Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1128/mBio.02634-20

https://doi.org/10.1128/mBio.02634-20

The Role of the Gut Microbiome in Resisting Norovirus Infection as Revealed by a Human Challenge Study

Cited by: 22
Author(s): Nastassia V. Patin, Angela Peña-Gonzalez, Janet K. Hatt, Christine L. Moe, Amy Kirby, Konstantinos T. Konstantinidis
Published: almost 4 years ago

Software Mentions 6

cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: Nonpareil
Metagenome Coverage Estimation and Projections for 'Nonpareil'
Papers that mentioned: 33
cran: vegan
Community Ecology Package
Papers that mentioned: 6,903
pypi: MicrobeCensus
A command-line tool for estimating average genome size from shotgun sequence data
Papers that mentioned: 25
pypi: script
Help for writing shell scripts in Python
Papers that mentioned: 575
pypi: vsearch
The Head First Python Search Tools
Papers that mentioned: 284