Ecosyste.ms: Papers
An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.
Projects: cran: omics
https://packages.ecosyste.ms/registries/cran.r-project.org/packages/omics
'–omics' Data Analysis Toolbox
6 versions
Latest release: almost 8 years ago
197 downloads last month
Papers Mentioning omics 13
10.1128/mSphere.00454-19
Integrated Meta-omics Reveals a Fungus-Associated Bacteriome and Distinct Functional Pathways in Clostridioides difficile InfectionCited by: 24
Author(s): David B. Stewart, Justin Wright, Maria Fowler, Christopher J. McLimans, Vasily Tokarev, Isabella Amaniera, Owen Baker, Hoi‐Tong Wong, Jeffrey L. Brabec, Rebecca Drucker, Regina Lamendella
Software Mentions: 6
Published: about 5 years ago
10.1371/journal.pcbi.1008182
MONET: Multi-omic module discovery by omic selectionCited by: 9
Author(s): Nimrod Rappoport, Roy Safra, Ron Shamir
Software Mentions: 5
Published: about 4 years ago
10.3389/fimmu.2018.01620
Footprints of Sepsis Framed Within Community Acquired Pneumonia in the Blood TranscriptomeCited by: 26
Author(s): Lydia Hopp, Henry Loeffler‐Wirth, Lilit Nersisyan, Arsen Arakelyan, Hans Binder
Software Mentions: 3
Published: over 6 years ago
10.3389/fpsyt.2021.685656
Metabolic Profiling Indicates Diversity in the Metabolic Physiologies Associated With Maternal Postpartum Depressive SymptomsCited by: 4
Author(s): Emma Bränn, Christina J. Malavaki, Emma Fransson, Maria-Konstantina Ioannidi, Hanna Henriksson, Fotios C. Papadopoulos, George P. Chrousos, Maria I. Klapa, Alkistis Skalkidou
Software Mentions: 3
Published: over 3 years ago
10.3390/genes10070522
Sperm Proteome Analysis and Identification of Fertility-Associated Biomarkers in Unexplained Male InfertilityCited by: 36
Author(s): Manesh Kumar Panner Selvam, Ashok Agarwal, Peter Natesan Pushparaj, Saradha Baskaran, Hocine Bendou
Software Mentions: 3
Published: over 5 years ago
10.1093/ije/dyaa188
Metabolic profiles of socio-economic position: a multi-cohort analysisCited by: 9
Author(s): Oliver Robinson, Alice R Carter, Mika Ala‐Korpela, Juan P. Casas, Nishi Chaturvedi, Jorgen Engmann, Laura D Howe, Alun D. Hughes, Marjo‐Riitta Järvelin, Mika Kähönen, Ville Karhunen, Diana Kuh, Tina Shah, Yoav Ben‐Shlomo, Reecha Sofat, Chung-Ho E Lau, Terho Lehtimäki, Usha Menon, Olli T. Raitakari, Andy Ryan, Rui Providência, Stephanie Smith, Julie Taylor, Therese Tillin, Jorma Viikari, Andrew Wong, Aroon D. Hingorani, Mika Kivimäki, Paolo Víneis
Software Mentions: 3
Published: almost 4 years ago
10.3389/fmicb.2021.706044
Improving Fungal Cultivability for Natural Products DiscoveryCited by: 11
Author(s): Teppo Rämä, C. Alisha Quandt
Software Mentions: 2
Published: about 3 years ago
10.3389/fgene.2020.555886
Exploring the Limits of Combined Image/'omics Analysis for Non-cancer Histological PhenotypesCited by: 6
Author(s): Paul J. Gallins, Ehsan Saghapour, Yi‐Hui Zhou
Software Mentions: 2
Published: about 4 years ago
10.3390/biology10020129
Metabolic Reprogramming, Questioning, and Implications for CancerCited by: 8
Author(s): Pierre Jacquet, Angélique Stéphanou
Software Mentions: 2
Published: almost 4 years ago
10.3390/life11060574
Identification of Metabolic Phenotypes in Young Adults with Obesity by 1H NMR Metabolomics of Blood SerumCited by: 10
Author(s): Khin Thandar Htun, Jie Pan, Duanghathai Pasanta, Montree Tungjai, Chatchanok Udomtanakunchai, Sirirat Chancharunee, S. Kaewjaeng, Hong Joo Kim, J. Kaewkhao, S. Kothan
Software Mentions: 2
Published: over 3 years ago
10.1111/pbi.13247
<i>Ta<scp>CYP</scp>81D5</i>, one member in a wheat cytochrome P450 gene cluster, confers salinity tolerance via reactive oxygen species scavengingCited by: 53
Author(s): Meng Wang, Jiarui Yuan, Lumin Qin, Weiming Shi, Guangmin Xia, Shuwei Liu
Software Mentions: 2
Published: about 5 years ago
10.1002/ece3.5576
The past, present, and future of coral heat stress studiesCited by: 75
Author(s): Maha J. Cziesielski, Sebastian Schmidt‐Roach, Manuel Aranda
Software Mentions: 2
Published: about 5 years ago
10.1186/1471-2164-11-1
Adaptation of Hansenula polymorpha to methanol: a transcriptome analysisCited by: 235
Author(s): Tim van Zutphen, Richard J. S. Baerends, Kim A. Susanna, Anne de Jong, Oscar P. Kuipers, Marten Veenhuis, Ida J. van der Klei
Software Mentions: 2
Published: almost 15 years ago