cran: ggplot2 | Projects | Ecosyste.ms: Papers

10.1371/journal.pone.0205291

CytoBinning: Immunological insights from multi-dimensional data
Cited by: 1
Author(s): Yang Shen, Benjamin Chaigne-Delalande, Richard W. Lee, Wolfgang Losert
Software Mentions: 6
Published: over 7 years ago

10.1002/ece3.2360

Scale dependent drivers of wild bee diversity in tropical heterogeneous agricultural landscapes
Cited by: 32
Author(s): Prasenjit Basu, Arpan Kumar Parui, Sulagna Chatterjee, Arpan Dutta, Pushan Chakraborty, Stuart P. M. Roberts, Barbara Smith
Software Mentions: 6
Published: almost 10 years ago

10.1371/journal.pone.0242675

Diversity of bacteria populations associated with different thallus regions of the brown alga Laminaria digitata
Cited by: 20
Author(s): Maureen W. Ihua, Jamie A. FitzGerald, Freddy Guihéneuf, Stephen A. Jackson, Marcus J. Claesson, Dagmar B. Stengel, Alan D. W. Dobson
Software Mentions: 6
Published: over 5 years ago

10.1002/jrsm.1428

The Kilim plot: A tool for visualizing network meta‐analysis results for multiple outcomes
Cited by: 15
Author(s): Michael Seo, Toshi A Furukawa, Areti Angeliki Veroniki, Toby Pillinger, Anneka Tomlinson, Georgia Salanti, Andrea Cipriani, Orestis Efthimiou
Software Mentions: 6
Published: almost 6 years ago

10.7150/ijbs.62553

DDX39 as a predictor of clinical prognosis and immune checkpoint therapy efficacy in patients with clear cell renal cell carcinoma
Cited by: 11
Author(s): Yewei Bao, Aimin Jiang, Kai Dong, Xinxin Gan, Wenliang Gong, Zhenjie Wu, Bing Liu, Yi Bao, Jie Wang, Linhui Wang
Software Mentions: 6
Published: over 5 years ago

10.3389/fmicb.2018.00186

Resource Availability Drives Responses of Soil Microbial Communities to Short-term Precipitation and Nitrogen Addition in a Desert Shrubland
Cited by: 70
Author(s): Weiwei She, Yuxuan Bai, Yuqing Zhang, Shugao Qin, Wei Feng, Yanfei Sun, Jufeng Zheng, Bin Wu
Software Mentions: 6
Published: over 8 years ago

10.3389/fimmu.2021.676173

Interleukin-17A Causes Osteoarthritis-Like Transcriptional Changes in Human Osteoarthritis-Derived Chondrocytes and Synovial Fibroblasts In Vitro
Cited by: 20
Author(s): Jolet Y Mimpen, Mathew Baldwin, Adam P. Cribbs, Martin Philpott, Andrew Carr, Stephanie G. Dakin, Sarah Snelling
Software Mentions: 6
Published: about 5 years ago

10.1038/s41598-020-69635-2

Rapid fragmentation of microplastics by the freshwater amphipod Gammarus duebeni (Lillj.)
Cited by: 91
Author(s): Alicia Mateos-Cárdenas, John O’Halloran, Frank N.A.M. van Pelt, Marcel A. K. Jansen
Software Mentions: 6
Published: almost 6 years ago

10.3390/cells8060517

Fecal Microbiota Transplantation Controls Murine Chronic Intestinal Inflammation by Modulating Immune Cell Functions and Gut Microbiota Composition
Cited by: 46
Author(s): Claudia Burrello, Maria Rita Giuffrè, Angeli Dominique Macandog, Angélica Díaz‐Basabe, Fulvia Milena Cribiù, Gianluca Lopez, Francesca Borgo, Luigi Nezi, Flavio Caprioli, Maurizio Vecchi, Federica Facciotti
Software Mentions: 6
Published: about 7 years ago

10.1016/j.cub.2020.11.013

When Natural Behavior Engages Working Memory
Cited by: 45
Author(s): Dejan Draschkow, Melvin Kallmayer, Anna C. Nobre
Software Mentions: 6
Published: over 5 years ago

10.1128/mSystems.00540-20

Soil Bacterial Communities Exhibit Strong Biogeographic Patterns at Fine Taxonomic Resolution
Cited by: 29
Author(s): Sean K. Bay, Melodie A. McGeoch, Osnat Gillor, Nimrod Wieler, David J. Palmer, D. James Baker, Steven L. Chown, Chris Greening
Software Mentions: 6
Published: almost 6 years ago

10.1161/JAHA.119.013152

Cardiac Myosin‐Binding Protein C to Diagnose Acute Myocardial Infarction in the Pre‐Hospital Setting
Cited by: 11
Author(s): Thomas E Kaier, Carsten Stengaard, Jack Marjot, Jacob Thorsted Sørensen, Bashir Alaour, Stavroula Stavropoulou-Tatla, Christian Juhl Terkelsen, Lindsey W. Williams, Kristian Thygesen, Ekkehard Weber, Michael Marber, Hans Erik Bøtker
Software Mentions: 6
Published: almost 7 years ago

10.3390/cells10030644

Highly Species-Specific Foliar Metabolomes of Diverse Woody Species and Relationships with the Leaf Economics Spectrum
Cited by: 7
Author(s): Rabea Schweiger, Eva Castells, Luca Da Sois, Jordi Martínez‐Vilalta, Caroline Müller
Software Mentions: 6
Published: over 5 years ago

