Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13072-019-0305-6

https://doi.org/10.1186/s13072-019-0305-6

CGGBP1 regulates CTCF occupancy at repeats

Cited by: 12
Author(s): Divyesh Patel, Manthan Patel, Subhamoy Datta, Uma Singh
Published: about 5 years ago

Software Mentions 8

bioconductor: DiffBind
Differential Binding Analysis of ChIP-Seq Peak Data
Papers that mentioned: 217
cran: fasta
Fast Adaptive Shrinkage/Thresholding Algorithm
Papers that mentioned: 848
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: meme
Create Meme
Papers that mentioned: 31
pypi: deepTools
Useful tools for exploring deep sequencing data.
Papers that mentioned: 435
pypi: fasta
The fasta python package enables you to deal with biological sequence files easily.
Papers that mentioned: 848
pypi: MACS2
Model Based Analysis for ChIP-Seq data
Papers that mentioned: 1,203
pypi: meme
Use the command line to generate memes on memegenerator.co
Papers that mentioned: 31