Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1128/mSphere.00454-19

https://doi.org/10.1128/mSphere.00454-19

Integrated Meta-omics Reveals a Fungus-Associated Bacteriome and Distinct Functional Pathways in Clostridioides difficile Infection

Cited by: 24
Author(s): David B. Stewart, Justin Wright, Maria Fowler, Christopher J. McLimans, Vasily Tokarev, Isabella Amaniera, Owen Baker, Hoi‐Tong Wong, Jeffrey L. Brabec, Rebecca Drucker, Regina Lamendella
Published: over 5 years ago

Software Mentions 6

bioconductor: metagenomeSeq
Statistical analysis for sparse high-throughput sequencing
Papers that mentioned: 169
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: omics
'–omics' Data Analysis Toolbox
Papers that mentioned: 13
cran: plotly
Create Interactive Web Graphics via 'plotly.js'
Papers that mentioned: 163
pypi: omics
omics: A Python package for omics data analysis.
Papers that mentioned: 13
pypi: plotly
An open-source, interactive data visualization library for Python
Papers that mentioned: 163