10.1186/s13059-020-1947-1

Assembly of hundreds of novel bacterial genomes from the chicken caecum
Cited by: 95
Author(s): Laura Glendinning, Robert D. Stewart, Mark J. Pallen, Kellie Watson, Mick Watson
Software Mentions: 6
Published: over 6 years ago

10.3390/metabo11050269

Influence of Extraction Solvent on Nontargeted Metabolomics Analysis of Enrichment Reactor Cultures Performing Enhanced Biological Phosphorus Removal (EBPR)
Cited by: 4
Author(s): Nay Min Min Thaw Saw, Pipob Suwanchaikasem, Rogelio Zuniga-Montanez, Guanglei Qiu, Ezequiel M. Marzinelli, Stefan Wuertz, Rohan B.H. Williams
Software Mentions: 6
Published: about 5 years ago

10.1074/jbc.RA120.014745

Quantitative phosphoproteomic analysis reveals involvement of PD-1 in multiple T cell functions
Cited by: 14
Author(s): Anna S. Tocheva, Michael Peled, Marianne Strazza, Kieran Adam, Shalom Lerrer, Shruti Nayak, Inbar Azoulay-Alfaguter, Connor Foster, Elliot A. Philips, Benjamin G. Neel, Beatrix Ueberheide, Adam Mor
Software Mentions: 6
Published: over 5 years ago

10.1038/s41598-019-44370-5

Rensch’s rule in avian lice: contradictory allometric trends for sexual size dimorphism
Cited by: 6
Author(s): Imre Sándor Piross, Andrea Harnos, Lajos Rózsa
Software Mentions: 6
Published: about 7 years ago

10.3389/fmicb.2020.00954

Persistence of a Core Microbiome Through the Ontogeny of a Multi-Host Parasite
Cited by: 22
Author(s): Fátima Jorge, Nolwenn M. Dheilly, Robert Poulin
Software Mentions: 6
Published: about 6 years ago

10.3390/cells10061459

A Distinct Faecal Microbiota and Metabolite Profile Linked to Bowel Habits in Patients with Irritable Bowel Syndrome
Cited by: 19
Author(s): Bani Ahluwalia, Cristina Iribarren, Maria K. Magnusson, Johanna Sundin, Egbert Clevers, Otto Savolainen, Alastair B. Ross, Hans Törnblom, Magnus Simrén, Lena Öhman
Software Mentions: 6
Published: about 5 years ago

10.1371/journal.pone.0235726

Diversity of mosquitoes (Diptera: Culicidae) collected in different types of larvitraps in an Amazon rural settlement
Cited by: 8
Author(s): João Aprígio Guerra de Almeida, Heliana Christy Matos Belchior, Claudia María Ríos-Velásquez, Felipe Arley Costa Pessoa
Software Mentions: 6
Published: over 5 years ago

10.21203/rs.3.rs-509143/v1

Impact of BNT162b First Vaccination on the Immune Transcriptome of Elderly Patients Infected with the B.1.351 SARS-CoV-2 Variant
Cited by: 3
Author(s): Ludwig Knabl, Hye Kyung Lee, Manuel Wieser, Anna Mur, August Zabernigg, Simon Rauch, Matthias Böck, Jana Schumacher, Norbert Kaiser, Priscilla A. Furth, Lothar Hennighausen
Software Mentions: 6
Published: about 5 years ago

10.1371/journal.pone.0237272

Passenger-surface microbiome interactions in the subway of Mexico City
Cited by: 10
Author(s): Daniela Vargas-Robles, Carolina Gonzalez-Cedillo, Apolinar M. Hernández, Luis David Alcaraz, Mariana Peimbert
Software Mentions: 6
Published: almost 6 years ago

10.3389/fmicb.2021.724980

Appendectomy Is Associated With Alteration of Human Gut Bacterial and Fungal Communities
Cited by: 16
Author(s): Shanshan Cai, Yanyun Fan, Bangzhou Zhang, J. H. Lin, Xiaomin Yang, Yunpeng Liu, Jingjing Liu, Jianlin Ren, Hui Xu
Software Mentions: 6
Published: almost 5 years ago

10.1093/conphys/coaa046

Heat, health and hatchlings: associations of in situ nest temperatures with morphological and physiological characteristics of loggerhead sea turtle hatchlings from Florida
Cited by: 19
Author(s): Kelsey Alexandra Fleming, Justin R. Perrault, Nicole I. Stacy, Christina M. Coppenrath, Alison M. Gainsbury
Software Mentions: 6
Published: over 6 years ago

10.1002/ece3.6298

Convergent morphological responses to loss of flight in rails (Aves: Rallidae)
Cited by: 8
Author(s): Julien Gaspar, Gillian C. Gibb, Steven A. Trewick
Software Mentions: 6
Published: about 6 years ago

10.3390/cells10040921

Sex-Biased lncRNA Signature in Fetal Growth Restriction (FGR)
Cited by: 2
Author(s): Aleksandra Lipka, J Jastrzebski, Łukasz Paukszto, Karol G Makowczenko, Elżbieta Łopieńska–Biernat, Marek Gowkielewicz, Ewa Lepiarczyk, Marta Wiszpolska, Mariusz Majewski, Marta Majewska
Software Mentions: 6
Published: about 5 years ago

10.1186/s13229-019-0263-7

A multifaceted approach for analyzing complex phenotypic data in rodent models of autism
Cited by: 5
Author(s): Ishita Das, Marcel A. Estévez, Anjali A. Sarkar, Sharmila Banerjee-Basu
Software Mentions: 6
Published: over 7 years ago

