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Projects: cran: ggplot2

https://packages.ecosyste.ms/registries/cran.r-project.org/packages/ggplot2

Create Elegant Data Visualisations Using the Grammar of Graphics
48 versions
Latest release: over 2 years ago
4,921 dependent packages
2,865,232 downloads last month

Enhanced Analysis
Educational Contributors: wilke@austin.utexas.edu diggsb@ohsu.edu ruderman@usc.edu joran.elias@umontana.edu rjc2003@qatar-med.cornell.edu skopf@caltech.edu m.colombo@ed.ac.uk i.kosmidis@ucl.ac.uk melimore86@ufl.edu amurray@vt.edu nick.kennedy@ed.ac.uk dongzhuoer@mail.nankai.edu.cn benjamin.reisman@vanderbilt.edu briandk@umd.edu hye@ucsd.edu thiyanga.talagala@monash.edu brenstsr@miamioh.edu saladi@caltech.edu buyske@stat.rutgers.edu rjake@sas.upenn.edu mcmurdie@stanford.edu paul@stat.auckland.ac.nz claire.mcwhite@utexas.edu luke.mcguinness@bristol.ac.uk mdlama@wm.edu hjeppson@iastate.edu
Repository Activity:
Repository Owner: tidyverse (organization)
The tidyverse is a collection of R packages that share common principles and are designed to work together seamlessly
README Analysis:
Science Score: 100/100
Starting Score: 100 points
Bonuses:
  • +8 Academic maintainer emails
    1 maintainers with academic email addresses
  • +520 Educational commit emails
    26 contributors with educational email addresses
  • +18 Science terms in README
    9 scientific terms found in README
Very Likely Science (100)

Papers Mentioning ggplot2 11,441

10.1161/HYPERTENSIONAHA.121.17403
Blood Pressure Determinants of Cerebral White Matter Hyperintensities and Microstructural Injury: UK Biobank Cohort Study
Cited by: 13
Author(s): Karolina Wartolowska, Alastair Webb
Software Mentions: 8
Published: almost 5 years ago
10.1038/s41598-020-71211-7
Larval pesticide exposure impacts monarch butterfly performance
Cited by: 19
Author(s): Paola Olaya‐Arenas, Kayleigh C Hauri, Michael E. Scharf, Ian Kaplan
Software Mentions: 8
Published: almost 6 years ago
10.3389/fcell.2021.665869
Enhancing Fatty Acid Catabolism of Macrophages Within Aberrant Breast Cancer Tumor Microenvironment Can Re-establish Antitumor Function
Cited by: 4
Author(s): Yucui Gu, Xingjian Niu, Lei Yin, Yiran Wang, Yue Yang, Xudong Yang, Qingyuan Zhang, Hongfei Ji
Software Mentions: 8
Published: about 5 years ago
10.7717/peerj.8807
Evaluation of δ15N analysis to trace the origin of Diaphorina citri (Hemiptera: Liviidae) to citrus orchard fertilization management
Cited by: 1
Author(s): Francesc Gómez-Marco, Andrew Yoshimoto, W. Evan Braswell, Richard Stouthamer
Software Mentions: 8
Published: about 6 years ago
10.1007/s15010-021-01599-5
COVID-19 symptoms at hospital admission vary with age and sex: results from the ISARIC prospective multinational observational study
Cited by: 56
Author(s): Sheryl Ann Abdukahil, Ryuzo Abe, Laurent Abel, Lara Absil, Andrew Acker, Shingo Adachi, Elisabeth Hannah Adam, Diana Adrião, Kate Ainscough, Ali Ait Hssain, Younes Ait Tamlihat, Takako Akimoto, Tala Al-dabbous, Abdulrahman Al‐Fares, Eman Al Qasim, Razi Alalqam, Beatrice Alex, Kévin Alexandre, Huda Alfoudri, Kazali Enagnon Alidjnou, Jeffrey Aliudin, Clotilde Allavena, Nathalie Allou, João Melo Alves, Rita Vieira Alves, Maria João Amaral, Heidi S. M. Ammerlaan, Phoebe Ampaw, Roberto Andini, Claire Andréjak, Andrea Angheben, François Angoulvant, Séverine Ansart, Massimo Antonelli, Carlos Brito, Yaseen M. Arabi, Irene Aragão, Antonio Arcadipane, Lukas Arenz, Jean‐Benoît Arlet, Christel Arnold-Day, Lovkesh Arora, Élise Artaud-Macari, Ángel Asensio, Jean Baptiste Assié, Anika Atique, Johann Auchabie, Hugues Aumaître, Laurène Azemar, Cécile Azoulay, Benjamin Bach, Delphine Bachelet, J Kenneth Baillie, Erica Bak, Agamemnon Bakakos, Firouzé Bani‐Sadr, Renata Barbalho, William Barclay, Michaela Barnikel, Audrey Barrelet, Cleide Barrigoto, Romain Basmaci, Diego Rincón, Alexandra Bedossa, Sylvie Behilill, Aleksandr Beljantsev, David Bellemare, Anna Beltrame, Marine Beluze, Nicolas Benech, Dehbia Benkerrou, Suzanne Bennett, Luís Bento, Jan-Erik Berdal, Delphine Bergeaud, Lorenzo Bertolino, Simon Bessis, Sybille Bevilcaqua, Krishna Bhavsar, Felwa Bin Humaid, F. Bissuel, Patrick Biston, Laurent Bitker, Pablo Blanco-Schweizer, Mathieu Blot, Filomena Boccia, Debby Bogaert, François Bompart, Gareth Booth, Diogo Borges, R. Borie, Jeannet C. Bos, Hans Martin Bosse, Élisabeth Botelho-Nevers, Lila Bouadma, Olivier Bouchaud, Sabelline Bouchez, Dounia Bouhmani, D. Bouhour, Kévin Bouiller, Laurence Bouillet, Camille Bouisse, Anne Sophie Boureau, Maude Bouscambert, Jason Bouziotis, Bianca Boxma, Marielle Boyer-Besseyre, Maria Boylan, Cynthia Braga, Timo Brandenburger, Luca Brazzi, Dorothy Breen, Patrick J. Breen, Kathy Brickell, Nicolas Brozzi, Nina Buchtele, Christian Buesaquillo, Polina Bugaeva, Marielle Buisson, Erlina Burhan, Ingrid G. Bustos, Denis Butnaru, Sheila Cárcel, André Cabie, Susana Cabral, Eder Cáceres, Mia Callahan, Kate Calligy, José Andrés Calvache, João Camões, Valentine Campana, Paul Campbell, Cecilia Canepa, Mireia Cantero, P. Caraux-Paz, Filipa Cardoso, Filipe S. Cardoso, Sofia Cardoso, Simone Carelli, Nicolas Carlier, Gayle Carney, Chloe Carpenter, Marie-Christine Carret, François Martin Carrier, Gail Carson, Maire-Laure Casanova, Mariana Cascão, José Casimiro, Bailey Cassandra, Silvia Castañeda, Nidyanara Castanheira, Guylaine Castor-Alexandre, Henry Castrillón, Ivo Castro, Ana Catarino, François-Xavier Catherine, Roberta Figueiredo Cavalin, Giulio Giovanni Cavalli, Alexandros Cavayas, Adrián Ceccato, Minerva Cervantes-Gonzalez, Anissa Chair, Catherine Chakveatze, Adrienne Chan, Meera Chand, Julie Chas, Camille Chassin, Anjellica Chen, Yih‐Sharng Chen, Matthew P Cheng, Antoine Chéret, Thibault Chiarabini, Julian Chica, Catherine Chirouze, Davide Chiumello, Hwa Jin Cho, Sung Min Cho, Bernard Cholley, José Pedro Cidade, José Miguel Cisneros Herreros, Barbara Wanjiru Citarella, Anna Ciullo, Jennifer Clarke, Sara Clohisey, Cassidy Codan, Caitriona Cody, Alexandra Coelho, Gwenhaël Colin, Michael Collins, Sebastiano Maria Colombo, Pamela Combs, Jane Connelly, Marie Connor, Anne Conrad, Sofía Contreras, Graham Cooke, Mary Copland, Hugues Cordel, Amanda Corley, Sarah Cormican, Sabine Cornelis, Arianne Joy Corpuz, Grégory Corvaisier, Camille Couffignal, Sandrine Couffin‐Cadiergues, R Courtois, Charles Crepy D’Orleans, Sabine Croonen, Gloria Crowl, Jonathan Crump, Claudina Cruz, Marc Csete, Alberto Cucino, Caroline Cullen, Matthew J. Cummings, Gerard F. Curley, Elodie Curlier, Paula Custódio, Frédérick D’Aragon, Ana da Silva Filipe, Charlène Da Silveira, Éric D’Ortenzio, Al-Awwab M. Dabaliz, Andrew Dagens, Heidi J. Dalton, Jo Ann Dalton, Nick Daneman, Emmanuelle A. Dankwa, Jorge Dantas, Nathalie De Castro, Diego de Mendoza, Rafael Freitas de Oliveira França, Rosanna De Rosa, Thushan I. de Silva, Peter de Vries, David A. Dean, Marie‐Pierre Debray, William Dechert, Lauren Deconninck, Romain Decours, Isabelle Delacroix, K. Delavigne, Ionna Deligiannis, Andrea Dell’Amore, Pierre Delobel, Élisa Demonchy, Emmanuelle Denis, Dominique Deplanque, Pieter Depuydt, Mehul Desai, Diane Descamps, Mathilde Desvallée, Santi Dewayanti, Alpha Diallo, S. Diamantis, André Dias, Juan José Díaz, Rodrigo Díaz, Kévin Didier, Jean‐Luc Diehl, Willem Dieperink, Jérôme Dimet, Vincent Dinot, Alphonsine Diouf, Yael Dishon, Félix Djossou, Annemarie B Docherty, Andy Dong, Christl A. Donnelly, Maria Donnelly, Chloe Donohue, Céline Dorival, James J. Douglas, Renée A. Douma, Nathalie Dournon, Triona Downer, Mark Downing, Tom Drake, Vincent Dubée, François Dubos, Alexandra Ducancelle, Susanne Dudman, Jake Dunning, Emanuele Durante Mangoni, Silvia Duranti, Lucian A. Durham, Bertrand Dussol, Xavier Duval, Anne Margarita Dyrhol-Riise, Carla Eira, José Ernesto Vidal, Mohammed El Sanharawi, Subbarao Elapavaluru, Brigitte Elharrar, Natalie Elkheir, Jacobien Ellerbroek, Rachael Ellis, Philippine Eloy, Tarek Elshazly, Isabelle Enderle, Ilka Engelmann, Vincent Enouf, Olivier Épaulard, Mariano Esperatti, Hélène Espérou, Marina Esposito-Farèse, João Estêvão, Manuel Etienne, Manuel Etienne, Nadia Ettalhaoui, Anna Greti Everding, Mirjam Evers, Isabelle Fabre, Amna Faheem, Arabella Fahy, Cameron J Fairfield, Pedro Faria, Nataly Farshait, Arie Zainul Fatoni, Karine Faure, Mohamed Fayed, Niamh Feely, Jorge Fernandes, Marília Andreia Fernandes, S. Fernandes, Joana Ferrão, Eglantine Ferrand Devouge, Mário Ferraz, Benigno Ferreira, Ricard Ferrer, Claudia Figueiredo-Mello, C. Flateau, Tom Fletcher, Letizia Lucia Florio, Claire Foley, Victоr Fоmin, Cláudio Duarte Fonseca, Tatiana Fonseca, Patricia Fontela, Simon Forsyth, Giuseppe Foti, Erwan Fourn, Rob Fowler, Diego Franch-Llasat, Christophe Fraser, John F. Fraser, Marcela Vieira Freire, Ana Freitas Ribeiro, Caren Friedrich, Stéphane Fry, Nora Fuentes, Masahiro Fukuda, Joan Gómez-Junyent, Valérie Gaborieau, Benoît Gachet, Rostane Gaci, Massimo Gagliardi, Jean-Charles Gagnard, Amandine Gagneux‐Brunon, Sérgio Gaião, Phil Gallagher, Elena Curto, Carrol Gamble, A.R. Garan, Esteban García-Gallo, Rebekha Garcia, Denis Garot, Valérie Garrait, Nathalie Gault, Aisling Gavin, Alexandre Gaymard, Johannes Gebauer, Louis Gerbaud Morlaes, Nuno Germano, Jade Ghosn, Marco Giani, Carlo Giaquinto, Jess Gibson, Tristan Gigante, Morgane Gilg, Guillermo Giordano, Michelle Girvan, Valérie Gissot, Gezy Giwangkancana, Daniel Glikman, Petr Glybochko, Eric Gnall, Geraldine Goco, François Goehringer, Siri Goepel, Jean‐Christophe Goffard, Jonathan L. Golob, Isabelle Gorenne, Cécile Goujard, Tiphaine Goulenok, Margarite Grable, E. Wilson Grandin, Pascal Granier, Giacomo Grasselli, Christopher Green, William Greenhalf, S. Greffe, Domenico Luca Grieco, Matthew Griffee, Fiona Griffiths, Ioana Grigoraş, Albert Groenendijk, Anja Grosse Lordemann, Heidi Gruner, Yusing Gu, Jérémie Guedj, Dewi Guellec, Anne‐Marie Guerguerian, Daniela Guerreiro, Romain Guéry, Anne Guillaumot, Laurent Guilleminault, Thomas Guimard, Daniel A. Haber, Sheeba Hakak, Matthew Hall, Sophie Halpin, Ansley Hamer, Rébecca Hamidfar, Terese Hammond, Hayley Hardwick, Kristen Harley, Ewen M Harrison, Janet Harrison, Leanne Hays, Jan Heerman, Lars Heggelund, Ross Hendry, Martina Hennessy, Aquiles R. Henriquez-Trujillo, Maxime Hentzien, Jaime Hernández-Montfort, Astarini Hidayah, Dawn Higgins, Eibhilin Higgins, S. R. Hinton, Ana Hipólito-Reis, Hiroaki Hiraiwa, Julian A. Hiscox, Antonia Ho, Alexandre Hoctin, Isabelle Hoffmann, Oscar Hoiting, Rebecca Holt, Jan Cato Holter, Peter Horby, Juan Pablo Horcajada, Koji Hoshino, Kota Hoshino, Catherine L. Hough, Jimmy Ming-Yang Hsu, Jean‐Sébastien Hulot, Samreen Ijaz, Hajnal-Gabriela Illes, Hugo Inácio, Carmen Infante Dominguez, Εlias Iosifidis, Lacey Irvine, Sarah Isgett, Tiago Isidoro, Margaux Isnard, Junji Itai, Daniel Ivulich, Salma Jaafoura, Julien Jabot, Clare Jackson, Nina Jamieson, Stéphane Jauréguiberry, Jeffrey Javidfar, Zabbe Jean-Benoît, Florence Jego, Synne Jenum, Ruth Jimbo, Ruth Noemí Jorge García, C. Joseph, Mark Joseph, Philippe Jouvet, Hanna Jung, Ouifiya Kafif, Florentia Kaguelidou, Sabina Kali, Smaragdi Kalomoiri, Darshana Hewa Kandamby, Chris Kandel, Ravi Kant, Christiana Kartsonaki, Daisuke Kasugai, Kevin Katz, Simreen Kaur Johal, Seán Keating, Andrea Kelly, Sadie Kelly, Lisa Kennedy, Kalynn Kennon, Younes Kerroumi, Evelyne Kestelyn, Imrana Khalid, Antoine Khalil, Coralie Khan, Irfan Ullah Khan, Michelle E. Kho, Saye Khoo, Yuri Kida, Peter Kiiza, Anders Benjamin Kildal, Antoine Kimmoun, Detlef Kindgen‐Milles, Nobuya Kitamura, Paul Klenerman, Gry Kloumann Bekken, Stephen R Knight, Robin Kobbe, Malte Kohns Vasconcelos, Volkan Korten, Caroline Kosgei, Karolina Krawczyk, Pavan Kumar Vecham, Deepali Kumar, Ethan Kurtzman, Demetrios J Kutsogiannis, Konstantinos G Kyriakoulis, Erwan L’Her, Marie Lachâtre, Marie Lacoste, John G. Laffey, Marie Lagrange, Fabrice Lainé, Marc Lambert, François Lamontagne, Marie Langelot-Richard, Eka Yudha Lantang, Marina Lanza, Cédric Laouenan, Samira Laribi, Delphine Larivière, Odile Launay, Yoan Lavie‐Badie, Andrew Law, Clément Le Bihan, Cyril Le Bris, Eve Le Coustumier, Georges Le Falher, Sylvie Le Gac, Quentin Le Hingrat, Marion Le Maréchal, Soizic Le Mestre, Vincent Le Moing, Hervé Le Nagard, Paul Le Turnier, Rafael León, Minh Patrick Lê, Marta Leal Santos, Ema Leal, James Lee, Su Hwan Lee, Todd A. Lee, Gary Leeming, Bénédicte Lefebvre, Laurent Lefèbvre, Benjamin Lefèvre, François Lellouche, Adrien Lemaignen, Véronique Lemée, Gretchen Lemmink, Michela Leone, Quentin Lepiller, François-Xavier Lescure, Olivier Lesens, Mathieu Lesouhaitier, Claire Lévy-Marchal, Bruno Lévy, Yves Lévy, Gianluigi Li Bassi, Janet Liang, Wei Shen Lim, Bruno Lina, Andreas Lind, Guillaume Lingas, Sylvie Lion-Daolio, Keibun Liu, Antonio Loforte, Navy Lolong, Diogo Lopes, Dalia Lopez-Colón, Paul Loubet, Jean Christophe Lucet, Carlos M. Luna, Olguța Lungu, Liem Luong, Dominique Luton, Ruth Lyons, Fredrik Müller, Karl Erik Müller, Olavi Maasikas, Sarah MacDonald, Moïse Machado, Gabrielle Macheda, Juan Macías Sánchez, Jai Madhok, Rafaël Mahieu, Sophie Mahy, Lars S. Maier, Mylène Maillet, Thomas Maitre, Maximilian Malfertheiner, Nadia Malik, Fernando Maltêz, Denis Malvy, Marina Mambert, Victoria Manda, Jose M. Mandei, Edmund Manning, Aldric Manuel, Ceila Maria Sant, Ana Malaque, Flávio Marino, Carolline Araujo, Charbel Maroun Eid, Ana Marques, Catherine Marquis, Brian Marsh, Laura Marsh, Marshall John, Celina Maria Turchi Martelli, Guillaume Martin‐Blondel, Ignacio Martín‐Loeches, Alejandro Martín-Quirós, Dori-Ann Martin, Emily T. Martin, M. Martinot, Caroline Martins Rego, Ana Martins, João Martins, Gennaro Martucci, Eva Miranda Marwali, Juan Fernado Masa Jimenez, David Maslove, Sabina Mason, Moshe Matan, Daniel Mathieu, M. Mattéi, Romans Matulevics, Laurence Maulin, Natalie Mc Evoy, Aine McCarthy, Colin McCloskey, Rachael McConnochie, Sherry McDermott, Sarah E. McDonald, Samuel McElwee, Natalie McEvoy, Allison McGeer, Niki McGuinness, Kenneth A McLean, Alistair Nichol, Edel Meaney, Cécile Mear-Passard, Maggie Mechlin, Ferruccio Mele, Kusum Menon, France Mentré, Alexander J. Mentzer, Noémie Mercier, Antoine Merckx, Blake Mergler, Laura Merson, António Mesquita, Agnès Meybeck, Alison Meynert, Vanina Meyssonnier, Amina Meziane, Medhi Mezidi, Céline Michelanglei, Vladislav Mihnovitš, Hugo Miranda Maldonado, Mary C. Mone, Asma Moin, David Molina, Elena Molinos, Agostinho Monteiro, Claudia Montes, Giorgia Montrucchio, Sarah R. Moore, Shona C. Moore, Lina Morales-Cely, Lucía Moro, Diego Rolando Morocho Tutillo, Ana Motos, Hugo Mouquet, Clara Mouton Perrot, Julien Moyet, Jimmy Mullaert, Daniel Munblit, Derek Murphy, Marlène Murris, Dimitra Melia Myrodia, Yohan Nguyen, Nadège Néant, Holger Neb, Nikita A Nekliudov, Raul Neto, Emily Neumann, Bernardo Neves, Pauline Yeung Ng, Wing Yiu Ng, Orna Ní Choileáin, Alistair Nichol, Stephanie Nonas, Marion Noret, Lisa Norman, Alessandra Notari, Mahdad Noursadeghi, Karolina Nowicka, Saad Nseir, Jose I Nunez, Elsa Nyamankolly, Max R OʼDonnell, Katie O’Hearn, Conar R. O’Neil, Giovanna Occhipinti, Tawnya Ogston, Takayuki Ogura, Tak-Hyuk Oh, Shinichiro Ohshimo, Budha Charan Singh Oinam, Ana Pinho Oliveira, João Oliveira, Piero Olliaro, David S. Y. Ong, Wilna Oosthuyzen, Peter Openshaw, Claudia Milena Orozco‐Chamorro, Andrés Orquera, Javier Osatnik, Nadia Ouamara, Rachida Ouissa, Clark Owyang, E. Oziol, Diana Póvoas, Maïder Pagadoy, Justine Pages, Mario Palacios, Massimo Palmarini, Giovanna Panarello, Prasan Kumar Panda, Mauro Panigada, Nathalie Pansu, Aurélie Papadopoulos, Briseida Parra, Jérémie Pasquier, Fabian Patauner, Luís Patrão, Christelle Paul, Mical Paul, Jorge Paulos, William A. Paxton, Jean‐François Payen, India Pearse, Giles J. Peek, Florent Peelman, Nathan Peiffer-Smadja, Vincent Peigne, Mare Pejkovska, Ithan D. Peltan, Rui Pereira, Daniel Pérez, Thomas Perpoint, Antonio Artigas, Lenka Petroušová, Ventzislava Petrov–Sanchez, Gilles Peytavin, Scott Pharand, Michaël Piagnerelli, Walter Picard, Olivier Picone, Marie Piel-Julian, Carola Pierobon, Carlos Pimentel, Lionel Piroth, Riinu Pius, Simone Piva, Laurent Plantier, Daniel Plotkin, Julien Poissy, Maria Pokorska‐Śpiewak, Sergio Poli, Georgios Pollakis, Jolanta Popielska, Douwe F. Postma, Pedro Póvoa, Jeff Powis, Sofia Prapa, Christian Prebensen, Jean‐Charles Preiser, Vincent Prestre, Nicholas Price, Anton Prinssen, Mark G Pritchard, Lúcia Proença, Oriane Puéchal, Gregory Purcell, Luisa Quesada, Else Quist‐Paulsen, Mohammed Quraishi, Indrek Rätsep, Bernhard Rössler, Christian Rabaud, Marie Rafiq, Gabrielle Ragazzo, Fernando Rainieri, Nagarajan Ramakrishnan, Kollengode Ramanathan, Blandine Rammaert, C. Rapp, Menaldi Rasmin, Cornelius Rau, Stanislas Rebaudet, Sarah Redl, Brenda Reeve, Liadain Reid, Renato Barbosa Reis, Jonathan Remppis, Martine Rémy, Hanna Renk, Liliana Resende, Anne-Sophie Resseguier, Matthieu Revest, Oleksa Rewa, Luis Felipe Reyes, David Richardson, Denise Richardson, Laurent Raskine, Jordi Riera, Ana Lúcia Rios, Asgar Rishu, P Rispal, Karine Risso, María Angélica Rivera Núñez, Nicholas Rizer, André Roberto, Stephanie Roberts, David L. Robertson, Olivier Robineau, Ferrán Roche-Campo, Paola Rodari, Simão Rodeia, Julia Rodriguez Abreu, Emmanuel Roilides, Amanda Rojek, Juliette Romaru, Roberto Roncon‐Albuquerque, Mélanie Roriz, Manuel Rosa‐Calatrava, Michael Rose, Dorothea Rosenberger, Andrea Rossanese, Bénédicte Rossignol, Patrick Rossignol, Carine Roy, B. Rozé, Clark D Russell, Steffi Ryckaert, Aleksander Rygh Holten, Xavier Sánchez Choez, Isabela Saba, Musharaf Sadat, Nadia Saïdani, Leonardo Salazar, Gabriele Sales, Stéphane Sallaberry, Hélène Salvator, Ángel Sánchez-Miralles, Olivier Sanchez, Vanessa Sancho‐Shimizu, Gyan Sandhu, Oana Săndulescu, Marlene Santos, Shirley Sarfo-Mensah, Benjamine Sarton, Eglė Savičiūtė, Parthena Savvidou, Joshua Scarsbrook, Tjard Schermer, Arnaud Scherpereel, Marion Schneider, Stephan Schroll, Michael Schwameis, James Scott-Brown, Janet T. Scott, Nicholas Sédillot, Tamara Seitz, Caroline Semaille, Malcolm G Semple, Éric Senneville, Filipa Sequeira, Tânia Sequeira, Ellen Shadowitz, Mohammad Shamsah, Pratima Sharma, Catherine Shaw, Victoria Shaw, Nisreen Shiban, Nobuaki Shime, Hiroaki Shimizu, Keiki Shimizu, Sally Shrapnel, Hoi‐Ping Shum, Nassima Si Mohammed, Louise Sigfrid, Catarina Silva, Maria João Silva, Wai Ching Sin, Vegard Skogen, Sue Smith, Benjamin Smood, Michelle Smyth, Morgane Snacken, Dominic So, Monserrat Solis, Joshua Solomon, Tom Solomon, Emily C. Somers, Agnès Sommet, Myung Jin Song, Rima Song, Tae Jin Song, Michael Sonntagbauer, Edouard Soum, Maria Sousa Uva, Marta Sousa, Vicente Cés de Souza-Dantas, Alexandra Sperry, Shiranee Sriskandan, Thomas Staudinger, Stephanie-Susanne Stecher, Ymkje Stienstra, Birgitte Stiksrud, Adrian Streinu‐Cercel, Anca Streinu‐Cercel, Samantha Strudwick, Ami Stuart, D.I. Stuart, Asfia Sultana, Charlotte Summers, Magdalena Surovcová Andrey A. Svistunov, Konstantinos Syrigos, Jaques Sztajnbok, Konstanty Szułdrzyński, François Téoulé, Shirin Tabrizi, Lysa Tagherset, Ewa Talarek, Sara Taleb, Jelmer Talsma, Le Van Tan, Hiroyuki Tanaka, Taku Tanaka, Hayato Taniguchi, Coralie Tardivon, Pierre Tattevin, M Azhari Taufik, Richard S. Tedder, João M.C. Teixeira, Marie-Capucine Tellier, Pleun Terpstra, B. Terrier, Nicolas Terzi, Hubert Tessier-Grenier, Vincent Thibault, Simon-Djamel Thiberville, Benoît Thill, A. A. Roger Thompson, Shaun Thompson, David Thomson, Emma C. Thomson, Duong Bich Thuy, Ryan S. Thwaites, Peter