10.1002/1878-0261.12351
GeneExpressScore Signature: a robust prognostic and predictive classifier in gastric cancerCited by: 18
Author(s): Xiaoqiang Zhu, Xianglong Tian, Tiantian Sun, Chuangqi Yu, Yingying Cao, Tingting Yan, Chaoqin Shen, Yanwei Lin, Jing–Yuan Fang, Jie Hong, Haoyan Chen
Software Mentions: 6
Published: almost 8 years ago
10.3389/fgene.2019.00823
Weighted Gene Co-Expression Analyses Point to Long Non-Coding RNA Hub Genes at Different Schistosoma mansoni Life-Cycle StagesCited by: 19
Author(s): Lucas F. Maciel, David A. Morales-Vicente, Gilbert O. Silveira, Raphael O. Ribeiro, Giovanna G. O. Olberg, David S. Pires, Murilo Sena Amaral, Sérgio Verjovski-Almeida
Software Mentions: 6
Published: almost 7 years ago
10.1186/s12864-021-07469-6
WASP: a versatile, web-accessible single cell RNA-Seq processing platformCited by: 5
Author(s): Andreas Hoek, Katharina Maibach, Ebru Özmen, Ana Ivonne Vazquez‐Armendariz, Jan Philipp Mengel, Torsten Hain, Susanne Herold, Alexander Goesmann
Software Mentions: 6
Published: over 5 years ago
10.1371/journal.pone.0239681
The Znt7-null mutation has sex dependent effects on the gut microbiota and goblet cell population in the mouse colonCited by: 3
Author(s): Mary E. Kable, Niknaz Riazati, Catherine P. Kirschke, Junli Zhao, Surapun Tepaamorndech, Liping Huang
Software Mentions: 6
Published: almost 6 years ago
10.3389/fpls.2018.01357
Crop Domestication Alters Floral Reward Chemistry With Potential Consequences for Pollinator HealthCited by: 35
Author(s): Paul A. Egan, Lynn S. Adler, Rebecca E. Irwin, Iain W. Farrell, Evan C. Palmer‐Young, Philip C. Stevenson
Software Mentions: 6
Published: almost 8 years ago
10.7150/ijms.51918
Exploration of the relationship between tumor mutation burden and immune infiltrates in colon adenocarcinomaCited by: 3
Author(s): Rong Ouyang, Zhongzhuan Li, Peng Peng, Jinxiu Zhang, Jun Li, Mengbin Qin, Jiean Huang
Software Mentions: 6
Published: over 5 years ago
10.1371/journal.pone.0150495
Network Analysis of Metabolite GWAS Hits: Implication of CPS1 and the Urea Cycle in Weight MaintenanceCited by: 11
Author(s): Alice Matone, Marie Pier Scott-Boyer, Jérôme Carayol, Parastoo Fazelzadeh, Grégory Lefebvre, Armand Valsesia, Céline Charon, Jacques Vervoort, Arne Astrup, Wim H. M. Saris, Melissa J. Morine, Jörg Hager
Software Mentions: 6
Published: over 10 years ago
10.1038/s41598-021-84995-z
Genetic co-expression networks contribute to creating predictive model and exploring novel biomarkers for the prognosis of breast cancerCited by: 1
Author(s): Yuan-Kuei Li, Huan-Ming Hsu, Meng-Chiung Lin, Chi‐Wen Chang, Chi‐Ming Chu, Yu‐Jia Chang, Jyh‐Cherng Yu, Chien-Ting Chen, Chen-En Jian, Chien‐An Sun, Kanghua Chen, Ming-Hao Kuo, Chia-Shiang Cheng, Ya-Ting Chang, Yi-Syuan Wu, Hao-Yi Wu, Yating Yang, Chen Lin, Hung‐Che Lin, Je-Ming Hu, Yu-Tien Chang
Software Mentions: 6
Published: over 5 years ago
10.1186/s13072-021-00411-w
Sensitivity of cohesin–chromatin association to high-salt treatment corroborates non-topological mode of loop extrusionCited by: 4
Author(s): Arkadiy K. Golov, Anastasia V. Golova, А. В. Гаврилов, Sergey V. Razin
Software Mentions: 6
Published: almost 5 years ago
10.1186/s13071-015-1250-2
Ecology and spatiotemporal dynamics of sandflies in the Mediterranean Languedoc region (Roquedur area, Gard, France)Cited by: 36
Author(s): Jorian Prudhomme, Nil Rahola, Céline Toty, Cécile Cassan, David Roiz, Baptiste Vergnes, Magalie Thierry, J. A. Rioux, Bülent Alten, Denis Sereno, Anne‐Laure Bañuls
Software Mentions: 6
Published: over 10 years ago
10.1038/sdata.2018.227
Global distribution data for cattle, buffaloes, horses, sheep, goats, pigs, chickens and ducks in 2010Cited by: 298
Author(s): Marius Gilbert, G. Nicolas, Giuseppina Cinardi, Thomas Van Boeckel, Sophie Vanwambeke, William Wint, Timothy P. Robinson
Software Mentions: 6
Published: over 7 years ago
10.1002/ece3.7129
A new approach to assessing the space use behavior of macroinvertebrates by automated video trackingCited by: 9
Author(s): Milad Shokri, Francesco Cozzoli, Mario Ciotti, Vojsava Gjoni, Vanessa Marrocco, Fabio Vignes, Alberto Basset
Software Mentions: 6
Published: over 5 years ago
10.1093/gigascience/giaa064
Integrative computational epigenomics to build data-driven gene regulation hypothesesCited by: 10
Author(s): Tyrone Chen, Sonika Tyagi
Software Mentions: 6
Published: about 6 years ago
10.1002/ece3.5512
Can plant traits predict seed dispersal probability via red deer guts, fur, and hooves?Cited by: 8
Author(s): Tanja K. Petersen, Hans Henrik Bruun
Software Mentions: 6
Published: almost 7 years ago
10.1038/s41598-017-08235-z
Discrimination of plant root zone water status in greenhouse production based on phenotyping and machine learning techniquesCited by: 21
Author(s): Doudou Guo, J.A. de Juan, Liu Chang, Zhang Jing-jin, Dan Huang
Software Mentions: 6
Published: almost 9 years ago
10.1038/s41396-020-00749-1
Activity-based cell sorting reveals responses of uncultured archaea and bacteria to substrate amendmentCited by: 37
Author(s): Nicholas J. Reichart, Zackary J. Jay, Viola Krukenberg, Albert E. Parker, Rachel L. Spietz, Roland Hatzenpichler
Software Mentions: 6
Published: almost 6 years ago
10.1186/s12885-019-5993-6
Dynamic prediction of long-term survival in patients with primary gastric diffuse large B-cell lymphoma: a SEER population-based studyCited by: 10
Author(s): Ju‐Li Lin, Lin Ji, Ping Li, Jian‐Wei Xie, Jia-Bin Wang, Jun Lü, Qi‐Yue Chen, Long‐Long Cao, Chang‐Ming Huang, Chao‐Hui Zheng
Software Mentions: 6
Published: almost 7 years ago
10.1186/s12917-020-02332-4
Dietary supplementation of micro-encapsulated sodium butyrate in healthy horses: effect on gut histology and immunohistochemistry parametersCited by: 7
Author(s): Wendy Wambacq, D.A. van Doorn, Pauline Rovers-Paap, Richard Ducatelle, Lieven Vlaminck, Marta Ribeiro Alves Lourenço, Myriam Hesta
Software Mentions: 6
Published: about 6 years ago
10.1371/journal.pone.0167226
How Elephant Seals (Mirounga leonina) Adjust Their Fine Scale Horizontal Movement and Diving Behaviour in Relation to Prey Encounter RateCited by: 23
Author(s): Yves Le Bras, Joffrey Jouma’a, Baptiste Picard, Christophe Guinet
Software Mentions: 6
Published: over 9 years ago
10.1186/s12911-019-0991-9
Identifying undetected dementia in UK primary care patients: a retrospective case-control study comparing machine-learning and standard epidemiological approachesCited by: 31
Author(s): Elizabeth Ford, Philip Rooney, Seb Oliver, Richard Hoile, P. D. Hurley, Sube Banerjee, Harm van Marwijk, Jackie A Cassell
Software Mentions: 6
Published: over 6 years ago
10.1186/s13072-019-0297-2
MEK inhibition remodels the active chromatin landscape and induces SOX10 genomic recruitment in BRAF(V600E) mutant melanoma cellsCited by: 9
Author(s): Temesgen Fufa, Laura L. Baxter, Julia C. Wedel, Derek Gildea, Stacie K. Loftus, William J. Pavan
Software Mentions: 6
Published: almost 7 years ago
10.1186/s13072-017-0144-2
Regions of common inter-individual DNA methylation differences in human monocytes: genetic basis and potential functionCited by: 19
Author(s): Christopher Schröder, Elsa Leitão, Stefan Wallner, Gerd Schmitz, Ludger Klein‐Hitpass, Anupam Sinha, Karl‐Heinz Jöckel, Markus M. Nöthen, Per Hoffmann, Markus M. Nöthen, Michael Steffens, Peter Ebert, Sven Rahmann, Bernhard Horsthemke
Software Mentions: 6
Published: almost 9 years ago
10.3390/ijms21010079
Current Projection Methods-Induced Biases at Subgroup Detection for Machine-Learning Based Data-Analysis of Biomedical DataCited by: 10
Author(s): Jörn Lötsch, Alfred Ultsch
Software Mentions: 6
Published: over 6 years ago
10.3390/cancers13112756
Association of Circadian Clock Gene Expression with Glioma Tumor Microenvironment and Patient SurvivalCited by: 6
Author(s): Julianie De La Cruz Minyety, Dorela Shuboni-Mulligan, Nicole Briceno, Demarrius Young, Mark R. Gilbert, Orieta Celiku, Terri S. Armstrong
Software Mentions: 6
Published: about 5 years ago
10.5334/jors.179
GENESIS – The GENEric SImulation System for Modelling State TransitionsCited by: 0
Author(s): Matthew Gillman
Software Mentions: 6
Published: almost 9 years ago
10.3390/biomedicines9091120
Neural Precursor Cells Expanded Inside the 3D Micro-Scaffold Nichoid Present Different Non-Coding RNAs Profiles and Transcript Isoforms Expression: Possible Epigenetic Modulation by 3D GrowthCited by: 3
Author(s): Letizia Messa, Bianca Barzaghini, Federica Rey, Cecilia Pandini, Gian Vincenzo Zuccotti, Cristina Cereda, Stephana Carelli, Manuela Teresa Raimondi
Software Mentions: 6
Published: almost 5 years ago
10.1038/s41598-021-87982-6
Association among extracellular superoxide dismutase genotype, plasma concentration, and comorbidity in the very old and centenariansCited by: 7
Author(s): Takashi Sasaki, Yukiko Abe, M. Takayama, Tetsuo Adachi, Hideyuki Okano, Nobuyoshi Hirose, Yasumichi Arai
Software Mentions: 6
Published: about 5 years ago
10.1210/clinem/dgaa830
Thyroid Function Before, During, and After COVID-19Cited by: 129
Author(s): Bernard Khoo, Tricia Tan, Sophie Clarke, Edouard Mills, Bijal Patel, Manish Modi, Maria Phylactou, Victoria Salem, Layla Thurston, Emma Alexander, Karim Meeran, Alexander N Comninos, Ali Abbara, Waljit S. Dhillo
Software Mentions: 6
Published: over 5 years ago
10.1186/1471-2105-13-76
EpiFire: An open source C++ library and application for contact network epidemiologyCited by: 34
Author(s): Thomas J. Hladish, Eugene Melamud, Luis Barrera, Alison P. Galvani, Lauren Ancel Meyers
Software Mentions: 6
Published: about 14 years ago
10.7717/peerj.10050
Are giant clams (<i>Tridacna maxima</i>) distractible? A multi-modal studyCited by: 6
Author(s): Ryan Doyle, Jonathan Kim, Angelika Pe, Daniel T. Blumstein
Software Mentions: 6
Published: almost 6 years ago
10.3389/fgene.2021.678747
Identification of CXCL10-Relevant Tumor Microenvironment Characterization and Clinical Outcome in Ovarian CancerCited by: 5
Author(s): Jing Jin, Yang Li, Tobias Achu Muluh, Liangke Zhi, Qijie Zhao
Software Mentions: 6
Published: almost 5 years ago
10.1371/journal.pbio.3001022
A novel terpene synthase controls differences in anti-aphrodisiac pheromone production between closely related Heliconius butterfliesCited by: 27
Author(s): Kathy Darragh, Anna Orteu, Daniella Black, Kelsey J. R. P. Byers, Daiane Szczerbowski, Ian A. Warren, Pasi Rastas, Ana Pinharanda, John W. Davey, Sylvia Fernanda Garza, Diana Abondano Almeida, Richard M. Merrill, W. Owen McMillan, Stefan Schulz, Chris D. Jiggins
Software Mentions: 6
Published: over 5 years ago
10.3390/molecules26185574
Exploring EZH2-Proteasome Dual-Targeting Drug Discovery through a Computational Strategy to Fight Multiple MyelomaCited by: 2
Author(s): Filipe G A Estrada, Silvia Miccoli, Natália Aniceto, Alfonso T. García-Sosa, Rita C. Guedes
Software Mentions: 6
Published: almost 5 years ago
10.1186/s12864-021-07437-0
Transcriptomics analysis of Toxoplasma gondii-infected mouse macrophages reveals coding and noncoding signatures in the presence and absence of MyD88Cited by: 7
Author(s): Kayla L. Menard, Lijing Bu, Eric Denkers
Software Mentions: 6
Published: over 5 years ago
10.1371/journal.pmed.1002730
Predicting survival from colorectal cancer histology slides using deep learning: A retrospective multicenter studyCited by: 505
Author(s): Jakob Nikolas Kather, Johannes Krisam, Pornpimol Charoentong, Tom Luedde, Esther Herpel, Cleo Aron Weis, Timo Gaiser, Alexander Marx, Nektarios A. Valous, Dyke Ferber, Lina Jansen, Constantino Carlos Reyes-Aldasoro, Inka Zörnig, Dirk Jäger, Hermann Brenner, Jenny Chang‐Claude, Michael Hoffmeister, Niels Halama
Software Mentions: 6
Published: over 7 years ago
10.1016/j.dib.2020.105757
The molecular entities in linked data datasetCited by: 1
Author(s): Dominik Tomaszuk, Łukasz Szeremeta
Software Mentions: 6
Published: almost 6 years ago
10.1371/journal.pone.0226830
Scale and context dependency of deforestation drivers: Insights from spatial econometrics in the tropicsCited by: 30
Author(s): Rubén Ferrer Velasco, Margret Köthke, Melvin Lippe, Sven Günter
Software Mentions: 6
Published: over 6 years ago
10.1093/gigascience/giaa152
Tool recommender system in Galaxy using deep learningCited by: 7
Author(s): Anup Kumar, Helena Rasche, Björn Grüning, Rolf Backofen
Software Mentions: 6
Published: over 5 years ago
10.1038/s41598-020-79736-7
BIRC5 is a prognostic biomarker associated with tumor immune cell infiltrationCited by: 37
Author(s): Lijun Xu, Wenpeng Yu, Han Xiao, Lin Kang
Software Mentions: 6
Published: over 5 years ago
10.1371/journal.pone.0087553
Body Size Reductions in Nonmammalian Eutheriodont Therapsids (Synapsida) during the End-Permian Mass ExtinctionCited by: 63
Author(s): Adam K. Huttenlocker
Software Mentions: 6
Published: over 12 years ago
10.1098/rstb.2017.0380
Geppetto: a reusable modular open platform for exploring neuroscience data and modelsCited by: 23
Author(s): Matteo Carandini, Bóris Marin, Adrián Quintana, Matt Earnshaw, Robert Court, Padraig Gleeson, Salvador Durá-Bernal, R. Angus Silver, Giovanni Idili
Software Mentions: 6
Published: almost 8 years ago
10.3389/fonc.2020.01121
Radiomics Based on CECT in Differentiating Kimura Disease From Lymph Node Metastases in Head and Neck: A Non-Invasive and Reliable MethodCited by: 7
Author(s): Ying Zhang, Sheng-Bo Yu, Li Zhang, Lillian Kang
Software Mentions: 6
Published: almost 6 years ago
10.1371/journal.pone.0218775
Birds vs bricks: Patterns of species diversity in response to urbanization in a Neotropical Andean cityCited by: 24
Author(s): Juan D. Carvajal-Castro, Ana María Ospina-L, Yemay Toro-López, Anny Pulido-G, Laura Ximena Cabrera-Casas, Sebastián Guerrero-Peláez, Víctor Hugo García-Merchán, Fernando Vargas‐Salinas
Software Mentions: 6
Published: about 7 years ago
10.1186/s13620-017-0103-z
Month-wise variation and prediction of bulk tank somatic cell count in Brazilian dairy herds and its impact on payment based on milk qualityCited by: 10
Author(s): Marcos Busanello, Larissa Nazareth de Freitas, João Pedro Pereira Winckler, Hiron Pereira Farias, Carlos Tadeu dos Santos Dias, Laerte Dagher Cassoli, Paulo Fernando Machado
Software Mentions: 6
Published: almost 9 years ago
10.7717/peerj.4402
Comparative genomic analysis of a new tellurite-resistant<i>Psychrobacter</i>strain isolated from the Antarctic PeninsulaCited by: 19
Author(s): Claudia Muñoz-Villagrán, Katterinne N. Mendez, Fabián A. Cornejo, Maximiliano Figueroa, Agustina Undabarrena, Eduardo Morales, Mauricio Arenas-Salinas, Felipe Arenas, Eduardo Castro-Nallar, Claudio C. Vásquez
Software Mentions: 6
Published: over 8 years ago
10.3389/fnhum.2019.00348
EEG-Based Classification of Internally- and Externally-Directed Attention in an Augmented Reality ParadigmCited by: 34
Author(s): Lisa-Marie Vortmann, Felix Kroll, Felix Putze
Software Mentions: 6
Published: over 6 years ago
10.1093/conphys/coz082
Hypoxia alters vulnerability to capture and the potential for trait-based selection in a scaled-down trawl fisheryCited by: 11
Author(s): Davide Thambithurai, Amélie Crespel, Tommy Norin, Anita Rácz, Jan Lindström, Kevin J. Parsons, Shaun S. Killen
Software Mentions: 6
Published: over 7 years ago
10.1523/ENEURO.0085-20.2020
<i>neurotic</i>: Neuroscience Tool for Interactive CharacterizationCited by: 4
Author(s): Jeffrey P. Gill, Samuel Garcia, Lena H. Ting, Mengnan Wu, Hillel J. Chiel
Software Mentions: 6
Published: about 6 years ago
10.3389/fmicb.2018.02137
Traditional Norwegian Kveik Are a Genetically Distinct Group of Domesticated Saccharomyces cerevisiae Brewing YeastsCited by: 36
Author(s): Richard Preiss, Caroline Tyrawa, Kristoffer Krogerus, Lars Marius Garshol, George van der Merwe
Software Mentions: 6
Published: almost 8 years ago
10.1002/ctm2.234
Epigenetic consequences of hormonal interactions between opposite‐sex twin fetusesCited by: 4
Author(s): Siming Kong, Yong Peng, Wei Chen, Xinyi Ma, Wei Yuan, Yangyu Zhao, Rong Li, Jie Qiao, Liying Yan
Software Mentions: 6
Published: over 5 years ago
10.1186/1471-2105-13-S16-S10
A tutorial in displaying mass spectrometry-based proteomic data using heat mapsCited by: 47
Author(s): Melissa Key
Software Mentions: 6
Published: over 13 years ago
10.1002/2211-5463.13057
Long noncoding RNAs implicated in embryonic development in <i>Ybx1</i> knockout zebrafishCited by: 5
Author(s): Chen Huang, Bo Zhu, Dongliang Leng, Wei Ge, Xiaohua Douglas Zhang
Software Mentions: 6
Published: over 5 years ago
10.12688/f1000research.51117.1
Data extraction methods for systematic review (semi)automation: A living systematic reviewCited by: 24
Author(s): Lena Schmidt, Babatunde Kazeem Olorisade, Luke A McGuinness, James Thomas, Julian P T Higgins
Software Mentions: 6
Published: about 5 years ago
10.7717/peerj.1417
Tools for quantitative form description; an evaluation of different software packages for semi-landmark analysisCited by: 28
Author(s): Léo Botton‐Divet, Alexandra Houssaye, Anthony Herrel, Anne‐Claire Fabre, Raphaël Cornette
Software Mentions: 6
Published: over 10 years ago
10.1371/journal.pone.0224438
Do protection gradients explain patterns in herbivore densities? An example with ungulates in Zambia’s Luangwa ValleyCited by: 9
Author(s): Elias Rosenblatt, Scott Creel, Paul Schuette, Matthew S. Becker, David Christianson, Egil Dröge, Thandiwe Mweetwa, Henry Mwape, Johnathan Merkle, Jassiel M’soka, Jones Masonde, Twakundine Simpamba
Software Mentions: 6
Published: over 6 years ago
10.1002/ece3.7880
Do predators have a role to play in wetland ecosystem functioning? An experimental study in New England salt marshesCited by: 3
Author(s): Alexandria C. Moore, Oswald J. Schmitz
Software Mentions: 6
Published: almost 5 years ago
10.1038/s41598-021-82379-x
Evidence for strong environmental control on bacterial microbiomes of Antarctic springtailsCited by: 5
Author(s): Chiara Leo, Francesco Nardi, Claudio Cucini, Francesco Frati, Peter Convey, James T. Weedon, Dick Roelofs, Antonio Carapelli
Software Mentions: 6
Published: over 5 years ago
10.1371/journal.pone.0242959
Primed to vocalize: Wild-derived male house mice increase vocalization rate and diversity after a previous encounter with a femaleCited by: 10
Author(s): Sarah M. Zala, Doris Nicolakis, Maria Adelaide Marconi, A. Michael Noll, T. Ruf, Péter Balázs, Dustin J. Penn
Software Mentions: 6
Published: over 5 years ago
10.1186/s13059-021-02300-7
riboCIRC: a comprehensive database of translatable circRNAsCited by: 39
Author(s): Huihui Li, Mingzhe Xie, Yan Wang, Ludong Yang, Zhi Xie
Software Mentions: 6
Published: over 5 years ago
10.1038/ismej.2017.165
Recurrent patterns of microdiversity in a temperate coastal marine environmentCited by: 110
Author(s): Meghan Chafee, Antonio Fernández-Guerra, Pier Luigi Buttigieg, Gunnar Gerdts, A. Murat Eren, Hanno Teeling, Rudolf Amann
Software Mentions: 6
Published: over 8 years ago
10.1038/s41598-020-77878-2
Recent land use and management changes decouple the adaptation of livestock diversity to the environmentCited by: 9
Author(s): Elena Velado‐Alonso, Ignacio Morales‐Castilla, Antonio Gómez‐Sal
Software Mentions: 6
Published: over 5 years ago
10.1016/j.dib.2017.11.080
Data on the impact of subclinical hypothyroidism on clinical outcomes following percutaneous coronary interventionCited by: 1
Author(s): Yong-Gu Lee, Young‐Hyo Lim, Junho Shin, Jin‐Kyu Park, Jinho Shin
Software Mentions: 6
Published: over 8 years ago
10.1007/s00429-021-02358-w
Dissecting whole-brain conduction delays through MRI microstructural measuresCited by: 6
Author(s): Matteo Mancini, Qiyuan Tian, Qiuyun Fan, Mara Cercignani, Susie Y. Huang
Software Mentions: 6
Published: almost 5 years ago
10.1186/s13014-020-01683-4
Prostate cancer tumour control probability modelling for external beam radiotherapy based on multi-parametric MRI-GTV definitionCited by: 6
Author(s): Ilias Sachpazidis, Panayiotis Mavroidis, Constantinos Zamboglou, Christina Marie Klein, Anca‐Ligia Grosu, Dimos Baltas
Software Mentions: 6
Published: over 5 years ago
10.3389/fbioe.2021.612893
Multiomics Data Collection, Visualization, and Utilization for Guiding Metabolic EngineeringCited by: 4
Author(s): Somtirtha Roy, Tijana Radivojević, Mark Forrer, Jose Manuel Martí, Vamshi Jonnalagadda, Tyler W. H. Backman, William Morrell, Hector Plahar, Joonhoon Kim, Nathan J. Hillson, Héctor García Martín
Software Mentions: 6
Published: over 5 years ago
10.1155/2018/4059018
Big Data Management for Healthcare Systems: Architecture, Requirements, and ImplementationCited by: 62
Author(s): Naoual El Aboudi, Laïla Benhlima
Software Mentions: 6
Published: about 8 years ago
10.3389/fmicb.2021.666558
The Transcriptional Response of Soil Bacteria to Long-Term Warming and Short-Term Seasonal Fluctuations in a Terrestrial ForestCited by: 6
Author(s): Priyanka Chowdhury, Stefan Golas, Lauren Alteio, Joshua T. E. Stevens, Andrew F. Billings, Jeffrey L. Blanchard, Jerry M. Melillo, Kristen M. DeAngelis
Software Mentions: 6
Published: almost 5 years ago
10.1097/HS9.0000000000000371
Longitudinal Cytokine Profiling Identifies GRO-α and EGF as Potential Biomarkers of Disease Progression in Essential ThrombocythemiaCited by: 33
Author(s): Nina Friesgaard Øbro, Jacob Grinfeld, Miriam Belmonte, Melissa Irvine, Mairi Shepherd, Tata Nageswara Rao, Axel Karow, Lisa M Riedel, Oliva B Harris, E. Joanna Baxter, Jyoti Nangalia, Anna L. Godfrey, Claire Harrison, Juan Li, Radek C. Skoda, Peter J. Campbell, Andrew Green, David G. Kent
Software Mentions: 6
Published: about 6 years ago
10.1186/1471-2156-13-27
EggLib: processing, analysis and simulation tools for population genetics and genomicsCited by: 139
Author(s): Stéphane De Mita, Mathieu Siol
Software Mentions: 6
Published: over 14 years ago
10.1111/mec.13112
Contrasting population genetic structure among freshwater‐resident and anadromous lampreys: the role of demographic history, differential dispersal and anthropogenic barriers to movementCited by: 52
Author(s): Fiona S. A. Bracken, A. Rus Hoelzel, John B. Hume, Martyn C. Lucas
Software Mentions: 6
Published: over 11 years ago
10.7717/peerj.1137
Assessing the reproducibility of discriminant function analysesCited by: 9
Author(s): Rose L. Andrew, Arianne Albert, Sébastien Renaut, Diana J. Rennison, Dan G. Bock, Tim Vines
Software Mentions: 6
Published: almost 11 years ago
10.1107/S0907444913000863
New Python-based methods for data processingCited by: 92
Author(s): Nicholas K. Sauter, Johan Hattne, Ralf W. Grosse‐Kunstleve, Nathaniel Echols
Software Mentions: 6
Published: about 13 years ago
10.1534/g3.112.002527
Alignment-Free Population Genomics: An Efficient Estimator of Sequence DiversityCited by: 9
Author(s): Bernhard Haubold, Peter Pfaffelhuber
Software Mentions: 6
Published: almost 14 years ago
10.3897/BDJ.9.e67318
Data Descriptor: Pacific Introduced Flora (PaciFLora)Cited by: 1
Author(s): Michael R. Wohlwend, Dylan Craven, Patrick Weigelt, Hanno Seebens, Marten Winter, Holger Kreft, Wayne Dawson, Franz Essl, Mark van Kleunen, Jan Pergl, Petr Pyšek, Philip Thomas, Tiffany M. Knight
Software Mentions: 6
Published: almost 5 years ago
10.1038/s41598-021-82404-z
The evolution of humanitarian mapping within the OpenStreetMap communityCited by: 53
Author(s): Benjamin Herfort, Sven Lautenbach, João Porto de Albuquerque, Jennings Anderson, Alexander Zipf
Software Mentions: 6
Published: over 5 years ago
10.1002/ece3.5619
Post‐Pleistocene differentiation in a Central Interior Highlands endemic salamanderCited by: 4
Author(s): Jacob J. Burkhart, Emily E. Puckett, Chelsey J. Beringer, Christine Sholy, Raymond D. Semlitsch, Lori S. Eggert
Software Mentions: 6
Published: almost 7 years ago
10.1242/dmm.044776
Maltodextrin-induced intestinal injury in a neonatal mouse modelCited by: 5
Author(s): Pratibha Singh, Lady Leidy Sanchez-Fernandez, David Ramiro-Cortijo, Pedro Ochoa‐Allemant, George Perides, Yan Liu, Esli Medina-Morales, William Yakah, Steven D. Freedman, Camilia R. Martin
Software Mentions: 6
Published: over 6 years ago
10.3389/fimmu.2021.626255
Dissecting the Role of BET Bromodomain Proteins BRD2 and BRD4 in Human NK Cell FunctionCited by: 13
Author(s): Adam P. Cribbs, P. Filippakopoulos, Martin Philpott, Graham Wells, Henry Penn, Henrik Oerum, Viia Valge-Archer, Marc Feldmann, U. Oppermann
Software Mentions: 6
Published: over 5 years ago
10.3389/fdata.2021.699070
Unified Representation of Twitter and Online News Using Graph and EntitiesCited by: 1
Author(s): Munira Syed, Daheng Wang, Meng Jiang, Oliver Conway, Vishal Juneja, Sriram Subramanian, Nitesh V. Chawla
Software Mentions: 6
Published: almost 5 years ago
10.15252/msb.20198871
Paralog dependency indirectly affects the robustness of human cellsCited by: 40
Author(s): Rohan Dandage, Christian R. Landry
Software Mentions: 6
Published: almost 7 years ago
10.1371/journal.pcbi.1008277
EventEpi—A natural language processing framework for event-based surveillanceCited by: 11
Author(s): Auss Abbood, Alexander Ullrich, Rüdiger Busche, Stéphane Ghozzi
Software Mentions: 6
Published: over 5 years ago
10.3390/cells10081942
Kinetics of Anti-SARS-CoV-2 Antibody Responses 3 Months Post Complete Vaccination with BNT162b2; A Prospective Study in 283 Health WorkersCited by: 37
Author(s): Evangelos Terpos, Ioannis P. Trougakos, Vangelis Karalis, Ioannis Ntanasis‐Stathopoulos, Sentiljana Gumeni, Filia Apostolakou, Aimilia D. Sklirou, Maria Gavriatopoulou, Stamatia Skourti, Efstathios Kastritis, Eleni Korompoki, Ioannis Papassotiriou, Meletios Α. Dimopoulos
Software Mentions: 6
Published: almost 5 years ago
10.1007/s00787-021-01758-x
The impact of school closure and social isolation on children in vulnerable families during COVID-19: a focus on children’s reactionsCited by: 65
Author(s): