bioconductor: GENESIS | Projects | Ecosyste.ms: Papers

10.3389/fninf.2018.00068

Code Generation in Computational Neuroscience: A Review of Tools and Techniques
Cited by: 27
Author(s): Inga Blundell, Romain Brette, Thomas A. Cleland, Thomas G. Close, Daniel Coca, Andrew P. Davison, Sandra Diaz-Pier, Carlos Fernandez Musoles, Padraig Gleeson, Dan F. M. Goodman, Michael L. Hines, Michael Hopkins, Pramod Kumbhar, David Lester, Bóris Marin, Abigail Morrison, Eric Müller, Thomas Nowotny, Alexander Peyser, Dimitri Plotnikov, Paul Richmond, Andrew Rowley, Bernhard Rumpe, Marcel Stimberg, Alan B. Stokes, Adam Tomkins, Guido Trensch, Michael Woodman, Jochen Martin Eppler
Software Mentions: 16
Published: about 6 years ago

10.1371/journal.pgen.1009110

Unique genetic signatures of local adaptation over space and time for diapause, an ecologically relevant complex trait, in Drosophila melanogaster
Cited by: 45
Author(s): Priscilla A. Erickson, Cory A. Weller, Daniel Song, Alyssa Bangerter, Paul S. Schmidt, Alan O. Bergland
Software Mentions: 15
Published: about 4 years ago

10.1186/s12868-019-0538-0

28th Annual Computational Neuroscience Meeting: CNS*2019
Cited by: 3
Author(s):
Software Mentions: 13
Published: about 5 years ago

10.12688/f1000research.15949.2

The Mega2R package: R tools for accessing and processing genetic data in common formats
Cited by: 0
Author(s): R. Baron, Justin R. Stickel, Daniel E. Weeks
Software Mentions: 12
Published: over 5 years ago

10.7554/eLife.44494

NetPyNE, a tool for data-driven multiscale modeling of brain circuits
Cited by: 101
Author(s): Salvador Dura‐Bernal, Benjamin A. Suter, Padraig Gleeson, Matteo Carandini, Adrián Quintana, Facundo Rodriguez, David J. Kedziora, George L. Chadderdon, Cliff C. Kerr, Samuel A. Neymotin, Robert A. McDougal, Michael L. Hines, Gordon M. Shepherd, William W. Lytton
Software Mentions: 10
Published: over 5 years ago

10.7554/eLife.47314

Brian 2, an intuitive and efficient neural simulator
Cited by: 372
Author(s): Marcel Stimberg, Romain Brette, Dan F. M. Goodman
Software Mentions: 10
Published: over 5 years ago

10.1371/journal.pone.0029018

Python as a Federation Tool for GENESIS 3.0
Cited by: 26
Author(s): Hugo Cornelis, Antony Rodríguez, Allan D Coop, James M. Bower
Software Mentions: 10
Published: almost 13 years ago

10.3389/fninf.2015.00019

ANNarchy: a code generation approach to neural simulations on parallel hardware
Cited by: 65
Author(s): Julien Vitay, Helge Ülo Dinkelbach, Fred H. Hamker
Software Mentions: 9
Published: over 9 years ago

10.3389/fninf.2017.00046

Software for Brain Network Simulations: A Comparative Study
Cited by: 42
Author(s): Ruben A. Tikidji-Hamburyan, Vikram K. Narayana, Zeki Bozkuş, Tarek El‐Ghazawi
Software Mentions: 9
Published: over 7 years ago

10.1186/s12868-020-00593-1

29th Annual Computational Neuroscience Meeting: CNS*2020
Cited by: 1
Author(s):
Software Mentions: 9
Published: almost 4 years ago

10.3389/fninf.2014.00063

A flexible, interactive software tool for fitting the parameters of neuronal models
Cited by: 25
Author(s): Péter Friedrich, M.C. Vella, Attila I. Gulyás, Tamás F. Freund, Szabolcs Káli
Software Mentions: 8
Published: over 10 years ago

10.1371/journal.pcbi.1007696

The SONATA data format for efficient description of large-scale network models
Cited by: 26
Author(s): Kael Dai, Juan Hernando, Yazan N. Billeh, Sergey L. Gratiy, Judit Planas, Andrew P. Davison, Salvador Dura‐Bernal, Padraig Gleeson, Adrien Devresse, Benjamin Dichter, Michael Gevaert, James G. King, Werner A. H. Van Geit, Arseny V. Povolotsky, Eilif Müller, Jean-Denis Courcol, Anton Arkhipov
Software Mentions: 8
Published: over 4 years ago

10.1186/s12868-017-0371-2

26th Annual Computational Neuroscience Meeting (CNS*2017): Part 2
Cited by: 7
Author(s): Leonid L. Rubchinsky, Sungwoo Ahn, Wouter Klijn, Ben Cumming, Stuart Yates, Vasileios Karakasis, Alexander Peyser, Marmaduke Woodman, Sandra Diaz-Pier, James Deraeve, Eliana Vassena, William H. Alexander, David Beeman, Paweł Kudela, Dana Boatman-Reich, William S. Anderson, Niceto R. Luque, Francisco Naveros, Richard R. Carrillo, Eduardo Ros, Angelo Arleo, Jacob Huth, Koki Ichinose, Jihoon Park, Yuji Kawai, Junko Suzuki, Hiroki Mori, Minoru Asada, Sorinel A. Oprisan, Austin I. Dave, Tahereh Babaie, Peter Robinson, Alejandro Tabas, Martin Andermann, André Rupp, Emili Balaguer‐Ballester, Henrik Lindén, Rasmus Kordt Christensen, Mari Nakamura, Tania Rinaldi Barkat, Zach Tosi, John M. Beggs, Davide Lonardoni, Fabio Boi, Stefano Di Marco, Alessandro Maccione, Luca Berdondini, Joanna Jędrzejewska‐Szmek, Daniel B. Dormán, Kim T. Blackwell, Christoph Bauermeister, Hanna Keren, Jochen Braun, João V. Dornas, Eirini Mavritsaki, Silvio Aldrovandi, Emma K. Bridger, Sukbin Lim, Nicolas Brunel, Anatoly Buchin, Clifford Charles Kerr, Anton V. Chizhov, Gilles Huberfeld, Richard Miles, Boris Gutkin, Martin Spencer, Hamish Meffin, David B. Grayden, Anthony N. Burkitt, Catherine E. Davey, Liangyu Tao, Vineet Tiruvadi, Rehman Ali, Helen S. Mayberg, Robert J. Butera, Cengiz Günay, Damon G. Lamb, Ronald L. Calabrese, Anca Doloc-Mihu, Víctor J. López‐Madrona, Fernanda S. Matias, Ernesto Pereda, Claudio R. Mirasso, Santiago Canals, Alice Geminiani, Alessandra Pedrocchi, Egidio D’Angelo, Claudia Casellato, Ankur Chauhan, Karthik Soman, V. Srinivasa Chakravarthy, Vignayanandam Ravindernath Muddapu, Chao-Chun Chuang, Nan-yow Chen, Mehdi Bayati, Jan Melchior, Laurenz Wiskott, Amir Azizi, Kamran Diba, Sen Cheng, Elena Y. Smirnova, E. G. Yakimova, Chi-Tin Shih, Dorian Florescu, Daniel Coca, Julie Courtiol, Viktor K. Jirsa, R. J. M. Covolan, Bartosz Teleńczuk, Richard Kempter, Gabriel Curio, Alain Destexhe, Jessica Parker, Alexander N. Klishko, Boris I. Prilutsky, Gennady Cymbalyuk, Felix Franke, Andreas Hierlemann, Rava Azeredo da Silveira, Stefano Casali, Stefano Masoli, Martina Francesca Rizza, Yinming Sun, Willy Wong, Faranak Farzan, Daniel M. Blumberger, Zafiris J. Daskalakis, Svitlana Popovych, Shivakumar Viswanathan, Nils Rosjat, Christian Grefkes, Silvia Daun, Damiano Gentiletti, Piotr Suffczyński, Vadym Gnatkovski, Marco de Curtis, Hyeonsu Lee, Se‐Bum Paik, Woochul Choi, Jaeson Jang, Youngjin Park, Jun Song, Min Song, Vicente Pallarés, Matthieu Gilson, Simone Kühn, Andrea Insabato, Gustavo Deco, Katharina Glomb, Adrián Ponce‐Alvarez, Petra Ritter, Adrià Tauste Campo, Alexander Thiele, F. Deeba, P. A. Robinson, Sacha J. van Albada, Andrew Rowley, Michael Hopkins, Maximilian Schmidt, Alan B. Stokes, David Lester, Steve Furber, Markus Diesmann, Alessandro Barri, Martin T. Wiechert, David A. DiGregorio, Alexander G. Dimitrov, Catalina Vich, Rune W. Berg, Antoni Guillamón, Susanne Ditlevsen, Romain D. Cazé, Benoît Girard, Stéphane Doncieux, Nicolas Doyon, Frank Boahen, Patrick Desrosiers, Edward Laurence, Louis J. Dubé, Eleonora Russo, Daniel Durstewitz, Dominik Schmidt, Tuomo Mäki‐Marttunen, Florian Krull, Francesco Bettella, Christoph Metzner, Anna Devor, Srdjan Djurovic, Anders M. Dale, Ole A. Andreassen, Gaute T. Einevoll, Solveig Næss, Torbjørn V. Ness, Geir Halnes, Eric Halgren, Klas H. Pettersen, Marte J. Sætra, Espen Hagen, Alina Schiffer, Axel Grzymisch, Malte Persike, Udo Ernst, Daniel Harnack, Nergis Tömen, Stefano Zucca, Valentina Pasquale, Giuseppe Pica, Manuel Molano-Mazón, Michela Chiappalone, Stefano Panzeri, Tommaso Fellin, Kelvin S. Oie, David L. Boothe, Joshua C. Crone, Alfred B. Yu, Melvin Felton, Isma Zulfiqar, Michelle Moerel, Peter De Weerd, Elia Formisano, Piotr J. Franaszczuk, Roland Diggelmann, Michele Fiscella, Domenico Guarino, Ján Antolík, Andrew Davison, Yves Frégnac, Benjamin Xavier Etienne, Flavio Fröhlich, Jérémie Lefebvre, Encarni Marcos, Maurizio Mattia, Aldo Genovesio, Leonid Fedorov, Tjeerd M. H. Dijkstra, Louisa Sting, Howard S. Hock, Martin A. Giese, Laure Buhry, Clément Langlet, Francesco Giovannini, Christophe Verbist, Stefano Salvadè, Michèle Giugliano, James A. Henderson, Hendrik Wernecke, Bulcsú Sándor, Claudius Gros, Nicole Voges, Paulina Dabrovska, Alexa Riehle, Thomas Brochier, Sonja Grün, Y. T. Gu, Pulin Gong, Grégory Dumont, Nikita A. Novikov, Parul Tewatia, Olivia Eriksson, Andrei Kramer, João Pedro Gonçalves dos Santos, Alexandra Jauhiainen, Jeanette Hellgren Kotaleski, Jovana J. Belić, Arvind Kumar, Masanori Shimono, Naomichi Hatano, Subutai Ahmad, Yuwei Cui, Jeff Hawkins, Johanna Senk, Karolína Korvasová, Tom Tetzlaff, Moritz Helias, Tobias Kühn, Michael Denker, PierGianLuca Porta Mana, David Dahmen, Jannis Schuecker, Sven Goedeke, Christian Keup, Katja Heuer, Rembrandt Bakker, Paul Tiesinga, Roberto Toro, Wei Qin, Alex E. Hadjinicolaou, M. Ibbotson, Tatiana Kameneva, William W. Lytton, Lealem Mulugeta, Andrew Drach, Jerry G. Myers, Marc Horner, Rajanikanth Vadigepalli, Tina Morrison, Marlei Walton, Martin J. Steele, C. Anthony Hunt, Nicoladie D. Tam, Rodrigo Amaducci, Carlos Múñiz, Manuel Reyes-Sánchez, Francisco B. Rodríguez, Pablo Varona, Joseph T. Cronin, Matthias Hennig, Elisabetta Iavarone, Jane Yi, Ying Shi, Bas-Jan Zandt, Werner Van Geit, Christian Rössert, Henry Markram, Sean Hill, Christian O’Reilly, Rodrigo Perin, Huanxiang Lu, Alexander Bryson, Michal Hadrava, Jaroslav Hlinka, Ryosuke Hosaka, Mark Olenik, Conor Houghton, Nicolangelo Iannella, Thomas Lavstsen, Rebecca Kotsakidis, Jaymar Soriano, Takatomi Kubo, Takao Inoue, Hirotaka Kida, Toshitaka Yamakawa, Michiyasu Suzuki, Kazushi Ikeda, Samira Abbasi, Amber E. Hudson, Detlef H. Heck, Dieter Jaeger, Joel Lee, Skirmantas Janušonis, Maria Luisa Saggio, Andreas Spiegler, William C. Stacey, Christophe Bernard, Davide Lillo, Spase Petkoski, Mark Drakesmith, Derek K. Jones, Ali Sadegh Zadeh, C. Kambhampati, Jan Karbowski, Zeynep Gokcen Kaya, Yair Lakretz, Alessandro Treves, Lily W. Li, Joseph T. Lizier, Cliff C. Kerr, Timothée Masquelier, Saeed Reza Kheradpisheh, Hojeong Kim, Chang Sub Kim, J. Marakshina, A. Vartanov, Anastasia Neklyudova, S. Kozlovskiy, A. Kiselnikov, Kanako Taniguchi, Katsunori Kitano, Oliver Schmitt, Felix Leßmann, Sebastian Schwanke, Peter Eipert, Meinhardt Jennifer, Julia Beier, Kanar Kadir, Adrian Karnitzki, Linda Sellner, Ann-Christin Klünker, Lena Kuch, Frauke Ruß, Jörg Jenssen, Andreas Wree, Paula Sanz‐Leon, S. A. Knock, Shih-Cheng Chien, Burkhard Maeß, Thomas R. Knösche, Charles C.H. Cohen, Marko Popović, Jan Klooster, Maarten H. P. Kole, Erik A. Roberts, Nancy Kopell, Daniel Kepple, Hamza Giaffar, Dima Rinberg, Alex Koulakov, Caroline Garcia Forlim, Leonie Klock, Johanna Bächle, Laura Stoll, Patrick Giemsa, Marie Fuchs, Nikola Schoofs, Christiane Montag, Jürgen Gallinat, Ray X. Lee, Greg Stephens, Bernd Kühn, Luiz Tauffer, Philippe Isope, Katsuma Inoue, Yoshiyuki Ohmura, Shogo Yonekura, Yasuo Kuniyoshi, Hyun Jae Jang, Jeehyun Kwag, Marc de Kamps, Yi Ming Lai, Filipa Santos, K. P. Lam, Péter András, Julia P. Imperatore, Jessica Helms, Tamás Tompa, Antonieta Lavín, Felicity H Inkpen, Michael C. Ashby, Nathan F. Lepora, Aaron R. Shifman, John E. Lewis, Zhong Zhang, Yeqian Feng, Christian Tetzlaff, Tomas Kulvičius, Yinyun Li, Rodrigo F. O. Pena, Davide Bernardi, Antonio Roque, Benjamin Lindner, Sebastian Vellmer, Aušra Saudargienė, Tiina Maninen, Riikka Havela, Marja-Leena Linne, Arthur S. Powanwe, André Longtin, Jesús Garrido, Joe W. Graham, Salvador Dura‐Bernal, Sergio Angulo, Samuel A. Neymotin, Srdjan D. Antic
Software Mentions: 7
Published: over 7 years ago

10.3389/fninf.2013.00010

The Virtual Brain: a simulator of primate brain network dynamics
Cited by: 296
Author(s): Paula Sanz-Leon, S. A. Knock, Michael Woodman, Lia Domide, Jochen Mersmann, Anthony R. McIntosh, Viktor K. Jirsa
Software Mentions: 7
Published: almost 12 years ago

10.3389/fninf.2013.00028

Reaction-diffusion in the NEURON simulator
Cited by: 52
Author(s): Robert A. McDougal, Michael L. Hines, William W. Lytton
Software Mentions: 7
Published: almost 12 years ago

10.1038/s42003-019-0719-5

Genetic variation drives seasonal onset of hibernation in the 13-lined ground squirrel
Cited by: 25
Author(s): Katharine R. Grabek, Thomas F. Cooke, L. Elaine Epperson, Kaitlyn Spees, Gleyce Fonseca Cabral, Shirley Sutton, Dana K. Merriman, Sandra L. Martin, Carlos D. Bustamante
Software Mentions: 7
Published: almost 5 years ago

10.1371/journal.pone.0066811

Integration of Biochemical and Electrical Signaling-Multiscale Model of the Medium Spiny Neuron of the Striatum
Cited by: 25
Author(s): Michele Mattioni, Nicolas Le Novère
Software Mentions: 7
Published: over 11 years ago

10.1186/s12868-018-0452-x

27th Annual Computational Neuroscience Meeting (CNS*2018): Part One
Cited by: 2
Author(s):
Software Mentions: 7
Published: about 6 years ago

10.7554/eLife.58615

GWAS of three molecular traits highlights core genes and pathways alongside a highly polygenic background
Cited by: 67
Author(s): Nasa Sinnott-Armstrong, Sahin Naqvi, Manuel A. Rivas, Jonathan K. Pritchard
Software Mentions: 7
Published: almost 4 years ago

10.3389/fgene.2020.00936

NRG1, PIP4K2A, and HTR2C as Potential Candidate Biomarker Genes for Several Clinical Subphenotypes of Depression and Bipolar Disorder
Cited by: 13
Author(s): Аnastasia Levchenko, N. Vyalova, Timur Nurgaliev, Ivan V Pozhidaev, German G. Simutkin, Н. А. Бохан, Светлана Иванова
Software Mentions: 7
Published: about 4 years ago

10.3389/fncom.2019.00046

A Closed-Loop Toolchain for Neural Network Simulations of Learning Autonomous Agents
Cited by: 5
Author(s): Jakob Jordan, Philipp Weidel, Abigail Morrison
Software Mentions: 6
Published: over 5 years ago

10.3389/fnins.2021.667011

Benchmarking Highly Parallel Hardware for Spiking Neural Networks in Robotics
Cited by: 5
Author(s): Lea Steffen, Robin Koch, Stefan Ulbrich, Sven Nitzsche, Arne Roennau, Rüdiger Dillmann
Software Mentions: 6
Published: over 3 years ago

10.1371/journal.pcbi.1002521

The Layer-Oriented Approach to Declarative Languages for Biological Modeling
Cited by: 10
Author(s): Ivan Raikov, Erik De Schutter
Software Mentions: 6
Published: over 12 years ago

10.1534/g3.118.200129

Genome-Wide Association Mapping Uncovers Fw1, a Dominant Gene Conferring Resistance to Fusarium Wilt in Strawberry
Cited by: 40
Author(s): Dominique D A Pincot, Thomas J. Poorten, Michael A. Hardigan, Julia M. Harshman, Charlotte B. Acharya, Glenn Cole, Thomas R. Gordon, Michelle Stueven, Patrick P. Edger, Steven J. Knapp
Software Mentions: 6
Published: over 6 years ago

10.3389/fbioe.2014.00061

Improving Collaboration by Standardization Efforts in Systems Biology
Cited by: 49
Author(s): Andreas Dräger, Bernhard Ø. Palsson
Software Mentions: 6
Published: almost 10 years ago

10.1371/journal.pcbi.1008386

Brain Modeling ToolKit: An open source software suite for multiscale modeling of brain circuits
Cited by: 28
Author(s): Kael Dai, Sergey L. Gratiy, Yazan N. Billeh, Richard Xu, Bin Cai, Nicholas Cain, Atle E Rimehaug, A. Stasik, Gaute T. Einevoll, Ştefan Mihalaş, Christof Koch, Anton Arkhipov
Software Mentions: 6
Published: almost 4 years ago

10.5334/jors.179

GENESIS – The GENEric SImulation System for Modelling State Transitions
Cited by: 0
Author(s): Matthew Gillman
Software Mentions: 6
Published: about 7 years ago

10.1371/journal.pcbi.1000815

NeuroML: A Language for Describing Data Driven Models of Neurons and Networks with a High Degree of Biological Detail
Cited by: 284
Author(s): Padraig Gleeson, Sharon Crook, Robert C. Cannon, Michael L. Hines, Guy O Billings, Matteo Farinella, Thomas M. Morse, Andrew P. Davison, Subhasis Ray, Upinder S. Bhalla, Simon R Barnes, Yoana D Dimitrova, R. Angus Silver
Software Mentions: 5
Published: over 14 years ago

10.3389/fninf.2021.614881

MIIND : A Model-Agnostic Simulator of Neural Populations
Cited by: 4
Author(s): Hugh Osborne, Yi Ming Lai, Mikkel Elle Lepperød, David Sichau, Lukas Deutz, Marc de Kamps
Software Mentions: 5
Published: over 3 years ago

10.3389/fninf.2018.00047

Parameter Optimization Using Covariance Matrix Adaptation—Evolutionary Strategy (CMA-ES), an Approach to Investigate Differences in Channel Properties Between Neuron Subtypes
Cited by: 13
Author(s): Zbigniew Jędrzejewski-Szmek, Karina Possa Abrahao, Joanna Jędrzejewska‐Szmek, David M. Lovinger, Kim T. Blackwell
Software Mentions: 5
Published: over 6 years ago

10.3389/fninf.2018.00015

PyMUS: Python-Based Simulation Software for Virtual Experiments on Motor Unit System
Cited by: 6
Author(s): Hojeong Kim, Minjung Kim
Software Mentions: 5
Published: over 6 years ago

10.3389/fninf.2014.00079

LEMS: a language for expressing complex biological models in concise and hierarchical form and its use in underpinning NeuroML 2
Cited by: 86
Author(s): Robert C. Cannon, Padraig Gleeson, Sharon Crook, Gautham Ganapathy, Bóris Marin, Eugenio Piasini, R. Angus Silver
Software Mentions: 5
Published: about 10 years ago

10.3389/fninf.2013.00047

morphforge: a toolbox for simulating small networks of biologically detailed neurons in Python
Cited by: 5
Author(s): Michael Hull, David Willshaw
Software Mentions: 5
Published: almost 11 years ago

10.1371/journal.pone.0201630

BioNet: A Python interface to NEURON for modeling large-scale networks
Cited by: 49
Author(s): Sergey L. Gratiy, Yazan N. Billeh, Kael Dai, Catalin Mitelut, David Feng, Nathan W. Gouwens, Nicholas Cain, Christof Koch, Costas A. Anastassiou, Anton Arkhipov
Software Mentions: 5
Published: over 6 years ago

10.1186/s12868-018-0451-y

27th Annual Computational Neuroscience Meeting (CNS*2018): Part Two
Cited by: 8
Author(s): Ingo Bojak, Thomas Nowotny
Software Mentions: 5
Published: about 6 years ago

10.1371/journal.pcbi.1008819

Boosting GWAS using biological networks: A study on susceptibility to familial breast cancer
Cited by: 3
Author(s): Héctor Climente-González, Christine Lonjou, Fabienne Lesueur, Dominique Stoppa‐Lyonnet, Nadine Andrieu, Chloé-Agathe Azencott
Software Mentions: 5
Published: over 3 years ago

10.1371/journal.pone.0226179

Analysis of genome-wide DNA arrays reveals the genomic population structure and diversity in autochthonous Greek goat breeds
Cited by: 13
Author(s): Sofia Michailidou, George Th. Tsangaris, Athina Tzora, Ioannis Skoufos, Georgios Banos, Anagnostis Argiriou, G. Arsenos
Software Mentions: 5
Published: almost 5 years ago

10.1186/1472-6920-13-70

Teaching and learning the Hodgkin-Huxley model based on software developed in NEURON’s programming language hoc
Cited by: 6
Author(s): Oscar E Hernández, Eduardo Zurek
Software Mentions: 4
Published: over 11 years ago

10.1186/s10020-020-00266-z

The transcriptome-wide association search for genes and genetic variants which associate with BMI and gestational weight gain in women with type 1 diabetes
Cited by: 2
Author(s): Agnieszka H. Ludwig-Słomczyńska, Michał Seweryn, Przemysław Kapusta, Ewelina Pitera, Urszula Mantaj, Katarzyna Cyganek, Paweł Gutaj, Łucja Dobrucka, Ewa Wender-Ożegowska, Maciej Małecki, Paweł Wołkow
Software Mentions: 4
Published: almost 4 years ago

10.3389/fninf.2021.642933

Polynomial, piecewise-Linear, Step (PLS): A Simple, Scalable, and Efficient Framework for Modeling Neurons
Cited by: 3
Author(s): Ruben A. Tikidji-Hamburyan, Matthew T. Colonnese
Software Mentions: 4
Published: over 3 years ago

10.1186/s12864-021-07788-8

High resolution mapping and candidate gene identification of downy mildew race 16 resistance in spinach
Cited by: 12
Author(s): Gehendra Bhattarai, Wei Yang, Ainong Shi, Chunda Feng, Braham Dhillon, James C. Correll, Beiquan Mou
Software Mentions: 4
Published: over 3 years ago

10.3389/fninf.2018.00020

Challenges in Reproducibility, Replicability, and Comparability of Computational Models and Tools for Neuronal and Glial Networks, Cells, and Subcellular Structures
Cited by: 20
Author(s): Tiina Manninen, Jugoslava Aćimović, Riikka Havela, Heidi Teppola, Marja-Leena Linne
Software Mentions: 4
Published: over 6 years ago

10.7717/peerj-cs.159

Temporal constrained objects for modelling neuronal dynamics
Cited by: 0
Author(s): Manjusha Nair, Jinesh M. Kannimoola, Bharat Jayaraman, Bipin G. Nair, Shyam Diwakar
Software Mentions: 4
Published: over 6 years ago

10.3389/fpls.2020.563187

Genome Wide Association Studies in Multiple Spinach Breeding Populations Refine Downy Mildew Race 13 Resistance Genes
Cited by: 21
Author(s): Gehendra Bhattarai, Ainong Shi, Chunda Feng, Braham Dhillon, Beiquan Mou, James C. Correll
Software Mentions: 4
Published: about 4 years ago

10.1371/journal.pcbi.1005467

ARACHNE: A neural-neuroglial network builder with remotely controlled parallel computing
Cited by: 15
Author(s): Sergey G. Aleksin, Kaiyu Zheng, Dmitri A. Rusakov, Leonid P. Savtchenko
Software Mentions: 4
Published: over 7 years ago

10.1371/journal.pcbi.1003376

Current Practice in Software Development for Computational Neuroscience and How to Improve It
Cited by: 27
Author(s): Marc‐Oliver Gewaltig, Robert C. Cannon
Software Mentions: 4
Published: almost 11 years ago

10.3389/fninf.2019.00035

ELFENN: A Generalized Platform for Modeling Ephaptic Coupling in Spiking Neuron Models
Cited by: 9
Author(s): Aaron R. Shifman, John E. Lewis
Software Mentions: 4
Published: over 5 years ago

10.1371/journal.pone.0028956

A Federated Design for a Neurobiological Simulation Engine: The CBI Federated Software Architecture
Cited by: 14
Author(s): Hugo Cornelis, Allan D Coop, James M. Bower
Software Mentions: 4
Published: almost 13 years ago

10.1038/s42003-021-01784-0

A multi-ethnic genome-wide association study implicates collagen matrix integrity and cell differentiation pathways in keratoconus
Cited by: 36
Author(s): Alison J. Hardcastle, Petra Lišková, Yelena Bykhovskaya, Bennet J McComish, Alice E. Davidson, Chris F. Inglehearn, Xiaohui Li, Hélène Choquet, Mahmoud Habeeb, Sionne E. M. Lucas, Srujana Sahebjada, Nikolas Pontikos, Karla E. Rojas López, Anthony P Khawaja, Manir Ali, Ľubica Ďuďáková, Pavlína Skalická, Bart T. H. van Dooren, Annette J M Geerards, Christoph Haudum, Valeria Lo Faro, Abi Tenen, Mark James Simcoe, Karina Patasova, Darioush Yarrand, Jie Yin, Salina Siddiqui, Anthony J. Rice, Layal Abi Farraj, Yii Der Ida Chen, Jugnoo S Rahi, Ronald M. Krauss, Elizabeth Theusch, Jac Charlesworth, Loretta Szczotka-Flynn, Carmel Toomes, Magda A. Meester-Smoor, Andrea J. Richardson, Paul Mitchell, Kent D. Taylor, Ronald B. Melles, Anthony J. Aldave, Richard A. Mills, Ke Cao, Elsie Chan, Mark Daniell, Jie Jin Wang, Jerome I. Rotter, Alex W. Hewitt, Stuart MacGregor, Caroline C W Klaver, Wishal D. Ramdas, Jamie E Craig, Sudha K. Iyengar, David O’Brart, Eric Jorgenson, Paul N. Baird, Yaron S. Rabinowitz, Kathryn P. Burdon, Chris Hammond, Stephen Tuft, Pirro G. Hysi
Software Mentions: 4
Published: over 3 years ago

10.1186/s12920-020-00752-7

Mitochondrial GWAS and association of nuclear – mitochondrial epistasis with BMI in T1DM patients
Cited by: 7
Author(s): Agnieszka H. Ludwig-Słomczyńska, Michał Seweryn, Przemysław Kapusta, Ewelina Pitera, Samuel K. Handelman, Urszula Mantaj, Katarzyna Cyganek, Paweł Gutaj, Łucja Dobrucka, Ewa Wender-Ożegowska, Maciej Małecki, Paweł Wołkow
Software Mentions: 3
Published: over 4 years ago

10.3389/fnins.2014.00423

Revealing neuronal function through microelectrode array recordings
Cited by: 423
Author(s): Marie Engelene J. Obien, Kosmas Deligkaris, Torsten Bullmann, Douglas J. Bakkum, Urs Frey
Software Mentions: 3
Published: almost 10 years ago

10.3389/fnins.2018.00213

An FPGA-Based Massively Parallel Neuromorphic Cortex Simulator
Cited by: 38
Author(s): Runchun Wang, Chetan Singh Thakur, André van Schaik
Software Mentions: 3
Published: over 6 years ago

10.12688/wellcomeopenres.16336.2

Cardiovascular disease risk and pathophysiology in South Asians: can longitudinal multi-omics shed light?
Cited by: 4
Author(s): Yan V. Sun, Chang Liu, Lisa R. Staimez, Mohammed K. Ali, Howard H. Chang, Dimple Kondal, Shivani A. Patel, Dean P. Jones, Viswanathan Mohan, Nikhil Tandon, Dorairaj Prabhakaran, Arshed A. Quyyumi, K.M. Venkat Narayan, Anurag Agrawal
Software Mentions: 3
Published: over 3 years ago

10.3389/fncom.2013.00129

Efficient calculation of the quasi-static electrical potential on a tetrahedral mesh and its implementation in STEPS
Cited by: 9
Author(s): Iain Hepburn, Robert C. Cannon, Erik De Schutter
Software Mentions: 3
Published: almost 12 years ago

10.1002/mgg3.459

Identification of paternal uniparental disomy on chromosome 22 and ade novodeletion on chromosome 18 in individuals with orofacial clefts
Cited by: 3
Author(s): Ganiyu Oyediran Oseni, Deepti Jain, Peter Mossey, Tamara Busch, Lord Jephthah Joojo Gowans, Mekonen Eshete, Wasiu Lanre Adeyemo, Cecelia Laurie, Cathy C. Laurie, Arwa I. Owais, Peter B Olaitan, Babatunde S. Aregbesola, Fadekemi Olufunmilayo Oginni, S.A. Bello, Peter Donkor, Rosemary Audu, Chika Onwuamah, Solomon Obiri‐Yeboah, Gyikua Plange‐Rhule, Olugbenga M. Ogunlewe, Olutayo James, Taiye Halilu, Firke Abate, Lukman O. Abdur-Rahman, Abimbola V. Oladugba, Mary L. Marazita, Jeffrey C. Murray, Adebowale Adeyemo, Azeez Butali
Software Mentions: 3
Published: about 6 years ago

10.3389/fnins.2018.00698

A Scalable FPGA Architecture for Randomly Connected Networks of Hodgkin-Huxley Neurons
Cited by: 20
Author(s): Kaveh Akbarzadeh-Sherbaf, Behrooz Abdoli, Saeed Safari, Abdol-Hossein Vahabie
Software Mentions: 3
Published: about 6 years ago

10.1371/journal.pone.0034225

Exploring the Switchgrass Transcriptome Using Second-Generation Sequencing Technology
Cited by: 60
Author(s): Yixing Wang, Xin Zeng, Niranjani J. Iyer, Douglas W. Bryant, Todd C. Mockler, Ramamurthy Mahalingam
Software Mentions: 3
Published: over 12 years ago

10.1186/1471-2202-7-S1-S11

Model storage, exchange and integration
Cited by: 79
Author(s): Nicolas Le Novère
Software Mentions: 3
Published: about 18 years ago

10.1371/journal.pone.0238529

Germline and somatic albinism variants in amelanotic/hypomelanotic melanoma: Increased carriage of TYR and OCA2 variants
Cited by: 10
Author(s): Jenna E. Rayner, David L. Duffy, Darren J. Smit, Kasturee Jagirdar, Katie J. Lee, Brian De’Ambrosis, B. Mark Smithers, Erin McMeniman, Aideen McInerney-Leo, Helmut Schaider, Mitchell Stark, H. Peter Soyer, Richard A. Sturm
Software Mentions: 3
Published: about 4 years ago

10.3389/fncel.2014.00168

Dendritic diameters affect the spatial variability of intracellular calcium dynamics in computer models
Cited by: 27
Author(s): Haroon Anwar, Christopher J. Roome, Hermina Nedelescu, Weiliang Chen, Bernd Kühn, Erik De Schutter
Software Mentions: 3
Published: over 10 years ago

10.3389/fncir.2014.00001

N2A: a computational tool for modeling from neurons to algorithms
Cited by: 16
Author(s): Fredrick Rothganger, Christina E. Warrender, Derek Trumbo, James B. Aimone
Software Mentions: 3
Published: almost 11 years ago

10.3389/fninf.2018.00080

Web-Based Interfaces for Virtual C. elegans Neuron Model Definition, Network Configuration, Behavioral Experiment Definition and Experiment Results Visualization
Cited by: 1
Author(s): Gorka Epelde, Frank Morgan, Andoni Mujika, Frank Callaly, Peter Leškovský, Brian McGinley, Roberto Álvarez, Axel Blau, Finn Krewer
Software Mentions: 3
Published: about 6 years ago

10.3389/fninf.2019.00069

Enabling Large-Scale Simulations With the GENESIS Neuronal Simulator
Cited by: 3
Author(s): Joshua C. Crone, Manuel M. Vindiola, Alfred B. Yu, David L. Boothe, David Beeman, Kelvin S. Oie, Piotr J. Franaszczuk
Software Mentions: 3
Published: about 5 years ago

10.3389/fgene.2018.00607

Signatures of Selection in Admixed Dairy Cattle in Tanzania
Cited by: 36
Author(s): Evans K. Cheruiyot, Rawlynce Bett, Joshua O. Amimo, Yi Zhang, Raphael Mrode, Fidalis D. N. Mujibi
Software Mentions: 3
Published: almost 6 years ago

10.1371/journal.pgen.1008124

Estimating variance components in population scale family trees
Cited by: 11
Author(s): Tal Shor, Iris Kalka, Dan Geiger, Yaniv Erlich, Omer Weissbrod
Software Mentions: 3
Published: over 5 years ago

10.1186/s13023-017-0580-x

STUB1/CHIP mutations cause Gordon Holmes syndrome as part of a widespread multisystemic neurodegeneration: evidence from four novel mutations
Cited by: 50
Author(s): Stefanie N. Hayer, Tine Deconinck, Benjamín Bender, Katrien Smets, Stephan Züchner, Selina Reich, Lüdger Schöls, Rebecca Schüle, Peter De Jonghe, Jonathan Baets, Matthis Synofzik
Software Mentions: 3
Published: almost 8 years ago

10.1038/s41598-018-24775-4

A molecular dynamics simulation study decodes the Zika virus NS5 methyltransferase bound to SAH and RNA analogue
Cited by: 22
Author(s): Chih-Hung Chuang, Shean‐Jaw Chiou, Tian−Lu Cheng, Yeng‐Tseng Wang
Software Mentions: 3
Published: over 6 years ago

10.1186/1471-2202-13-S1-P176

Multiscale modeling with GENESIS 3, using the G-shell and Python
Cited by: 1
Author(s): Antony Rodríguez, Hugo Cornelis, David Beeman, James M. Bower
Software Mentions: 3
Published: over 12 years ago

10.1186/s40244-014-0012-3

Towards real-time communication between in vivo neurophysiological data sources and simulator-based brain biomimetic models
Cited by: 5
Author(s): Gil Jae Lee, Andréa Matsunaga, Salvador Dura‐Bernal, Wenjie Zhang, William W. Lytton, Joseph T. Francis, J.A.B. Fortes
Software Mentions: 3
Published: about 10 years ago

10.1371/journal.pcbi.1002022

Mechanisms of Magnetic Stimulation of Central Nervous System Neurons
Cited by: 128
Author(s): Tamar Pashut, Shuki Wolfus, A. Friedman, Michal Lavidor, Izhar Bar‐Gad, Y. Yeshurun, Alon Korngreen
Software Mentions: 3
Published: over 13 years ago

10.1038/sdata.2017.97

Morphology of Dbx1 respiratory neurons in the preBötzinger complex and reticular formation of neonatal mice
Cited by: 11
Author(s): Victoria T Akins, Krishanthi Weragalaarachchi, Maria Cristina D. Picardo, Ann L. Revill, Christopher A. Del Negro
Software Mentions: 3
Published: over 7 years ago

10.1371/journal.pone.0253611

Identification of novel and rare variants associated with handgrip strength using whole genome sequence data from the NHLBI Trans-Omics in Precision Medicine (TOPMed) Program
Cited by: 4
Author(s): Chloé Sarnowski, Han Chen, Mary L. Biggs, Sylvia Wassertheil‐Smoller, Jan Bressler, Marguerite R. Irvin, Kathleen A. Ryan, David Karasik, Donna K. Arnett, L. Adrienne Cupples, David W. Fardo, Stephanie M. Gogarten, Benjamin D. Heavner, Deepti Jain, Hyun Min Kang, Charles Kooperberg, Arch G. Mainous, Braxton D. Mitchell, Alanna C. Morrison, Jeffrey R. O’Connell, Bruce M. Psaty, Kenneth Rice, Albert V. Smith, Ramachandran S. Vasan, B. Gwen Windham, Douglas P. Kiel, Joanne M. Murabito, Kathryn L. Lunetta, TOPMed Longevity
Software Mentions: 3
Published: over 3 years ago

10.1371/journal.pcbi.1006387

NFTsim: Theory and Simulation of Multiscale Neural Field Dynamics
Cited by: 25
Author(s): Paula Sanz‐Leon, P. A. Robinson, S. A. Knock, P.M. Drysdale, Romesh Abeysuriya, Felix Fung, Christopher J. Rennie, Xuelong Zhao
Software Mentions: 3
Published: over 6 years ago

10.1016/j.ebiom.2020.103157

Whole genome sequence analyses of eGFR in 23,732 people representing multiple ancestries in the NHLBI trans-omics for precision medicine (TOPMed) consortium
Cited by: 13
Author(s): Bridget M. Lin, Kelsey Grinde, Jennifer A. Brody, Charles E. Breeze, Laura M. Raffield, Josyf C. Mychaleckyj, Timothy A. Thornton, James A. Perry, Leslie J. Baier, Lisa de las Fuentes, Xiuqing Guo, Benjamin D. Heavner, Robert L. Hanson, Yi‐Jen Hung, Huijun Qian, Chao A. Hsiung, Shih‐Jen Hwang, Margaret R Irvin, Deepti Jain, Tanika N. Kelly, Sayuko Kobes, Leslie A. Lange, James P. Lash, Yun Li, Xiaoming Liu, Xuenan Mi, Solomon K. Musani, George Papanicolaou, Afshin Parsa, Alex P. Reiner, Saeedeh Salimi, Wayne H‐H Sheu, Alan R. Shuldiner, Kent D. Taylor, Albert V. Smith, Jennifer A. Smith, Adrienne Tin, Dhananjay Vaidya, Robert B. Wallace, Kenichi Yamamoto, Saori Sakaue, Koichi Matsuda, Yoichiro Kamatani, Yukihide Momozawa, Lisa R. Yanek, Betsi A Young, Wei Zhao, Yukinori Okada, Gonzalo Abecasis, Bruce M. Psaty, Donna K. Arnett, Eric Boerwinkle, Jianwen Cai, Ida Yii-Der Chen, Adolfo Correa, L. Adrienne Cupples, Jiang He, Sharon L.R. Kardia, Charles Kooperberg, Rasika A. Mathias, Braxton D. Mitchell, Deborah A. Nickerson, Steve T Turner, Ramachandran S. Vasan, Jerome I. Rotter, Daniel Levy, Holly Kramer, Anna Köttgen, NHLBI Trans-Omics for Precision Medicine Consortium, TOPMed Kidney Working Group, Stephen S. Rich, Danyu Lin, Sharon R. Browning, Nora Franceschini
Software Mentions: 3
Published: almost 4 years ago

10.3389/fncom.2014.00013

Current approaches to model extracellular electrical neural microstimulation
Cited by: 50
Author(s): Sébastien Joucla, Alain Glière, Blaise Yvert
Software Mentions: 3
Published: almost 11 years ago

10.1534/g3.120.401521

Genome Resequencing, Improvement of Variant Calling, and Population Genomic Analyses Provide Insights into the Seedlessness in the Genus Vitis
Cited by: 4
Author(s): Myung-Shin Kim, Youn Young Hur, Ji Eun Kim, Soon-Chun Jeong
Software Mentions: 3
Published: about 4 years ago

10.1186/1471-2202-7-S1-S9

Mathematical modelling and numerical simulation of the morphological development of neurons
Cited by: 58
Author(s): Bruce Graham, Arjen van Ooyen
Software Mentions: 2
Published: about 18 years ago

10.1371/journal.pcbi.1000078

Why Are Computational Neuroscience and Systems Biology So Separate?
Cited by: 93
Author(s): Erik De Schutter
Software Mentions: 2
Published: over 16 years ago

10.3389/fninf.2013.00019

A novel CPU/GPU simulation environment for large-scale biologically realistic neural modeling
Cited by: 45
Author(s): Roger V. Hoang, Devyani Tanna, Laurence C. Jayet Bray, Sergiu M. Dascalu, Frederick C. Harris
Software Mentions: 2
Published: almost 12 years ago

10.3389/fneur.2020.603774

Functional Network Profiles in ARSACS Disclosed by Aptamer-Based Proteomic Technology
Cited by: 8
Author(s): Federica Morani, Stefano Doccini, Giovanna Chiorino, Fabiana Fattori, Daniele Galatolo, Elisa Sciarrillo, Federica Gemignani, Stephan Züchner, Enrico Bertini, Filippo M. Santorelli
Software Mentions: 2
Published: almost 4 years ago

10.1186/1476-4598-5-29

Cited by: 760
Author(s): Eva Bandrés, Elena Cubedo, Xabier Agirre, Raquel Malumbres, Ruth Zárate, Natalia Ramírez, A.M. SÁnchez De Abajo, Alfons Navarro, Isabel Moreno, Mariano Monzó, Jesús Garcı́a-Foncillas
Software Mentions: 2
Published: almost 19 years ago

10.3389/fninf.2017.00034

Integration of Continuous-Time Dynamics in a Spiking Neural Network Simulator
Cited by: 19
Author(s): Jan Hahne, David Dahmen, Jannis Schuecker, Andreas Frommer, Matthias Bolten, Moritz Helias, Markus Diesmann
Software Mentions: 2
Published: over 7 years ago

10.3389/fninf.2013.00004

Accelerating compartmental modeling on a graphical processing unit
Cited by: 14
Author(s): Roy Ben-Shalom, Gilad Liberman, Alon Korngreen
Software Mentions: 2
Published: almost 12 years ago

10.1371/journal.pone.0116532

Neurite, a Finite Difference Large Scale Parallel Program for the Simulation of Electrical Signal Propagation in Neurites under Mechanical Loading
Cited by: 19
Author(s): Julián Andrés García-Grajales, Gabriel Rucabado, Antonio García-Dopico, José-María Peña, Antoine Jérusalem
Software Mentions: 2
Published: almost 10 years ago

10.1186/s12864-020-07213-6

Genetic mapping for agronomic traits in a MAGIC population of common bean (Phaseolus vulgaris L.) under drought conditions
Cited by: 31
Author(s): Santiago Diaz, Daniel Ariza-Suárez, Paulo Izquierdo, Juan David Lobaton, Juan Fernando de la Hoz, Fernando Acevedo, Jorge Duitama, Alberto F. Guerrero, César Cajiao, Victor Mayor, Stephen E. Beebe, Bodo Raatz
Software Mentions: 2
Published: about 4 years ago

10.1371/journal.pone.0100068

BRCA1 Haploinsufficiency Leads to Altered Expression of Genes Involved in Cellular Proliferation and Development
Cited by: 16
Author(s): Harriet Feilotter, Claire S. Michel, Paolo Uy, Lauren Bathurst, Scott Davey
Software Mentions: 2
Published: over 10 years ago

10.3389/fnana.2014.00091

Parametric Anatomical Modeling: a method for modeling the anatomical layout of neurons and their projections
Cited by: 10
Author(s): Martin Pyka, Sebastian Klatt, Sen Cheng
Software Mentions: 2
Published: about 10 years ago

10.1371/journal.pone.0068888

A Machine Learning Method for the Prediction of Receptor Activation in the Simulation of Synapses
Cited by: 6
Author(s): Jesús Montes, E. Gómez, Ángel Merchán-Pérez, Javier DeFelipe, José-María Peña
Software Mentions: 2
Published: over 11 years ago

10.1186/s12868-020-00578-0

NeuroConstruct-based implementation of structured-light stimulated retinal circuitry
Cited by: 0
Author(s): Miriam Elbaz, Rachel Buterman, Elishai Ezra Tsur
Software Mentions: 2
Published: over 4 years ago

10.3389/fmolb.2021.633130

Mutations of N1 Riboswitch Affect its Dynamics and Recognition by Neomycin Through Conformational Selection
Cited by: 8
Author(s): Piotr Chyży, Marta Kulik, Suyong Re, Yuji Sugita, Joanna Trylska
Software Mentions: 2
Published: almost 4 years ago

10.3389/fgene.2018.00438

Use of High Density Single Nucleotide Polymorphism (SNP) Arrays to Assess Genetic Diversity and Population Structure of Dairy Cattle in Smallholder Dairy Systems: The Case of Girinka Programme in Rwanda
Cited by: 10
Author(s): M. G. G. Chagunda, Fidalis D. N. Mujibi, Théogéne Dusingizimana, Olivier Kamana, Evans K. Cheruiyot, Okeyo Ally Mwai
Software Mentions: 2
Published: about 6 years ago

10.1371/journal.pone.0028730

Quantitative Analysis of miRNA Expression in Seven Human Foetal and Adult Organs
Cited by: 25
Author(s): Yanping Tang, Dong Liu, Lijie Zhang, Sigurður Ingvarsson, Huiping Chen
Software Mentions: 2
Published: almost 13 years ago

10.3389/fgene.2021.659507

Genome Divergence and Dynamics in the Thin-Tailed Desert Sheep From Sudan
Cited by: 4
Author(s): Adam Abied, Abulgasim Ahbara, Haile Berihulay, Lingyang Xu, Rabiul Islam, Faisal M. El-Hag, Mourad Rekik, Aynalem Haile, Jianlin Han, Yue Ma, Qianjun Zhao, Joram M. Mwacharo
Software Mentions: 2
Published: over 3 years ago

10.3389/fgene.2019.00442

Genome Sequence Analysis Reveals Selection Signatures in Endangered Trypanotolerant West African Muturu Cattle
Cited by: 37
Author(s): Abdulfatai Tijjani, Yuri Tani Utsunomiya, A. G. Ezekwe, Oyekanmi Nashiru, Olivier Hanotte
Software Mentions: 2
Published: over 5 years ago

10.1371/journal.pone.0139191

Relation between Intensity of Biocide Practice and Residues of Anticoagulant Rodenticides in Red Foxes (Vulpes vulpes)
Cited by: 46
Author(s): Anke Geduhn, Jens Jacob, Detlef Schenke, Barbara Keller, Sven Kleinschmidt, Alexandra Esther
Software Mentions: 2
Published: about 9 years ago

10.3389/fgene.2019.00779

Identification and Temporal Expression Analysis of Conserved and Novel MicroRNAs in the Leaves of Winter Wheat Grown in the Field
Cited by: 9
Author(s): Yongfang Li, Kangning Wei, Menglei Wang, Li Wang, Junxia Cui, Daijing Zhang, Junqiang Guo, Miao Zhao, Yun Zheng
Software Mentions: 2
Published: about 5 years ago

10.1016/j.bpj.2021.01.012

Elucidation of interactions regulating conformational stability and dynamics of SARS-CoV-2 S-protein
Cited by: 49
Author(s): Takaharu Mori, Jaewoon Jung, Chigusa Kobayashi, Hisham Dokainish, Suyong Re, Yuji Sugita
Software Mentions: 2
Published: over 3 years ago

10.1186/1752-0509-1-28

The long journey to a Systems Biology of neuronal function
Cited by: 29
Author(s): Nicolas Le Novère
Software Mentions: 2
Published: over 17 years ago

10.3389/fmolb.2021.631854

Multi-Scale Flexible Fitting of Proteins to Cryo-EM Density Maps at Medium Resolution
Cited by: 13
Author(s): Marta Kulik, Takaharu Mori, Yuji Sugita
Software Mentions: 2
Published: over 3 years ago

10.3389/fninf.2021.597708

The Stroke Neuro-Imaging Phenotype Repository: An Open Data Science Platform for Stroke Research
Cited by: 8
Author(s): Hossein Mohammadian Foroushani, Rajat Dhar, Yasheng Chen, Jenny Gurney, Ali Hamzehloo, Lee J, Daniel S. Marcus
Software Mentions: 2
Published: over 3 years ago

Projects: bioconductor: GENESIS

Papers Mentioning GENESIS 243