10.3390/biology10060502

Characterization of Tumor-Associated Macrophages and the Immune Microenvironment in Limited-Stage Neuroendocrine-High and -Low Small Cell Lung Cancer
Cited by: 22
Author(s): Dávid Dóra, Christopher J. Rivard, Hui Yu, Shivaun Lueke Pickard, Viktória László, Tünde Harkó, Zsolt Megyesfalvi, Elek Dinya, Csongor Gerdán, Gábor Szegvári, Fred R. Hirsch, Balázs Döme, Zoltán Lohinai
Software Mentions: 6
Published: about 5 years ago

10.3389/fmicb.2018.02681

Ice Nucleation Activity and Aeolian Dispersal Success in Airborne and Aquatic Microalgae
Cited by: 36
Author(s): Sylvie V. M. Tesson, Tina Šantl-Temkiv
Software Mentions: 6
Published: over 7 years ago

10.1038/s42003-021-02057-6

Inhibition of a nutritional endosymbiont by glyphosate abolishes mutualistic benefit on cuticle synthesis in Oryzaephilus surinamensis
Cited by: 19
Author(s): Julian Simon Thilo Kiefer, Suvdanselengee Batsukh, Eugen Bauer, Bin Hirota, Benjamin Weiß, Jürgen C. Wierz, Takema Fukatsu, Martin Kaltenpoth, Tobias Engl
Software Mentions: 6
Published: about 5 years ago

10.3389/fmicb.2018.00381

The Impact of Maltitol-Sweetened Chewing Gum on the Dental Plaque Biofilm Microbiota Composition
Cited by: 16
Author(s): Bart J. F. Keijser, Tim J. van den Broek, Dagmar Else Slot, Lodewic van Twillert, Jolanda Kool, Clémentine Thabuis, Michel Ossendrijver, Fridus A. Van der Weijden, R.C. Montijn
Software Mentions: 6
Published: over 8 years ago

10.1186/s13071-016-1597-z

Host-feeding patterns of mosquito species in Germany
Cited by: 51
Author(s): Jessica Börstler, Hanna Jöst, R. Garms, Andreas Krüger, Egbert Tannich, Norbert Becker, Jonas Schmidt‐Chanasit, Renke Lühken
Software Mentions: 6
Published: about 10 years ago

10.1038/s41598-020-70703-w

Peripheral serum metabolomic profiles inform central cognitive impairment
Cited by: 21
Author(s): Jingye Wang, Runmin Wei, Guoxiang Xie, Matthias Arnold, Alexandra Kueider‐Paisley, Gregory Louie, Siamak Mahmoudian Dehkordi, Colette Blach, Rebecca Baillie, Xianlin Han, Philip L. De Jager, David A. Bennett, Rima Kaddurah‐Daouk, Jia Wang
Software Mentions: 6
Published: almost 6 years ago

10.3390/diagnostics11040623

Impact of Chronic Prostatitis on the PI-RADS Score 3: Proposal for the Addition of a Novel Binary Suffix
Cited by: 1
Author(s): Sascha Merat, Theresa Blümlein, Markus Klarhöfer, Dominik Nickel, Gad Singer, Frank G. Zöllner, Stefan O. Schoenberg, Kubik-Huch Ra, Daniel Hausmann, Lukas Hefermehl
Software Mentions: 6
Published: about 5 years ago

10.3389/fcell.2021.664843

Characterization of DNA Methylation and Screening of Epigenetic Markers in Polycystic Ovary Syndrome
Cited by: 9
Author(s): Pengbo Cao, Weihao Yang, Peijun Wang, Xihe Li, Buhe Nashun
Software Mentions: 6
Published: about 5 years ago

10.3389/fmicb.2019.02651

Field Relevant Variation in Ambient Temperature Modifies Density-Dependent Establishment of Plasmodium falciparum Gametocytes in Mosquitoes
Cited by: 12
Author(s): Ashutosh K. Pathak, Justine C. Shiau, Matthew B. Thomas, Courtney C. Murdock
Software Mentions: 6
Published: over 6 years ago

10.1371/journal.pone.0136548

Familiar Face Detection in 180ms
Cited by: 47
Author(s): Matteo Visconti di Oleggio Castello, M. Ida Gobbini
Software Mentions: 6
Published: almost 11 years ago

10.3389/fonc.2021.634841

miRNA-Based Signature Associated With Tumor Mutational Burden in Colon Adenocarcinoma
Cited by: 7
Author(s): Weijie Xue, Yixiu Wang, Yuwei Xie, Caifeng Yang, Zhiqi Gong, Chunyang Guan, Chuanliang Wei, Chunhui Zhu, Zhaojian Niu
Software Mentions: 6
Published: almost 5 years ago

10.3390/ph14070635

Probiotic Bacteria with High Alpha-Gal Content Protect Zebrafish against Mycobacteriosis
Cited by: 10
Author(s): Iván Pacheco, Sandra Díaz-Sánchez, Marinela Contreras, Margarita Villar, Alejandro Cabezas-Cruz, Christian Gortázar, José de la Fuente
Software Mentions: 6
Published: almost 5 years ago

10.3389/fphar.2019.01394

Development, Testing, Parameterization, and Calibration of a Human Physiologically Based Pharmacokinetic Model for the Plasticizer, Hexamoll® Diisononyl-Cyclohexane-1, 2-Dicarboxylate Using In Silico, In Vitro, and Human Biomonitoring Data
Cited by: 9
Author(s): Kevin McNally, Craig Sams, George Loizou
Software Mentions: 6
Published: over 6 years ago

10.1038/s41598-021-90538-3

Identification of prognostic biomarkers related to the tumor microenvironment in thyroid carcinoma
Cited by: 6
Author(s): Junwei Du, Guoquan Li, Yang-sen Li, Xinguang Qiu
Software Mentions: 6
Published: almost 5 years ago

10.3389/fcell.2021.724837

Integrative Analysis of m6A Regulator-Mediated RNA Methylation Modification Patterns and Immune Characteristics in Lupus Nephritis
Cited by: 14
Author(s): Huanhuan Zhao, Shaokang Pan, Jiayu Duan, Fengxun Liu, Guangpu Li, Dongwei Li, Zhangsuo Liu
Software Mentions: 6
Published: almost 5 years ago

10.5334/jors.166

Web Tool for Navigating and Plotting SomaLogic ADAT Files
Cited by: 19
Author(s): Foo Cheung, Giovanna Fantoni, Maria Conner, Brian Sellers, Yuri Kotliarov, Julián Candia, Katherine E. Stagliano, Angélique Biancotto
Software Mentions: 6
Published: almost 9 years ago

10.3389/fcell.2021.625212

Clinical Significance of a Novel Tumor Progression-Associated Immune Signature in Colorectal Adenocarcinoma
Cited by: 3
Author(s): Rui Mao, Fan Yang, Wei Zheng, Chang Xu, Qian Liu, Yanjun Liu, Tongtong Zhang
Software Mentions: 6
Published: over 5 years ago

10.1098/rstb.2019.0255

Dormancy dynamics and dispersal contribute to soil microbiome resilience
Cited by: 34
Author(s): Jackson W Sorensen, Ashley Shade
Software Mentions: 6
Published: over 6 years ago

10.1371/journal.pone.0237713

Isn’t high school bad enough already? Rates of gender harassment and institutional betrayal in high school and their association with trauma-related symptoms
Cited by: 9
Author(s): Monika N Lind, Alexis A. Adams-Clark, Jennifer J. Freyd
Software Mentions: 6
Published: almost 6 years ago

10.3390/ph14020115

Simulation-Based Assessment of the Impact of Non-Adherence on Endoxifen Target Attainment in Different Tamoxifen Dosing Strategies
Cited by: 4
Author(s): Anna Mueller‐Schoell, Lena Klopp‐Schulze, Robin Michelet, Madelé van Dyk, Thomas E. Mürdter, Matthias Schwab, Markus Joerger, Wilhelm Huisinga, Gerd Mikus, Charlotte Kloft
Software Mentions: 6
Published: over 5 years ago

10.3389/fonc.2021.630706

The Immune-Related Gene HCST as a Novel Biomarker for the Diagnosis and Prognosis of Clear Cell Renal Cell Carcinoma
Cited by: 5
Author(s): Yongying Zhou, Xiao Wang, Weibing Zhang, Huiyong Liu, Daoquan Liu, Ping Chen, Dongmei Xu, Jianmin Liu, Yan Li, Guang Zeng, Mingzhou Li, Zhonghua Wu, Yingao Zhang, Xinghuan Wang, Michael E. DiSanto, Xinhua Zhang
Software Mentions: 6
Published: about 5 years ago

10.3389/fonc.2021.614531

Identification and Validation of Hub Genes Associated With Hepatocellular Carcinoma Via Integrated Bioinformatics Analysis
Cited by: 8
Author(s): Sumei Wang, Zuoli Song, Bing Teng, Jinjuan Zhang, Jiandong Zhang, Shuye Liu
Software Mentions: 6
Published: almost 5 years ago

10.1038/s41598-020-69268-5

Molecular malaria surveillance using a novel protocol for extraction and analysis of nucleic acids retained on used rapid diagnostic tests
Cited by: 8
Author(s): Etienne A Guirou, Tobias Schindler, Salome Hosch, Olivier Trésor Donfack, Charlene Aya Yoboue, Silvan Krähenbühl, Anna Deal, Glenda Cosi, Linda Gondwe, Grace Mwangoka, Heavenlight Masuki, Nahya Salim, Maxmillian Mpina, Said Jongo, Salim Abdulla, Stephen L. Hoffman, Bonifacio Manguire Nlavo, Carl D. Maas, Carlos Cortes Falla, Wonder P. Phiri, Guillermo A. García, Marcel Tanner, Claudia Daubenberger
Software Mentions: 6
Published: almost 6 years ago

10.3389/fimmu.2021.688493

Cohesin Core Complex Gene Dosage Contributes to Germinal Center Derived Lymphoma Phenotypes and Outcomes
Cited by: 4
Author(s): Martín A. Rivas, Ceyda Durmaz, Andreas Kloetgen, Cristopher R Chin, Zhengming Chen, Bhavneet Bhinder, Amnon Koren, Aaron D. Viny, Christopher D. Scharer, Jeremy M. Boss, Olivier Elemento, Christopher E. Mason, Ari Melnick
Software Mentions: 6
Published: almost 5 years ago

10.1007/s40037-018-0438-5

#MedEd: exploring the relationship between altmetrics and traditional measures of dissemination in health professions education
Cited by: 38
Author(s): Lauren A. Maggio, Todd C. Leroux, Holly Meyer, Anthony R. Artino
Software Mentions: 6
Published: about 8 years ago

10.1093/beheco/ary012

Social interactions predict genetic diversification: an experimental manipulation in shorebirds
Cited by: 4
Author(s): Charles Cunningham, Jorge Parra, Lucy Coals, Lucila Marcela Beltrán-Tolosa, Sama Zefania, Tamás Székely
Software Mentions: 6
Published: over 8 years ago

10.1101/2021.05.11.21256862

Impact of BNT162b first vaccination on the immune transcriptome of elderly patients infected with the B.1.351 SARS-CoV-2 variant
Cited by: 2
Author(s): Ludwig Knabl, Hye Kyung Lee, Manuel Wieser, Anna Mur, August Zabernigg, Simon Rauch, Matthias Böck, Jana Schumacher, Norbert Kaiser, Priscilla A. Furth, Lothar Hennighausen
Software Mentions: 6
Published: about 5 years ago

10.1038/s41598-020-67842-5

Molecular dissection of CRC primary tumors and their matched liver metastases reveals critical role of immune microenvironment, EMT and angiogenesis in cancer metastasis
Cited by: 18
Author(s): Jiangang Liu, Yong Beom Cho, Hye Kyung Hong, Song Wu, Philip J. Ebert, Steven M. Bray, Suei Nee Wong, Jason C. Ting, John N. Calley, Catherine F. Whittington, Shripad V. Bhagwat, Christoph Reinhard, Robert A. Wild, Do‐Hyun Nam, Amit Aggarwal, Woo Yong Lee, Sheng-Bin Peng
Software Mentions: 6
Published: almost 6 years ago

10.3390/biology10080734

Genetic Diversity and Population Differentiation of Kashgarian Loach (Triplophysa yarkandensis) in Xinjiang Tarim River Basin
Cited by: 4
Author(s): Xiaoyun Zhou, Shaokui Yi, Wenhao Zhao, Qiong Zhou, Jianzhong Shen, Dapeng Li, Bin Huo, Rong Tang
Software Mentions: 6
Published: almost 5 years ago

10.21203/rs.3.rs-80404/v1

Acute SARS-CoV-2 Infection is Highly Cytopathic, Elicits a Robust Innate Immune Response and is Efficiently Prevented by EIDD-2801
Cited by: 10
Author(s): Angela Wahl, Lisa E. Gralinski, Claire Johnson, Wenbo Yao, Martina Kovářová, Kenneth H. Dinnon, Hongwei Liu, Victoria J. Madden, Halina M. Krzystek, Chandrav De, Kristen White, Alexandra Schäfer, Tanzila Zaman, Sarah R. Leist, P. Grant, Kendra L. Gully, Frederic B. Askin, Edward P. Browne, Corbin D. Jones, Raymond J. Pickles, Ralph S. Baric, Javier García
Software Mentions: 6
Published: over 5 years ago

10.1093/conphys/coaa001

Stoichiometric and stable isotope ratios of wild lizards in an urban landscape vary with reproduction, physiology, space and time
Cited by: 7
Author(s): Andrew M. Durso, Geoffrey D. Smith, Spencer B. Hudson, Susannah S. French
Software Mentions: 6
Published: over 6 years ago

10.21203/rs.3.rs-69657/v1

Immune transcriptomes of highly exposed SARS-CoV-2 asymptomatic seropositive versus seronegative individuals from the Ischgl community
Cited by: 0
Author(s): Hye Kyung Lee, Ludwig Knabl, Lisa Pipperger, André Volland, Priscilla A. Furth, Keunsoo Kang, Harold E. Smith, Romuald Bellmann, Christina Bernhard, Norbert Kaiser, Hannes Gänzer, Mathias Ströhle, Andreas Walser, Dorothee von Laer, Lothar Hennighausen
Software Mentions: 6
Published: over 5 years ago

10.3390/cells9071571

Boosting the Intra-Articular Efficacy of Low Dose Corticosteroid through a Biopolymeric Matrix: An In Vivo Model of Osteoarthritis
Cited by: 12
Author(s): Matilde Tschon, Francesca Salamanna, Lúcia Martini, G. Giavaresi, Luca Lorenzini, Laura Calzà, Milena Fini
Software Mentions: 6
Published: almost 6 years ago

10.3390/plants10071460

Novel Metrics to Characterize In Vitro Pollen Tube Growth Performance of Apple Cultivars
Cited by: 1
Author(s): Stefan Roeder, Sara Serra, Stefano Musacchi
Software Mentions: 6
Published: almost 5 years ago

10.3389/fvets.2021.652015

Rein Tension Signals Elicit Different Behavioral Responses When Comparing Bitted Bridle and Halter
Cited by: 4
Author(s): Marie Eisersiö, Anna Byström, Jenny Yngvesson, Paolo Baragli, Antonio Lanatá, Agneta Egenvall
Software Mentions: 6
Published: about 5 years ago

10.1111/pbi.12834

Conversion of array‐based single nucleotide polymorphic markers for use in targeted genotyping by sequencing in hexaploid wheat (Triticum aestivum)
Cited by: 21
Author(s): Amanda Burridge, Paul Wilkinson, Mark Winfield, Gary Barker, Alexandra M. Allen, Jane A. Coghill, Christy Waterfall, Keith J. Edwards
Software Mentions: 6
Published: over 8 years ago