Timashev, Jean‐François Timsit, Bharath Kumar Tirupakuzhi Vijayaraghavan, Maria Toki, Kristian Tonby, Rosario María Torres Santos-Olmo, Antoni Torres, Margarida Torres, Théo Trioux, Huynh Trung Trieu, Cécile Tromeur, Ioannis Trontzas, Jonathan P. Troost, Tiffany Trouillon, Christelle Tual, Sarah Tubiana, Helen Tuite, Lance Turtle, Paweł Twardowski, Makoto Uchiyama, Roman Ullrich, Alberto Uribe, Asad Usman, Luís Val-Flores, Stijn Van de Velde, Marcel van den Berge, M. van der Feltz, Nicky Van Der Vekens, Peter van der Voort, Sylvie van der Werf, Marlice van Dyk, Laura van Gulik, Jarne Van Hattem, Steven van Lelyveld, Carolien van Netten, Noémie Vanel, Henk Vanoverschelde, Charline Vauchy, Aurélie Veislinger, Jorge Velazco, Sara Ventura, Annelies Verbon, César Vieira, Joy Ann Villanueva, J. Pablo Sáez Villar, Pierre-Marc Villeneuve, Andrea Villoldo, Nguyễn Văn Vĩnh Châu, Benoît Visseaux, Hannah Visser, Aapeli Vuorinen, Fanny Vuotto, Chih‐Hsien Wang, Jia Wei, Katharina Weil, Sanne Wesselius, Murray Wham, Bryan Whelan, Nicole White, Aurélie Wiedemann, Keith Wille, Evert‐Jan Wils, Ioannis Xynogalas, Jacky Y. Suen, Sophie Yacoub, Masaki Yamazaki, Yazdan Yazdanpanah, Cécile Yelnik, Stephanie T. Yerkovich, Toshiki Yokoyama, Hodane Yonis, P. L. Young, Saptadi Yuliarto, Marion Zabbe, Kai Zacharowski, Maram Zahran, Maria Zambon, Alberto Zanella, Konrad Zawadka, Hiba Zayyad, Alexander Zoufaly, David Zucman
Software Mentions: 8
Published: almost 5 years ago
10.3389/fcvm.2020.586871
Predicting Diagnostic Gene Biomarkers Associated With Immune Infiltration in Patients With Acute Myocardial Infarction
Cited by: 64
Author(s): Enfa Zhao, Hang Xie, Yushun Zhang
Software Mentions: 8
Published: over 5 years ago
10.1128/mSystems.01356-20
Spinal Cord Injury Changes the Structure and Functional Potential of Gut Bacterial and Viral Communities
Cited by: 26
Author(s): Jingjie Du, Ahmed A. Zayed, Kristina A. Kigerl, Kylie Zane, Matthew B. Sullivan, Phillip G. Popovich
Software Mentions: 8
Published: almost 5 years ago
10.1007/s12031-020-01787-2
Studying Autism Using Untargeted Metabolomics in Newborn Screening Samples
Cited by: 13
Author(s): Julie Courraud, Madeleine Ernst, Susan Svane Laursen, David M. Hougaard, Arieh Cohen
Software Mentions: 8
Published: over 5 years ago
10.3389/fcvm.2020.575275
Reactivation of Atrium Genes Is a Primer for Heart Infarction or Regeneration
Cited by: 1
Author(s): Yang Zhen
Software Mentions: 8
Published: over 5 years ago
10.1093/cercor/bhaa348
The Functional Foundations of Episodic Memory Remain Stable Throughout the Lifespan
Cited by: 3
Author(s): Didac Vidal‐Piñeiro, Markus Handal Sneve, Inge K. Amlien, Håkon Grydeland, Athanasia M. Mowinckel, James M Roe, Øystein Sørensen, Lars Nyberg, Kristine B. Walhovd, Anders M. Fjell
Software Mentions: 8
Published: over 5 years ago
10.1186/s12859-021-04123-6
The prognostic value of an autophagy-related lncRNA signature in hepatocellular carcinoma
Cited by: 19
Author(s): Shiming Yang, Yaping Zhou, Xiangxin Zhang, Lu Wang, Jianfeng Fu, Xiaotong Zhao, Yang Liu
Software Mentions: 8
Published: about 5 years ago
10.1017/S1368980019003239
Four decades of socio-economic inequality and secular change in the physical growth of Guatemalans
Cited by: 14
Author(s): Liina Mansukoski, William Johnson, Katherine Brooke‐Wavell, J. Andres Galvez-Sobral, L.R. Furlan, Tim J. Cole, Barry Bogin
Software Mentions: 8
Published: over 6 years ago
10.1371/journal.pone.0255708
Identification of key genes and immune infiltration modulated by CPAP in obstructive sleep apnea by integrated bioinformatics analysis
Cited by: 3
Author(s): Cheng Fan, Sisi Huang, Chunhua Xiang, Tianhui An, Yi Song
Software Mentions: 8
Published: over 4 years ago
10.1186/s40168-019-0630-9
Environmental filtering drives distinct continental atlases of soil archaea between dryland and wetland agricultural ecosystems
Cited by: 103
Author(s): Shuo Jiao, Ye Xu, Jie Zhang, Yahai Lu
Software Mentions: 8
Published: over 7 years ago
10.3389/fonc.2021.597447
A Dynamic Transcription Factor Signature Along the Colorectal Adenoma-Carcinoma Sequence in Patients With Co-Occurrent Adenoma and Carcinoma
Cited by: 3
Author(s): Zongfu Pan, Ying He, Wei Zhu, Tao Xu, Xiaoping Hu, Ping Huang
Software Mentions: 8
Published: about 5 years ago
10.1186/s13059-020-02195-w
Functional and genetic markers of niche partitioning among enigmatic members of the human oral microbiome
Cited by: 107
Author(s): Alon Shaiber, Amy Willis, Tom O. Delmont, Simon Roux, Lin-Xing Chen, Abigail C. Schmid, Mahmoud Yousef, Andrea R. Watson, Karen Lolans, Özcan C. Esen, Sonny T. M. Lee, Nora Downey, Hilary G. Morrison, Floyd E. Dewhirst, Jessica L. Mark Welch, A. Murat Eren
Software Mentions: 8
Published: over 5 years ago
10.1098/rspb.2020.1158
Parasite infection disrupts escape behaviours in fish shoals
Cited by: 3
Author(s): Nicolle Demandt, Marit Praetz, Ralf H. J. M. Kurvers, Jens Krause, Joachim Kurtz, Jörn P. Scharsack
Software Mentions: 8
Published: over 5 years ago
10.3758/s13428-019-01236-y
formr: A study framework allowing for automated feedback generation and complex longitudinal experience-sampling studies using R
Cited by: 120
Author(s): Rana Arslan, Matthias P. Walther, Cyril Tata
Software Mentions: 8
Published: about 7 years ago
10.1098/rspb.2017.0905
The evolution of dual meat and milk cattle husbandry in Linearbandkeramik societies
Cited by: 43
Author(s): Rosalind Gillis, Lenka Kovačíková, Stéphanie Bréhard, Émilie Guthmann, Ivana Vostrovská, Hana Nohálová, Rose‐Marie Arbogast, László Domboróczki, Joachim Pechtl, Alexander Anders, Arkadiusz Marciniak, Anne Tresset, Jean‐Denis Vigne
Software Mentions: 8
Published: almost 9 years ago
10.1371/journal.ppat.1009933
Trypanosoma brucei triggers a broad immune response in the adipose tissue
Cited by: 11
Author(s): Henrique Machado, Tiago Bizarra-Rebelo, Mariana Sequeira, Sandra Trindade, Tãnia Carvalho, Filipa Rijo‐Ferreira, Barbara Rentroia‐Pacheco, Karine Serre, Luísa M. Figueiredo
Software Mentions: 8
Published: over 4 years ago
10.1007/s00300-021-02823-6
Seasonal dynamics of meroplankton in a sub-Antarctic fjord (Southern Patagonia, Chile)
Cited by: 1
Author(s): Santiago E A Pineda-Metz, Américo Montiel
Software Mentions: 8
Published: about 5 years ago
10.1136/bmjopen-2020-040132
Prediction of perinatal death using machine learning models: a birth registry-based cohort study in northern Tanzania
Cited by: 27
Author(s): Innocent B. Mboya, Michael Johnson Mahande, Mohanad Mohammed, Joseph Obure, Henry Mwambi
