
Cited by: 3
Author(s): Mariantonietta Colagiero, Laura Cristina Rosso, Domenico Catalano, Leonardo Schena, Aurelio Ciancio
Software Mentions: 6
Published: over 4 years ago
10.1186/s12863-021-00991-2
The transcription factor reservoir and chromatin landscape in activated plasmacytoid dendritic cells
Cited by: 4
Author(s): Ritu Mann-Nüttel, Shafaqat Ali, Patrick Petzsch, Karl Köhrer, Judith Alferink, Stefanie Scheu
Software Mentions: 6
Published: about 3 years ago
10.1242/dev.199604
The combined action of Esrrb and Nr5a2 is essential for murine naïve pluripotency
Cited by: 16
Author(s): Nicola Festuccia, Nick Owens, Almira Chervova, Agnès Dubois, Pablo Navarro
Software Mentions: 6
Published: about 3 years ago
10.3390/cells9071571
Boosting the Intra-Articular Efficacy of Low Dose Corticosteroid through a Biopolymeric Matrix: An In Vivo Model of Osteoarthritis
Cited by: 12
Author(s): Matilde Tschon, Francesca Salamanna, Lúcia Martini, G. Giavaresi, Luca Lorenzini, Laura Calzà, Milena Fini
Software Mentions: 6
Published: over 4 years ago
10.1371/journal.pone.0256678
Hospital-level factors associated with death during pneumonia-associated hospitalization among adults—New York City, 2010–2014
Cited by: 0
Author(s): Kate Whittemore, Kristian M. Garcia, Chaorui Huang, Sungwoo Lim, Demetre Daskalakis, Neil M. Vora, David E. Lucero
Software Mentions: 6
Published: about 3 years ago
10.1242/dev.195883
The BMP antagonist gremlin 1 contributes to the development of cortical excitatory neurons, motor balance and fear responses
Cited by: 4
Author(s): Mari Ichinose, Nobumi Suzuki, Tongtong Wang, Hiroki Kobayashi, Laura Vrbanac, Joseph Kim Fai Ng, Josephine Wright, Tamsin R.M. Lannagan, Krystyna A. Gieniec, Martin Lewis, Ryosuke Ando, Atsushi Enomoto, Simon Koblar, Paul Q. Thomas, Daniel L. Worthley, Susan L. Woods
Software Mentions: 6
Published: over 3 years ago
10.1371/journal.pone.0226501
pyKNEEr: An image analysis workflow for open and reproducible research on femoral knee cartilage
Cited by: 11
Author(s): Serena Bonaretti, Garry E. Gold, Gary S. Beaupré
Software Mentions: 6
Published: almost 5 years ago
10.1111/1556-4029.14482
Getting Rid of Dichotomous Sex Estimations: Why Logistic Regression Should be Preferred Over Discriminant Function Analysis
Cited by: 13
Author(s): Björn Bartholdy, Elena Sandoval, Menno L. P. Hoogland, Sarah Schrader
Software Mentions: 6
Published: over 4 years ago
10.18632/aging.202603
Functional analysis of brain derived neurotrophic factor (BDNF) in Huntington’s disease
Cited by: 6
Author(s): Zhike Zhou, Shanshan Zhong, Rongwei Zhang, Kexin Kang, Xiaoqian Zhang, Ying Xu, Chuansheng Zhao, Mei Zhao
Software Mentions: 6
Published: almost 4 years ago
10.1186/s12862-018-1244-8
Microhabitat change drives diversification in pholcid spiders
Cited by: 34
Author(s): Jonas Eberle, Dimitar Dimitrov, Alejandro Valdez‐Mondragón, Bernhard A. Huber
Software Mentions: 6
Published: about 6 years ago
10.7554/eLife.56279
Emergence and diversification of a highly invasive chestnut pathogen lineage across southeastern Europe
Cited by: 21
Author(s): Lea Stauber, Thomas Badet, Alice Feurtey, Simone Prospero, Daniel Croll
Software Mentions: 6
Published: over 3 years ago
10.3390/jof7040249
Improvements in the Resistance of the Banana Species to Fusarium Wilt: A Systematic Review of Methods and Perspectives
Cited by: 15
Author(s): Anelita de Jesus Rocha, Julianna Matos da Silva Soares, Fernanda dos Santos Nascimento, Adriadna Souza Santos, Vanusia Batista de Oliveira Amorim, Cláudia Fortes Ferreira, Fernando Haddad, Janay Almeida dos Santos-Serejo, Édson Perito Amorim
Software Mentions: 6
Published: over 3 years ago
10.1016/j.dib.2019.104444
Data-based investigation on the performance of an independent gas turbine for electricity generation using real power measurements and other closely related parameters
Cited by: 1
Author(s): Ayodele Benjamin Esan, Vincent Ebhohime Ehiaguina, C. O. A. Awosope, Lanre Olatomiwa, Dickson Egbune
Software Mentions: 6
Published: about 5 years ago
10.1155/2018/5463762
Adiponectin and Leptin at Early Pregnancy: Association to Actual Glucose Disposal and Risk for GDM—A Prospective Cohort Study
Cited by: 25
Author(s): Latife Bozkurt, Christian Göbl, Sabina Baumgartner‐Parzer, Anton Luger, Giovanni Pacini, Alexandra Kautzky–Willer
Software Mentions: 6
Published: over 6 years ago
10.7717/peerj.2452
Canopy position has a profound effect on soybean seed composition
Cited by: 27
Author(s): Steven C. Huber, Kunzhi Li, Randall L. Nelson, Alexander Ulanov, Catherine M. DeMuro, Ivan Baxter
Software Mentions: 6
Published: about 8 years ago
10.1186/s40168-020-00957-z
Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale
Cited by: 11
Author(s): Paula B. Matheus Carnevali, Adi Lavy, Alex D. Thomas, Alexander Crits-Christoph, Spencer Diamond, Raphaël Méheust, Matthew R. Olm, Allison Sharrar, Shufei Lei, Dong Wang, Nicola Falco, Nicholas J. Bouskill, Michelle Newcomer, Peter Nico, Haruko M. Wainwright, Dipankar Dwivedi, Kenneth H. Williams, Susan S. Hubbard, Jillian F. Banfield
Software Mentions: 6
Published: over 3 years ago
10.1371/journal.ppat.1009280
Intracellular niche-specific profiling reveals transcriptional adaptations required for the cytosolic lifestyle of Salmonella enterica
Cited by: 29
Author(s): TuShun R. Powers, Amanda L. Haeberle, Alexander V. Predeus, Disa L. Hammarlöf, Jennifer A. Cundiff, Zeus Saldaña‐Ahuactzi, Karsten Hokamp, Jay C. D. Hinton, Leigh A. Knodler
Software Mentions: 6
Published: about 3 years ago
10.1371/journal.pone.0248756
Veteran trees have divergent effects on beetle diversity and wood decomposition
Cited by: 2
Author(s): Ross Wetherbee, Tone Birkemoe, Ryan C. Burner, Anne Sverdrup‐Thygeson
Software Mentions: 6
Published: over 3 years ago
10.1186/s12862-020-01679-4
Multi-model seascape genomics identifies distinct environmental drivers of selection among sympatric marine species
Cited by: 9
Author(s): Erica S. Nielsen, Romina Henriques, Maria Beger, Robert J. Toonen, Sophie von der Heyden
Software Mentions: 6
Published: about 4 years ago
10.1186/s12859-020-03648-6
A computational framework for modeling and studying pertussis epidemiology and vaccination
Cited by: 4
Author(s): Paolo Castagno, Simone Pernice, Gianni Ghetti, Massimiliano Povero, Lorenzo Pradelli, Daniela Paolotti, Gianfranco Balbo, Matteo Sereno, Marco Beccuti
Software Mentions: 6
Published: about 4 years ago
10.3389/fmicb.2018.02681
Ice Nucleation Activity and Aeolian Dispersal Success in Airborne and Aquatic Microalgae
Cited by: 36
Author(s): Sylvie V. M. Tesson, Tina Šantl-Temkiv
Software Mentions: 6
Published: about 6 years ago
10.18632/oncotarget.10962
Epigenetic reprogramming and aberrant expression of PRAME are associated with increased metastatic risk in Class 1 and Class 2 uveal melanomas
Cited by: 85
Author(s): Matthew G. Field, Michael A. Durante, Christina L. Decatur, Berçin Tarlan, Kristen M. Oelschlager, John F. Stone, Jeffim N. Kuznetsov, Anne M. Bowcock, Stefan Kurtenbach, J. William Harbour
Software Mentions: 6
Published: over 8 years ago
10.2196/20185
Mental Health and Behavior of College Students During the Early Phases of the COVID-19 Pandemic: Longitudinal Smartphone and Ecological Momentary Assessment Study
Cited by: 443
Author(s): Jeremy F. Huckins, Alex W DaSilva, Weichen Wang, Elin Hedlund, Courtney Rogers, Subigya Nepal, Jialing Wu, Mikio Obuchi, Eilis I Murphy, Meghan L. Meyer, Dylan D. Wagner, Paul E. Holtzheimer, Andrew T. Campbell
Software Mentions: 6
Published: over 4 years ago
10.1038/s41598-019-45844-2
Intracellular Zn2+ transients modulate global gene expression in dissociated rat hippocampal neurons
Cited by: 35
Author(s): Lynn Sanford, Margaret C. Carpenter, Amy E. Palmer
Software Mentions: 6
Published: over 5 years ago
10.1371/journal.pone.0250725
Parrotfish corallivory on stress-tolerant corals in the Anthropocene
Cited by: 7
Author(s): Víctor Huertas, Renato A. Morais, Roberta M. Bonaldo, David R. Bellwood
Software Mentions: 6