10.3390/genes12091300

Mitochondrial Genetic Heterogeneity in Leber’s Hereditary Optic Neuropathy: Original Study with Meta-Analysis
Cited by: 7
Author(s): Rajan Kumar Jha, Chhavi Dawar, Qurratulain Hasan, Akhilesh Pujar, Gaurav Gupta, Venugopalan Y Vishnu, Ramesh Kekunnaya, Kumarasamy Thangaraj
Software Mentions: 6
Published: almost 5 years ago

10.1371/journal.pntd.0009633

Identification of potential biomarkers in dengue via integrated bioinformatic analysis
Cited by: 5
Author(s): Lisha Xie, Xin Yin, Jie Bi, Hongyu Luo, Xun‐Jie Cao, Yu-Wen Ma, Ye-Ling Liu, Jianwen Su, Geng-Ling Lin, Xu‐Guang Guo
Software Mentions: 6
Published: almost 5 years ago

10.3389/fcell.2020.570107

Characterization of DNA Methylation Patterns and Mining of Epigenetic Markers During Genomic Reprogramming in SCNT Embryos
Cited by: 8
Author(s): Pengbo Cao, Hanshuang Li, Yongchun Zuo, Buhe Nashun
Software Mentions: 6
Published: almost 6 years ago

10.1111/pce.13188

Global spatial analysis of Arabidopsis natural variants implicates 5′UTR splicing ofLATE ELONGATED HYPOCOTYLin responses to temperature
Cited by: 11
Author(s): Allan B. James, Stuart Sullivan, Hugh G. Nimmo
Software Mentions: 6
Published: about 8 years ago

10.1038/s41396-021-00895-0

Resolving cryptic species complexes in marine protists: phylogenetic haplotype networks meet global DNA metabarcoding datasets
Cited by: 22
Author(s): Danièle De Luca, Roberta Piredda, Diana Sarno, Wiebe H. C. F. Kooistra
Software Mentions: 6
Published: over 5 years ago

10.1038/s41598-018-33944-4

Case studies on potential G-quadruplex-forming sequences from the bacterial orders Deinococcales and Thermales derived from a survey of published genomes
Cited by: 32
Author(s): Yun Ding, Aaron M. Fleming, Cynthia J. Burrows
Software Mentions: 6
Published: over 7 years ago

10.7717/peerj.4402

Comparative genomic analysis of a new tellurite-resistantPsychrobacterstrain isolated from the Antarctic Peninsula
Cited by: 19
Author(s): Claudia Muñoz-Villagrán, Katterinne N. Mendez, Fabián A. Cornejo, Maximiliano Figueroa, Agustina Undabarrena, Eduardo Morales, Mauricio Arenas-Salinas, Felipe Arenas, Eduardo Castro-Nallar, Claudio C. Vásquez
Software Mentions: 6
Published: over 8 years ago

10.1007/s10710-018-9328-1

Visualising the global structure of search landscapes: genetic improvement as a case study
Cited by: 12
Author(s): Nadarajen Veerapen, Gabriela Ochoa
Software Mentions: 6
Published: almost 8 years ago

10.3389/fgene.2021.657658

Weighted Gene Co-expression Network Analysis Identified a Novel Thirteen-Gene Signature Associated With Progression, Prognosis, and Immune Microenvironment of Colon Adenocarcinoma Patients
Cited by: 2
Author(s): Cangang Zhang, Zhe Zhao, Haibo Li, Shukun Yao, Dongyan Zhao
Software Mentions: 6
Published: almost 5 years ago

10.1371/journal.pone.0215192

Circulating Th17.1 cells as candidate for the prediction of therapeutic response to abatacept in patients with rheumatoid arthritis: An exploratory research
Cited by: 17
Author(s): Shinji Maeda, Satoshi Osaga, Tomoyo Maeda, Norihisa Takeda, Shinya Tamechika, Taio Naniwa, Akio Niimi
Software Mentions: 6
Published: over 6 years ago

10.3389/fgene.2021.675260

Aluminum or Low pH – Which Is the Bigger Enemy of Barley? Transcriptome Analysis of Barley Root Meristem Under Al and Low pH Stress
Cited by: 16
Author(s): Miriam Szurman-Zubrzycka, Karolina Chwiałkowska, Magdalena Niemira, Mirosław Kwaśniewski, M. Nawrot, Monika Gajecka, Paul B. Larsen, Iwona Szarejko
Software Mentions: 6
Published: about 5 years ago

10.3389/fcell.2021.622021

Identification of Potential ceRNA Network and Patterns of Immune Cell Infiltration in Systemic Sclerosis-Associated Interstitial Lung Disease
Cited by: 6
Author(s): Qiuhong Wu, Yang Liu, Yan Xie, Shixiong Wei, Yi Liu
Software Mentions: 6
Published: about 5 years ago

10.1186/gm509

Comparison of methods to identify aberrant expression patterns in individual patients: augmenting our toolkit for precision medicine
Cited by: 5
Author(s): Daniel Bottomly, Peter Ryabinin, Jeffrey W. Tyner, Bill H. Chang, Marc Loriaux, Brian J. Druker, Shannon K. McWeeney, Beth Wilmot
Software Mentions: 6
Published: over 13 years ago

10.1242/dev.199604

The combined action of Esrrb and Nr5a2 is essential for murine naïve pluripotency
Cited by: 16
Author(s): Nicola Festuccia, Nick Owens, Almira Chervova, Agnès Dubois, Pablo Navarro
Software Mentions: 6
Published: almost 5 years ago

10.1371/journal.pone.0238527

Multiple decrement life tables of Cephus cinctus Norton (Hymenoptera: Cephidae) across a set of barley cultivars: The importance of plant defense versus cannibalism
Cited by: 3
Author(s): Buddhi B Achhami, Robert K. D. Peterson, Jamie Sherman, Gadi V. P. Reddy, David K. Weaver
Software Mentions: 6
Published: almost 6 years ago

10.1002/pld3.284

Maize brace roots provide stalk anchorage
Cited by: 21
Author(s): Jonathan W Reneau, Rajdeep S. Khangura, Adam Stager, Lindsay Erndwein, Teclemariam Weldekidan, Douglas D. Cook, Brian P. Dilkes, Erin E. Sparks
Software Mentions: 6
Published: over 5 years ago

10.1002/pld3.41

High‐fidelity detection of crop biomass quantitative trait loci from low‐cost imaging in the field
Cited by: 11
Author(s): Darshi Banan, Rachel Paul, Max Feldman, Mark W. Holmes, Hannah Schlake, Ivan Baxter, Hui Jiang, Andrew D. B. Leakey
Software Mentions: 6
Published: over 8 years ago

10.1007/s00436-020-06666-8

Research paper on abiotic factors and their influence on Ixodes ricinus activity—observations over a two-year period at several tick collection sites in Germany
Cited by: 14
Author(s): Jörn Gethmann, Bernd Hoffmann, Elisa Kasbohm, Jochen Süß, Birgit Habedank, Franz Josef Conraths, Martin Beer, Christine Klaus
Software Mentions: 6
Published: about 6 years ago

10.1038/s41598-021-95648-6

Four consecutive yearly point-prevalence studies in Wales indicate lack of improvement in sepsis care on the wards
Cited by: 1
Author(s): Maja Kopczynska, Harry Unwin, Richard Pugh, Ben Sharif, Thomas Chandy, Daniel Davies, Matthew E. Shield, David Purchase, Samuel C. Tilley, Arwel T Poacher, Lewis Oliva, Sam Willis, Isabelle Ray, John Ng C. Hui, Bethany Payne, Eilis Frances Wardle, Fiona Andrew, Hei Man Priscilla Chan, Jack Barrington, Jay Hale, Joanna Hawkins, Jess K. Nicholas, Lara E. Wirt, Lowri Hughes Thomas, Megan Walker, Myat P. Pan, Tallulah Ray, Umair Asim, Victoria Maidman, Zeid Atiyah, Zain M. Nasser, Zhao Xuan Tan, Laura Tan, Tamás Szakmány
Software Mentions: 6
Published: almost 5 years ago

10.1186/s13073-016-0322-z

B-cell repertoire dynamics after sequential hepatitis B vaccination and evidence for cross-reactive B-cell activation
Cited by: 55
Author(s): Jacob D. Galson, Johannes Trück, Elizabeth A. Clutterbuck, Anna Fowler, Vincenzo Cerundolo, Andrew J. Pollard, Gerton Lunter, Dominic F. Kelly
Software Mentions: 6
Published: about 10 years ago

10.3390/pathogens9121057

Differential Mortality and High Viral Load in Naive Pacific Oyster Families Exposed to OsHV-1 Suggests Tolerance Rather than Resistance to Infection
Cited by: 7
Author(s): M. Victoria Agnew, Carolyn S. Friedman, C. Langdon, Konstantin Divilov, Blaine Schoolfield, Benjamín Morga, Lionel Dégremont, Arun K. Dhar, Peter D. Kirkland, Brett R. Dumbauld, Colleen A. Burge
Software Mentions: 6
Published: over 5 years ago

10.18632/oncotarget.10962

Epigenetic reprogramming and aberrant expression of PRAME are associated with increased metastatic risk in Class 1 and Class 2 uveal melanomas
Cited by: 85
Author(s): Matthew G. Field, Michael A. Durante, Christina L. Decatur, Berçin Tarlan, Kristen M. Oelschlager, John F. Stone, Jeffim N. Kuznetsov, Anne M. Bowcock, Stefan Kurtenbach, J. William Harbour
Software Mentions: 6
Published: almost 10 years ago

10.3389/fmicb.2021.617949

Compositional Data Analysis of Periodontal Disease Microbial Communities
Cited by: 9
Author(s): Laura Sisk-Hackworth, Adrian Ortiz-Velez, Micheal Reed, Scott T. Kelley
Software Mentions: 6
Published: about 5 years ago

10.3389/fmicb.2019.00164

Comparison of Small Gut and Whole Gut Microbiota of First-Degree Relatives With Adult Celiac Disease Patients and Controls
Cited by: 66
Author(s): Rahul Bodkhe, Sudarshan A. Shetty, Dhiraj Dhotre, Anil K. Verma, Khushbo Bhatia, Abhishek Mishra, Gurvinder Kaur, Pranav Pande, Dhinoth Kumar Bangarusamy, Beena P. Santosh, Rajadurai Chinnasamy Perumal, Vineet Ahuja, Yogesh S. Shouche, Govind Makharia
Software Mentions: 6
Published: over 7 years ago

10.3389/fphys.2018.01767

Fractal and Multifractal Properties of Electrographic Recordings of Human Brain Activity: Toward Its Use as a Signal Feature for Machine Learning in Clinical Applications
Cited by: 29
Author(s): Lucas Gabriel Souza França, José García Vivas Miranda, Marco Leite, Niraj Sharma, Matthew C. Walker, Louis Lemieux, Yujiang Wang
Software Mentions: 6
Published: over 7 years ago

