An open API service providing mapping between scientific papers and software projects that are mentioned in them.

Papers: 10.1371/journal.ppat.1009280

https://doi.org/10.1371/journal.ppat.1009280

Intracellular niche-specific profiling reveals transcriptional adaptations required for the cytosolic lifestyle of Salmonella enterica

Cited by: 29
Author(s): TuShun R. Powers, Amanda L. Haeberle, Alexander V. Predeus, Disa L. Hammarlöf, Jennifer A. Cundiff, Zeus Saldaña‐Ahuactzi, Karsten Hokamp, Jay C. D. Hinton, Leigh A. Knodler
Published: almost 4 years ago

Software Mentions 6

bioconductor: BitSeq
Papers that mentioned: 28
Unlikely Science (0)
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
Very Likely Science (100)
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
Very Likely Science (100)
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
Very Likely Science (100)
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
Very Likely Science (100)
pypi: PACE
Data Quality of Experimental Data
Papers that mentioned: 13,779
Very Likely Science (90)