Published: about 3 years ago
10.1534/g3.120.401050
The <i>Gossypium longicalyx</i> Genome as a Resource for Cotton Breeding and Evolution
Cited by: 29
Author(s): Corrinne E. Grover, Mengqiao Pan, Daojun Yuan, Mark A. Arick, Guanjing Hu, Logan Brase, David M. Stelly, Zefu Lu, Robert J. Schmitz, Daniel G. Peterson, Jonathan F. Wendel, Joshua A. Udall
Software Mentions: 6
Published: over 4 years ago
10.1186/s12859-020-3404-2
IPCO: Inference of Pathways from Co-variance analysis
Cited by: 3
Author(s): Mrinmoy Das, Tarini Shankar Ghosh, Ian B. Jeffery
Software Mentions: 6
Published: almost 5 years ago
10.7554/eLife.22057
T cell receptor repertoires of mice and humans are clustered in similarity networks around conserved public CDR3 sequences
Cited by: 121
Author(s): Asaf Madi, Asaf Poran, Eric Shifrut, Shlomit Reich-Zeliger, Erez Greenstein, Irena Zaretsky, Tomer Arnon, François Van Laethem, Alfred Singer, Jinghua Lu, Peter D. Sun, Irun R. Cohen, Nir Friedman
Software Mentions: 6
Published: over 7 years ago
10.1038/s41598-019-45365-y
Xylella fastidiosa: climate suitability of European continent
Cited by: 56
Author(s): Gottfried Martin, Astrid Cruaud, Jean‐Claude Streito, Jean‐Yves Rasplus, Jean‐Pierre Rossi
Software Mentions: 6
Published: over 5 years ago
10.3389/fmicb.2021.724980
Appendectomy Is Associated With Alteration of Human Gut Bacterial and Fungal Communities
Cited by: 16
Author(s): Shanshan Cai, Yanyun Fan, Bangzhou Zhang, J. H. Lin, Xiaomin Yang, Yunpeng Liu, Jingjing Liu, Jianlin Ren, Hui Xu
Software Mentions: 6
Published: about 3 years ago
10.3389/fnut.2019.00045
What's Normal? Microbiomes in Human Milk and Infant Feces Are Related to Each Other but Vary Geographically: The INSPIRE Study
Cited by: 135
Author(s): Kimberly A. Lackey, Janet E. Williams, Courtney L. Meehan, Jessica A. Zachek, Elizabeth D. Benda, William J. Price, James A. Foster, Daniel Sellen, Elizabeth Kamau-Mbuthia, Egidioh W. Kamundia, Samwel Mbugua, Sophie E. Moore, Andrew M. Prentice, Debela Gindola K, Linda J. Kvist, Gloria E. Otoo, Cristina García-Carral, Esther Jiménez, Lorena Ruíz, Juan M. Rodríguez, Rossina G. Pareja, Lars Bode, Mark A. McGuire, Michelle K. McGuire
Software Mentions: 6
Published: over 5 years ago
10.1186/s10194-019-0987-y
Predicting treatment response using pharmacy register in migraine
Cited by: 6
Author(s): Thomas Folkmann Hansen, Mona Ameri Chalmer, Thilde Marie Haspang, Lisette J. A. Kogelman, Jes Olesen
Software Mentions: 6
Published: over 5 years ago
10.1186/1471-2105-14-S5-S10
An optimized algorithm for detecting and annotating regional differential methylation
Cited by: 101
Author(s): Shengyong Li, Francine E. Garrett-Bakelman, Altuna Akalin, Paul Zumbo, Ross L. Levine, Bik To, Ian D. Lewis, Anna L. Brown, Richard J. D’Andrea, Ari Melnick, Christopher E. Mason
Software Mentions: 6
Published: over 11 years ago
10.1371/journal.pone.0236200
Shelter use interactions of invasive lionfish with commercially and ecologically important native invertebrates on Caribbean coral reefs
Cited by: 6
Author(s): Christina L. Hunt, Dominic A. Andradi‐Brown, Callum J. Hudson, Joshua Bennett-Williams, Frankie Noades, Jocelyn Curtis-Quick, Owen T. Lewis, Dan A. Exton
Software Mentions: 6
Published: over 4 years ago
10.3390/ani11030625
RNA-Seq Implies Divergent Regulation Patterns of LincRNA on Spermatogenesis and Testis Growth in Goats
Cited by: 6
Author(s): Dongdong Bo, Xunping Jiang, Guiqiong Liu, Ronggui Hu, Yuqing Chong
Software Mentions: 6
Published: almost 4 years ago
10.1534/g3.120.401234
Genetic Characterization of a Wheat Association Mapping Panel Relevant to Brazilian Breeding Using a High-Density Single Nucleotide Polymorphism Array
Cited by: 8
Author(s): Greg Mellers, Jorge González Aguilera, Nick Bird, A. L. V. Bonato, Sandro Bonow, E. Caierão, Luciano Consoli, F. M. Santana, James Simmonds, Andrew Steed, G. A. M. Torres, Cristóbal Uauy, Tally I C Wright, P. L. Scheeren, P. Nicholson, James Cockram
Software Mentions: 6
Published: over 4 years ago