10.3389/fvets.2020.594825

Slightly and Moderately Lame Cows in Tie Stalls Behave Differently From Non-lame Controls. A Matched Case-Control Study
Cited by: 1
Author(s): Johanna Karin Bernhard, Beatriz Vidondo, Rahel Lisa Achermann, Rahel Rediger, Dimitri Stucki, Kerstin Müller, Adrian Steiner
Software Mentions: 6
Published: over 5 years ago

10.3389/fvets.2021.617900

Comparative Study of Free-Roaming Domestic Dog Management and Roaming Behavior Across Four Countries: Chad, Guatemala, Indonesia, and Uganda
Cited by: 18
Author(s): Charlotte Warembourg, Ewaldus Wera, Terence Odoch, Petrus Malo Bulu, Mónica Berger-González, Danilo Álvarez, Mahamat Fayiz Abakar, Filipe Maximiano Sousa, Laura Cunha Silva, Grace Alobo, Valentin Dingamnayal Bal, Alexis Leonel López Hernandez, Enos Madaye, Maria Satri Meo, Abakar Naminou, Pablo Roquel, Sonja Hartnack, Salome Dürr
Software Mentions: 6
Published: over 5 years ago

10.1038/s41597-019-0172-9

Bacterial succession along a sediment porewater gradient at Lake Neusiedl in Austria
Cited by: 20
Author(s): Avril Jean Elisabeth von Hoyningen-Huene, Dominik Schneider, Dario Fussmann, Andreas Reimer, Gernot Arp, Rolf Daniel
Software Mentions: 6
Published: almost 7 years ago

10.3389/fonc.2019.01509

Screening the Cancer Genome Atlas Database for Genes of Prognostic Value in Acute Myeloid Leukemia
Cited by: 16
Author(s): Jie Ni, Yang Wu, Feng Qi, Xiao Li, Shengwen Yu, Siwen Liu, Jifeng Feng, Yuxiao Zheng
Software Mentions: 6
Published: over 6 years ago

10.1111/tpj.14184

An updated gene atlas for maize reveals organ‐specific and stress‐induced genes
Cited by: 91
Author(s): Genevieve M. Hoopes, John Hamilton, Joshua C. Wood, Eddi Esteban, Asher Pasha, Brieanne Vaillancourt, Nicholas J. Provart, C. Robin Buell
Software Mentions: 6
Published: over 7 years ago

10.1186/s12983-021-00410-3

Hanging by a thread: unusual nocturnal resting behaviour in a jumping spider
Cited by: 4
Author(s): Daniela C. Rößler, Massimo De Agrò, Elia Biundo, Paul S. Shamble
Software Mentions: 6
Published: about 5 years ago

10.1093/molbev/msz214

The Genetic Background Modulates the Evolution of Fluoroquinolone-Resistance in Mycobacterium tuberculosis
Cited by: 29
Author(s): Rhastin A D Castro, Amanda Ross, Lujeko Kamwela, Miriam Reinhard, Chloé Loiseau, Julia Feldmann, Sònia Borrell, Andrej Trauner, Sébastien Gagneux
Software Mentions: 6
Published: almost 7 years ago

10.7717/peerj.2740

Harvest year effects on Apulian EVOOs evaluated by1H NMR based metabolomics
Cited by: 18
Author(s): Chiara Roberta Girelli, Laura Del Coco, Paride Papadia, Sandra Angelica De Pascali, Francesco Paolo Fanizzi
Software Mentions: 6
Published: over 9 years ago

10.1186/s13007-021-00734-5

Association of spectroscopically determined leaf nutrition related traits and breeding selection in Sassafras tzumu
Cited by: 1
Author(s): Jun Liu, Yang Sun, Wenjian Liu, Zifeng Tan, Jingmin Jiang, Yanjie Li
Software Mentions: 6
Published: about 5 years ago

10.3389/fonc.2021.639085

Risk Models for Advanced Melanoma Patients Under Anti-PD-1 Monotherapy—Ad hoc Analyses of Pooled Data From Two Clinical Trials
Cited by: 5
Author(s): Xue Bai, Jie Dai, Caili Li, Chuanliang Cui, Lili Mao, Xiaoting Wei, Xinan Sheng, Zhihong Chen, Xieqiao Yan, Bixia Tang, Bin Lian, Xuan Wang, Li Zhou, Siming Li, Yan Kong, Zhonghui Qi, Huayan Xu, Rong Duan, Jun Guo, Lu Si
Software Mentions: 6
Published: about 5 years ago

10.1128/mSystems.00385-21

Diverse Viruses Carrying Genes for Microbial Extremotolerance in the Atacama Desert Hyperarid Soil
Cited by: 22
Author(s): Yunha Hwang, Janina Rahlff, Dirk Schulze‐Makuch, Michael Schloter, Alexander J. Probst
Software Mentions: 6
Published: almost 5 years ago

10.1186/s13059-019-1908-8

Host-associated microbiomes are predicted by immune system complexity and climate
Cited by: 45
Author(s): Douglas C. Woodhams, Molly C. Bletz, C. Guilherme Becker, Hayden A. Bender, Daniel Buitrago-Rosas, Hannah Diebboll, Roger Huynh, Patrick J. Kearns, Jordan G. Kueneman, Emmi Kurosawa, Brandon LaBumbard, Casandra Lyons, Kerry McNally, Klaus Schliep, Nachiket Shankar, Amanda G. Tokash-Peters, Miguel Vences, Ross Whetstone
Software Mentions: 6
Published: over 6 years ago

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