Software Mentions: 8
Published: over 5 years ago
10.1186/s12859-016-1051-4
gtrellis: an R/Bioconductor package for making genome-level Trellis graphics
Cited by: 17
Author(s): Zuguang Gu, Roland Eils, Matthias Schlesner
Software Mentions: 8
Published: about 10 years ago
10.3389/fonc.2021.665360
DDX60 Is Associated With Glioma Malignancy and Serves as a Potential Immunotherapy Biomarker
Cited by: 7
Author(s): Jingwen Zhang, Minjie Fu, Mengli Zhang, Jinsen Zhang, Zunguo Du, Hongyi Zhang, Wei Hua, Ying Mao
Software Mentions: 8
Published: almost 5 years ago
10.1186/s12859-020-3389-x
ushr: Understanding suppression of HIV in R
Cited by: 3
Author(s): Sinead E. Morris, Luise Dziobek-Garrett, Andrew J. Yates
Software Mentions: 8
Published: over 6 years ago
10.1186/s42523-021-00096-2
Salmon gut microbiota correlates with disease infection status: potential for monitoring health in farmed animals
Cited by: 65
Author(s): Davide Bozzi, Jacob Agerbo Rasmussen, Christian Carøe, Harald Sveier, Kristian Nordøy, M. Thomas P. Gilbert, Morten T. Limborg
Software Mentions: 8
Published: about 5 years ago
10.1371/journal.pone.0100570
LADES: A Software for Constructing and Analyzing Longitudinal Designs in Biomedical Research
Cited by: 0
Author(s): Alan Vázquez-Alcocer, Daniel Ladislao Garzón-Cortes, Rosa Sánchez‐Casas
Software Mentions: 8
Published: almost 12 years ago
10.1186/s12859-021-04130-7
Correlation AnalyzeR: functional predictions from gene co-expression correlations
Cited by: 35
Author(s): Henry E. Miller, Alexander J.R. Bishop
Software Mentions: 8
Published: about 5 years ago
10.1186/s12864-020-6534-z
Genome-wide discovery, and computational and transcriptional characterization of an AIG gene family in the freshwater snail Biomphalaria glabrata, a vector for Schistosoma mansoni
Cited by: 17
Author(s): Lijun Lu, Eric S. Loker, Si-Ming Zhang, Sarah Kay Buddenborg, Lijing Bu
Software Mentions: 8
Published: over 6 years ago
10.1186/s12859-021-04009-7
SLIDR and SLOPPR: flexible identification of spliced leader trans-splicing and prediction of eukaryotic operons from RNA-Seq data
Cited by: 7
Author(s): Marius Wenzel, Berndt Müller, Jonathan Pettitt
Software Mentions: 8
Published: about 5 years ago
10.1093/dnares/dsaa017
A specific combination of dual index adaptors decreases the sensitivity of amplicon sequencing with the Illumina platform
Cited by: 0
Author(s): Yuu Hirose, Takuhei Shiozaki, Itsuki Hamano, Shizue Yoshihara, Hayato Tokumoto, Toshihiko Eki, Naomi Harada
Software Mentions: 8
Published: almost 6 years ago
10.1186/s42523-021-00111-6
Characterization of the gut microbiome in wild rocky mountainsnails (Oreohelix strigosa)
Cited by: 2
Author(s): Bridget Chalifour, Jingchun Li
Software Mentions: 8
Published: almost 5 years ago
10.1186/s12889-021-10979-3
Associations of meeting 24-h movement guidelines with stress and self-rated health among adults: is meeting more guidelines associated with greater benefits?
Cited by: 16
Author(s): Kaja Kastelic, Željko Pedišić, Dean Lipovac, Nika Kastelic, Sitong Chen, Nejc Šarabon
Software Mentions: 8
Published: about 5 years ago
10.1136/jitc-2020-002071
HLA Ligand Atlas: a benign reference of HLA-presented peptides to improve T-cell-based cancer immunotherapy
Cited by: 109
Author(s): Ana Marcu, Leon Bichmann, Lèon Kuchenbecker, Daniel J. Kowalewski, Lena Katharina Freudenmann, Linus Backert, Lena Mühlenbruch, András Szolek, Maren Lübke, Philipp Wagner, Tobias Engler, Sabine Matovina, Jian Wang, Mathias Hauri-Hohl, Thierry Martin, Konstantina Kapolou, Juliane S. Walz, Julia Velz, Holger Moch, Luca Regli, Manuela Silginer, Michael Weller, Markus Löffler, Florian Erhard, Andreas Schlösser, Oliver Kohlbacher, Stefan Stevanović, Hans Georg Rammensee, Marian C. Neidert
Software Mentions: 8
Published: about 5 years ago
10.3390/pathogens10010049
Immune Cell Production Is Targeted by Parasitoid Wasp Virulence in a Drosophila–Parasitoid Wasp Interaction
Cited by: 2
Author(s): Jordann E. Trainor, Pooja Kr, Nathan T. Mortimer
Software Mentions: 8
Published: over 5 years ago
10.1186/s12889-018-5235-x
The fundamental association between mental health and life satisfaction: results from successive waves of a Canadian national survey
Cited by: 121
Author(s): Patrick Lombardo, Wayne Jones, Liangliang Wang, Xin Shen, Elliot M. Goldner
Software Mentions: 8
Published: about 8 years ago
10.1371/journal.pone.0247476
Small area estimation and childhood obesity surveillance using electronic health records
Cited by: 5
Author(s): Ying‐Qi Zhao, Derek Norton, Larry Hanrahan
Software Mentions: 8
Published: over 5 years ago
10.7150/jca.49175
Biological functions and prognostic value of RNA Binding Proteins in clear cell Renal Cell Carcinoma
Cited by: 6
Author(s): Zhenpeng Zhu, Anbang He, Lanruo Lin, Chunru Xu, Tianyu Cai, Lin Jian
Software Mentions: 8
Published: over 6 years ago
10.1371/journal.pone.0211196
Myopia is associated with education: Results from NHANES 1999-2008
Cited by: 31
Author(s): Stefan Nickels, Susanne Hopf, Norbert Pfeiffer, Alexander K. Schuster
Software Mentions: 8
Published: over 7 years ago
10.1038/s41431-020-0699-4
Differences in local population history at the finest level: the case of the Estonian population
Cited by: 22
Author(s): Vasili Pankratov, Francesco Montinaro, Alena Kushniarevich, Georgi Hudjashov, Flora Jay, Lauri Saag, Rodrigo Flores, Davide Marnetto, Marten Seppel, Mart Kals, Urmo Võsa, Cristian Taccioli, Märt Möls, Lili Milani, Anto Aasa, Daniel J. Lawson, Tõnu Esko, Reedik Mägi, Luca Pagani, Andres Metspalu, Mait Metspalu
Software Mentions: 8
Published: almost 6 years ago
10.1371/journal.pone.0199841
Spatially explicit action research for coastal fisheries management
Cited by: 7
Author(s): Tara N. Lawrence, R. S. Bhalla
Software Mentions: 8
Published: almost 8 years ago
10.3390/ijms21103591
Examining Short-Term Responses to a Long-Term Problem: RNA-Seq Analyses of Iron Deficiency Chlorosis Tolerant Soybean
Cited by: 8
Author(s): Adrienne N. Moran Lauter, Lindsay Rutter, Dianne Cook, Jamie A. O’Rourke, Michelle A. Graham
Software Mentions: 8
Published: about 6 years ago
10.1371/journal.pone.0217804
Longitudinal microbiome profiling reveals impermanence of probiotic bacteria in domestic pigeons
Cited by: 12
Author(s): Kirsten Grond, Julie Perreau, Wesley T. Loo, A. James Spring, Colleen M. Cavanaugh, Sarah M. Hird
Software Mentions: 8
Published: almost 7 years ago
10.1007/s00787-020-01535-2
Visual search in ADHD, ASD and ASD + ADHD: overlapping or dissociating disorders?
Cited by: 13
Author(s): Divya Seernani, K. Damania, Chara Ioannou, N. Penkalla, Holger Hill, Tom Foulsham, Alan Kingstone, Nicola Anderson, Giuseppe Boccignone, Stephan Bender, N. Smyrnis, Monica Biscaldi, Ulrich W. Ebner‐Priemer, Christoph Klein
Software Mentions: 8
Published: about 6 years ago
10.1172/jci.insight.138751
In utero human intestine harbors unique metabolome, including bacterial metabolites
Cited by: 27
Author(s): Yujia Li, Jessica Toothaker, Shira Ben-Simon, Lital Ozeri, Ron Schweitzer, Blake McCourt, Collin C. McCourt, Lael Werner, Scott B. Snapper, Dror S. Shouval, Soliman Khatib, Omry Koren, Sameer Agnihorti, George C. Tseng, Liza Konnikova
Software Mentions: 8
Published: over 5 years ago
10.1371/journal.pone.0257471
Deciphering the low abundance microbiota of presumed aseptic hip and knee implants
Cited by: 2
Author(s): Charles Carr, Hannah Wilcox, Jeremy P. Burton, Sharanya Menon, Kait F. Al, David B. O’Gorman, Brent A. Lanting, Edward M. Vasarhelyi, Michael E. Neufeld, Matthew G. Teeter
Software Mentions: 8
Published: over 4 years ago
10.1186/s13072-019-0305-6
CGGBP1 regulates CTCF occupancy at repeats
Cited by: 12
Author(s): Divyesh Patel, Manthan Patel, Subhamoy Datta, Uma Singh
Software Mentions: 8
Published: over 6 years ago
10.1172/jci.insight.130510
Asymmetric cell division promotes therapeutic resistance in glioblastoma stem cells
Cited by: 19
Author(s): Masahiro Hitomi, Anastasia Chumakova, Daniel J. Silver, Arnon Møldrup Knudsen, William Pontius, Shaun Murphy, Neha Anand, Bjarne Winther Kristensen, Justin D. Lathia
Software Mentions: 8
Published: over 5 years ago
10.1155/2021/9920234
Bioinformatic Analysis Reveals Central Role for Tumor-Infiltrating Immune Cells in Uveal Melanoma Progression
Cited by: 6
Author(s): Mieszko Lachota, Anton Lennikov, Karl‐Johan Malmberg, Radosław Zagożdżon
Software Mentions: 8
Published: almost 5 years ago
10.7717/peerj.8303
TRANSPARENT TESTA GLABRA 1 participates in flowering time regulation in<i>Arabidopsis thaliana</i>
Cited by: 5
Author(s): Barbara A M Paffendorf, Rawan Qassrawi, Andrea M Meys, Laura Trimborn, Andrea Schrader
Software Mentions: 8
Published: over 6 years ago
10.3390/nu13072372
Assessment of Adherence to the Healthy Food Pyramid in Pregnant and Lactating Women
Cited by: 5
Author(s): Andrea Gila-Díaz, Ariadna Witte Castro, Gloria Herranz Carrillo, Pratibha Singh, William Yakah, Silvia M. Arribas, David Ramiro-Cortijo
Software Mentions: 8
Published: almost 5 years ago
10.1128/AEM.02601-17
Assessing Performance of Spore Samplers in Monitoring Aeromycobiota and Fungal Plant Pathogen Diversity in Canada
Cited by: 23
Author(s): Wen Chen, Sarah Hambleton, Keith A. Seifert, Odile Carisse, Moussa S. Diarra, R. D. Peters, Christine Lowe, Julie T. Chapados, C. André Lévesque
Software Mentions: 8
Published: about 8 years ago
10.1007/s10661-016-5710-8
Is the macrophyte diversification along the trophic gradient distinct enough for river monitoring?
Cited by: 14
Author(s): Krzysztof Szoszkiewicz, Anna Budka, Karol Pietruczuk, Dariusz Kayzer, Daniel Gebler
Software Mentions: 8
Published: over 9 years ago
10.1186/s41512-021-00103-9
The development and validation of prognostic models for overall survival in the presence of missing data in the training dataset: a strategy with a detailed example
Cited by: 1
Author(s): Kara-Louise Royle, David A. Cairns
Software Mentions: 8
Published: almost 5 years ago
10.3389/fmicb.2019.02761
Differently Pre-treated Alfalfa Silages Affect the in vitro Ruminal Microbiota Composition
Cited by: 6
Author(s): Thomas Hartinger, Joan E. Edwards, Ruth Gómez Expósito, Hauke Smidt, Cajo J. F. ter Braak, N. Gresner, K. H. Südekum
Software Mentions: 8
Published: over 6 years ago
10.1186/s12864-020-06971-7
Comparative genomic analysis of Flavobacteriaceae: insights into carbohydrate metabolism, gliding motility and secondary metabolite biosynthesis
Cited by: 44
Author(s): Asimenia Gavriilidou, Johanna Gutleben, Dennis Versluis, Francesca Forgiarini, Mark W. J. van Passel, Colin J. Ingham, Hauke Smidt, Detmer Sipkema
Software Mentions: 8
Published: almost 6 years ago
10.1523/ENEURO.0339-19.2020
Function, Innervation, and Neurotransmitter Signaling in Mice Lacking Type-II Taste Cells
Cited by: 16
Author(s): Eric D. Larson, Aurélie Vandenbeuch, Catherine B. Anderson, Sue C. Kinnamon
Software Mentions: 8
Published: over 6 years ago
10.1523/ENEURO.0426-17.2018
Circadian and Brain State Modulation of Network Hyperexcitability in Alzheimer’s Disease
Cited by: 31
Author(s): Rosalind Brown, Alice Lam, Alfredo Gonzalez-Sulser, Andrew Ying, Mary Jones, Robert Chang-Chih Chou, Makis Tzioras, Crispin Y. Jordan, Izabela Jedrasiak‐Cape, Anne-Laure Hemonnot-Girard, Maurice Abou Jaoude, Andrew J. Cole, Sydney S. Cash, Takashi Saito, Takaomi C. Saido, Richard R. Ribchester, K. Hashemi, Iris Oren
Software Mentions: 8
Published: over 8 years ago
10.1186/s13059-020-01998-1
Wheat chromatin architecture is organized in genome territories and transcription factories
Cited by: 89
Author(s): Lorenzo Concia, Alaguraj Veluchamy, Juan S. Ramirez-Prado, Azahara Martin-Ramirez, Ying Huang, Magali Perez, Séverine Domenichini, Natalia Y. Rodriguez Granados, Soon-Kap Kim, Thomas Blein, Susan Duncan, Clement Pichot, Deborah Manza‐Mianza, Caroline Juéry, Etienne Paux, Graham Moore, Heribert Hirt, Catherine Bergounioux, Martín Crespi, Magdy M. Mahfouz, Abdelhafid Bendahmane, Chang Liu, Anthony Hall, Cécile Raynaud, David Latrasse, Moussa Benhamed
Software Mentions: 8
Published: about 6 years ago
10.1186/s12864-021-07918-2
CeTF: an R/Bioconductor package for transcription factor co-expression networks using regulatory impact factors (RIF) and partial correlation and information (PCIT) analysis
Cited by: 10
Author(s): Carlos Alberto Oliveira de Biagi, Ricardo Perecin Nociti, Danielle Barbosa Brotto, Breno Osvaldo Funicheli, Patrícia de Cássia Ruy, João Paulo Bianchi Ximenez, David Livingstone Alves Figueiredo, Wilson A. Silva
Software Mentions: 8
Published: almost 5 years ago
10.1186/s12864-020-6703-0
Gut microbiota in children with juvenile idiopathic arthritis: characteristics, biomarker identification, and usefulness in clinical prediction
Cited by: 26
Author(s): Xubo Qian, Yong‐Xin Liu, Xiaohong Ye, Wen Jie Zheng, Shaoxia Lv, Miaojun Mo, Jinjing Lin, Wen-Qin Wang, Weihan Wang, Xianning Zhang, Meiping Lu
Software Mentions: 8
Published: about 6 years ago
10.1371/journal.pone.0231526
Disentangling the influence of ecological and historical factors on seed germination and seedling types in a Neotropical dry forest
Cited by: 5
Author(s): Jorge Cortés‐Flores, Guadalupe Cornejo‐Tenorio, María Esther Sánchez‐Coronado, Alma Orozco‐Segovia, Guillermo Ibarra‐Manríquez
Software Mentions: 8
Published: about 6 years ago
10.1186/s13059-019-1641-3
dStruct: identifying differentially reactive regions from RNA structurome profiling data
Cited by: 20
Author(s): Krishna Choudhary, Yi-Chun Lai, Elizabeth Tran, Sharon Aviran
Software Mentions: 8
Published: over 7 years ago
10.1186/s13059-018-1435-z
RNA m6A methylation participates in regulation of postnatal development of the mouse cerebellum
Cited by: 152
Author(s): Chunhui Ma, Mengqi Chang, Hongyi Lv, Zhiwei Zhang, Weilong Zhang, Xue He, Gaolang Wu, Shuaiyang Zhao, Yao Zhang, Di Wang, Xufei Teng, Chunying Liu, Qing Li, Arne Klungland, Yamei Niu, Shuhui Song, Wei‐Min Tong
Software Mentions: 8
Published: about 8 years ago
10.1186/s12859-016-1007-8
readat: An R package for reading and working with SomaLogic ADAT files
Cited by: 11
Author(s): Richard Cotton, Johannes Graumann
Software Mentions: 8
Published: about 10 years ago
10.1038/s42003-020-01156-0
Artificial eyespots on cattle reduce predation by large carnivores
Cited by: 12
Author(s): Cameron Radford, J. Weldon McNutt, Tracey L. Rogers, Ben Maslen, Neil R. Jordan
Software Mentions: 8
Published: almost 6 years ago
10.3390/ijms22105354
Genome-Wide Characterization of WRKY Transcription Factors Revealed Gene Duplication and Diversification in Populations of Wild to Domesticated Barley
Cited by: 7
Author(s): Jinhong Kan, Guang Gao, Qiang He, Qian Gao, Congcong Jiang, Sunny Ahmar, Jun Liu, Jing Zhang, Ping Yang
Software Mentions: 8
Published: about 5 years ago
10.1371/journal.pone.0247836
Integrated analysis of RNA-binding proteins in thyroid cancer
Cited by: 4
Author(s): Zhen Jing, Zhe Song, Wenjie Su, Qun Zeng, Jiacen Li, Qi Sun
Software Mentions: 8
Published: about 5 years ago
10.3390/e23010072
Unraveling of a Strongly Correlated Dynamical Network of Residues Controlling the Permeation of Potassium in KcsA Ion Channel
Cited by: 2
Author(s): Salvatore M. Cosseddu, Eunju Julia Choe, I. A. Khovanov
Software Mentions: 8
Published: over 5 years ago
10.1186/s13059-018-1567-1
Expression quantitative trait loci in the developing human brain and their enrichment in neuropsychiatric disorders
Cited by: 119
Author(s): Heath O’Brien, Eilís Hannon, Matthew Hill, Carolina Toste, Matthew J. Robertson, Joanne Morgan, Gemma M. McLaughlin, Cathryn M. Lewis, Leonard C Schalkwyk, Lynsey S. Hall, Antonio F. Pardiñas, Michael John Owen, Michael O’Donovan, Jonathan Mill, Nicholas John Bray
Software Mentions: 8
Published: over 7 years ago
10.1093/aobpla/plaa019
Genetic variation in early fitness traits across European populations of silver birch (Betula pendula)
Cited by: 7
Author(s): Aida Solé-Medina, Katrin Heer, Lars Opgenoorth, Phillip Kaldewey, Darius Danusevičius, Eduardo Notivol, Juan J. Robledo‐Arnuncio, José Alberto Ramírez‐Valiente
Software Mentions: 8
Published: about 6 years ago
10.3390/ijms22094696
Metabolic Profiling of VOCs Emitted by Bacteria Isolated from Pressure Ulcers and Treated with Different Concentrations of Bio-AgNPs
Cited by: 3
Author(s): Fernanda Monedeiro, Viorica Railean, Maciej Monedeiro-Milanowski
Software Mentions: 8
Published: about 5 years ago
10.3390/antiox10060864
Blood Plasma Quality Control by Plasma Glutathione Status
Cited by: 2
Author(s): Tamara Tomin, Natalie Bordag, Elmar Zügner, A Al-Baghdadi, Maximilian Schinagl, Ruth Birner‐Gruenberger, Matthias Schittmayer
Software Mentions: 8
Published: about 5 years ago
10.1371/journal.pone.0197370
Immunity levels to poliovirus in Lao children and adults before the vaccine-derived poliovirus outbreak: A retrospective study
Cited by: 2
Author(s): Maude Pauly, Antony P. Black, Phonepaseuth Khampanisong, Phonethipsavanh Nouanthong, Judith M. Hübschen, Naphavanh Nanthavong, Kong Sayasinh, Prapan Jutavijittum, Bounthome Samountry, Anonh Xeuatvongsa, Sabine Diedrich, Claude P. Muller
Software Mentions: 8
Published: about 8 years ago
10.3390/e23060695
Knowledge Discovery from Medical Data and Development of an Expert System in Immunology
Cited by: 3
Author(s): Małgorzata Pac, Irina Mikutskaya, Jan J. Mulawka
Software Mentions: 8
Published: about 5 years ago
10.3390/ijms22073296
Selective Activation of CNS and Reference PPARGC1A Promoters Is Associated with Distinct Gene Programs Relevant for Neurodegenerative Diseases
Cited by: 5
Author(s): Markus Kwik, Stefan Hainzl, Jan Oppelt, Boris Tichý, Ulrich Koller, Emanuele Bernardinelli, Markus J. Steiner, Greta Zara, Charity Nofziger, Serge Weis, Markus Paulmichl, Silvia Dossena, Wolfgang Patsch, Selma M. Soyal
Software Mentions: 8
Published: about 5 years ago
10.1038/s41598-018-23630-w
The Anti-Cancer Multikinase Inhibitor Sorafenib Impairs Cardiac Contractility by Reducing Phospholamban Phosphorylation and Sarcoplasmic Calcium Transients
Cited by: 21
Author(s): Christopher Schneider, Markus Wallner, Ewald Kolesnik, Viktoria Herbst, Heinrich Mächler, Martin Pichler, Dirk von Lewinski, Simon Sedej, Peter P. Rainer
Software Mentions: 8
Published: about 8 years ago
10.3390/pathogens10080988
Predominance of the SARS-CoV-2 Lineage P.1 and Its Sublineage P.1.2 in Patients from the Metropolitan Region of Porto Alegre, Southern Brazil in March 2021
Cited by: 11
Author(s): Vinícius Bonetti Franceschi, Gabriel Dickin Caldana, Christiano Perin, Alexandre Horn, Camila Peter, Gabriela Bettella Cybis, Patrícia Aline Gröhs Ferrareze, Liane Nanci Rotta, Flavio Cadegiani, Ricardo Ariel Zimerman, Claudia Elizabeth Thompson
Software Mentions: 8
Published: almost 5 years ago
10.1002/dad2.12066
Semantic loss marks early Alzheimer's disease‐related neurodegeneration in older adults without dementia
Cited by: 20
Author(s): Jet M.J. Vonk, Vincent Bouteloup, Jean‐François Mangin, Bruno Dubois, ‪Frederic Blanc‬, Audrey Gabelle, Mathieu Ceccaldi, Cédric Annweiler, Pierre Krolak‐Salmon, Cathérine Belin, Thérèse Rivasseau‐Jonveaux, Adrien Julian, François Sellal, Éloi Magnin, Marie Chupin, Marie‐Odile Habert, Geneviève Chêne, Carole Dufouil
Software Mentions: 8
Published: over 6 years ago
10.3389/fonc.2021.706915
A Novel Nine-lncRNA Risk Signature Correlates With Immunotherapy in Hepatocellular Carcinoma
Cited by: 8
Author(s): Ye Nie, Jianhui Li, Wenlong Wu, Dongnan Guo, Xinjun Lei, Tianchen Zhang, Yanfang Wang, Zhenzhen Mao, Xuan Zhang, Wenjie Song
Software Mentions: 8
Published: over 4 years ago
10.1371/journal.pone.0253847
TeamTree analysis: A new approach to evaluate scientific production
Cited by: 2
Author(s): Frank W. Pfrieger
Software Mentions: 8
Published: almost 5 years ago
10.1038/s41598-018-24733-0
Insular threat associations within taxa worldwide
Cited by: 39
Author(s): Camille Leclerc, Franck Courchamp, Céline Bellard
Software Mentions: 8
Published: about 8 years ago
10.3390/ijms21134630
Self-Repair in Cacti Branches: Comparative Analyses of Their Morphology, Anatomy, and Biomechanics
Cited by: 10
Author(s): Max D. Mylo, Friederike Krüger, Thomas Speck, Olga Speck
Software Mentions: 8
Published: almost 6 years ago
10.3390/plants10081536
Variation in Gene Expression between Two Sorghum bicolor Lines Differing in Innate Immunity Response
Cited by: 2
Author(s): Yaya Cui, Dongqin Chen, Yuyong Jiang, Dong Xu, Peter Balint‐Kurti, Gary Stacey
Software Mentions: 8
Published: almost 5 years ago
10.1093/eurheartj/ehaa756
Midlife blood pressure is associated with the severity of white matter hyperintensities: analysis of the UK Biobank cohort study
Cited by: 56
Author(s): Karolina Wartolowska, Alastair Webb
Software Mentions: 8
Published: over 5 years ago
10.18632/aging.102513
Daily decrease of post-operative alpha-fetoprotein by 9% discriminates prognosis of HCC: A multicenter retrospective study
Cited by: 6
Author(s): Pei‐Yun Zhou, Chao‐Ping Yang, Zheng Tang, Yong Yi, Wei‐Ren Liu, Min Tian, Huang Ji, Wei Gan, Xi‐Fei Jiang, Liu Gao, Han Wang, Chenyang Tao, Yuan Fang, Wei‐Feng Qu, Cheng Zhou, Ruijuan Guan, Bao-Ye Sun, Yu‐Fu Zhou, Shushu Song, Zhen‐Bin Ding, Yuan‐Fei Peng, Zhi Dai, Jian Zhou, Jia Fan, Guozhong Gong, Ying‐Hong Shi, Shuang–Jian Qiu
Software Mentions: 8
Published: over 6 years ago
10.1186/s12935-020-01661-6
Intestinal region-specific Wnt signalling profiles reveal interrelation between cell identity and oncogenic pathway activity in cancer development
Cited by: 6
Author(s): R. Adam, Sanne M. van Neerven, Cayetano Pleguezuelos-Manzano, Salvatore Simmini, Nicolas Léveillé, Nina E. de Groot, Andrew N Holding, Florian Markowetz, Louis Vermeulen
Software Mentions: 8
Published: over 5 years ago
10.3389/fpls.2017.00930
The Influence of Land Use Intensity on the Plant-Associated Microbiome of Dactylis glomerata L.
Cited by: 44
Author(s): Jennifer Estendorfer, Barbara Stempfhuber, Paula Haury, Gisle Vestergaard, Matthias C. Rillig, Jasmin Joshi, Peter Schröder, Michael Schloter
Software Mentions: 8
Published: almost 9 years ago
10.1093/conphys/coab047
An organizing feature of bumble bee life history: worker emergence promotes queen reproduction and survival in young nests
Cited by: 7
Author(s): Erica Sarro, Penglin Sun, Kerry E. Mauck, Damaris Rodriguez-Arellano, Naoaki Yamanaka, S. Hollis Woodard
Software Mentions: 8
Published: over 5 years ago
10.1186/s12863-020-00936-1
Separating two tightly linked species-defining phenotypes in Bactrocera with hybrid recombinant analysis
Cited by: 7
Author(s): Heng Lin Yeap, Siu Fai Lee, Freya Robinson, Roslyn Mourant, J. A. Sved, Michael Frommer, Alexie Papanicolaou, Owain Edwards, John G. Oakeshott
Software Mentions: 8
Published: over 5 years ago
10.3389/fmicb.2021.627437
A Taxon-Wise Insight Into Rock Weathering and Nitrogen Fixation Functional Profiles of Proglacial Systems
Cited by: 4
Author(s): Gilda Varliero, Alexandre M. Anesio, Gary Barker
Software Mentions: 8
Published: over 4 years ago
10.1016/j.csbj.2021.05.024
Machine learning applied to serum and cerebrospinal fluid metabolomes revealed altered arginine metabolism in neonatal sepsis with meningoencephalitis
Cited by: 12
Author(s): Peng Zhang, Zhangxing Wang, Huixian Qiu, Wenhao Zhou, Mingbang Wang, Guoqiang Cheng
Software Mentions: 8
Published: over 5 years ago
10.1128/Spectrum.00536-21
Mild and Severe SARS-CoV-2 Infection Induces Respiratory and Intestinal Microbiome Changes in the K18-hACE2 Transgenic Mouse Model
Cited by: 16
Author(s): Brittany Seibert, C. Joaquín Cáceres, Stivalis Cárdenas-García, Silvia Carnaccini, Ginger Geiger, Daniela S. Rajão, Elizabeth A. Ottesen, Daniel R. Pérez
Software Mentions: 8
Published: over 4 years ago
10.1128/mSystems.00122-17
Market Integration Predicts Human Gut Microbiome Attributes across a Gradient of Economic Development
Cited by: 27
Author(s): Keaton Stagaman, Tara J Cepon-Robins, Melissa A. Liebert, Theresa E. Gildner, Samuel S. Urlacher, Felicia C. Madimenos, Karen Guillemin, J. Josh Snodgrass, Lawrence S. Sugiyama, Brendan J. M. Bohannan
Software Mentions: 8
Published: over 8 years ago
10.1186/s40168-019-0626-5
Choice of assembly software has a critical impact on virome characterisation
Cited by: 94
Author(s): Thomas D.S. Sutton, Adam G. Clooney, Feargal J. Ryan, R. Paul Ross, Colin Hill
Software Mentions: 8
Published: over 7 years ago
10.1186/s12870-019-2182-3
A comparative gene co-expression analysis using self-organizing maps on two congener filmy ferns identifies specific desiccation tolerance mechanisms associated to their microhabitat preference
Cited by: 9
Author(s): Enrique Ostria‐Gallardo, Giovanni Larama, Graciela Berríos, Ana Fallard, Ana Gutiérrez-Moraga, Ingo Ensminger, León A. Bravo
Software Mentions: 8
Published: over 6 years ago
10.18632/aging.202515
Cell differentiation trajectory predicts patient potential immunotherapy response and prognosis in gastric cancer
Cited by: 18
Author(s): Renshen Xiang, Yuping Rong, Yuhang Ge, Wei Song, Jun Ren, Tao Fu
Software Mentions: 8
Published: over 5 years ago
10.1128/mSphere.00916-19
Dual and Triple Epithelial Coculture Model Systems with Donor-Derived Microbiota and THP-1 Macrophages To Mimic Host-Microbe Interactions in the Human Sinonasal Cavities
Cited by: 15
Author(s): Charlotte De Rudder, Marta Calatayud, Sarah Lebeer, Tom Van de Wiele
Software Mentions: 8
Published: over 6 years ago
10.1016/S2542-5196(21)00030-9
Identifying urban hotspots of dengue, chikungunya, and Zika transmission in Mexico to support risk stratification efforts: a spatial analysis
Cited by: 28
Author(s): Felipe Dzul-Manzanilla, Fabián Correa-Morales, Azael Che-Mendoza, Jorge Palacio-Vargas, Gustavo Sánchez-Tejeda, Jesús Felipe González-Roldán, Hugo López‐Gatell, Adriana E. Flores-Suárez, Héctor Gómez–Dantés, Giovanini Evelim Coelho, Haroldo Sergio da Silva Bezerra, Norma Pavía-Ruz, Audrey Lenhart, Pablo Manrique-Saide, Gonzalo M. Vázquez-Prokopec
Software Mentions: 8
Published: about 5 years ago
10.1186/s12862-017-0976-1
The effect of body size evolution and ecology on encephalization in cave bears and extant relatives
Cited by: 9
Author(s): Kristof Veitschegger
Software Mentions: 8
Published: almost 9 years ago