Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13148-016-0230-5

https://doi.org/10.1186/s13148-016-0230-5

Peripheral blood methylation profiling of female Crohn’s disease patients

Cited by: 40
Author(s): Andrew Y. Li Yim, Nicolette W. Duijvis, Jing Hua Zhao, Wouter J. de Jonge, Geert R. D’Haens, Marcel M.A.M. Mannens, Adri N. Mul, Anje A. te Velde, Peter Henneman
Published: over 8 years ago

Software Mentions 8

bioconductor: bumphunter
Bump Hunter
Papers that mentioned: 46
bioconductor: Gviz
Plotting data and annotation information along genomic coordinates
Papers that mentioned: 134
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
bioconductor: MethylAid
Visual and interactive quality control of large Illumina DNA Methylation array data sets
Papers that mentioned: 28
bioconductor: missMethyl
Analysing Illumina HumanMethylation BeadChip Data
Papers that mentioned: 54
cran: ggplot2
Create Elegant Data Visualisations Using the Grammar of Graphics
Papers that mentioned: 11,441
cran: ruv
Detect and Remove Unwanted Variation using Negative Controls
Papers that mentioned: 4
pypi: ruv
Command line interface for RUV (http://www.ruv.is)
Papers that mentioned: 4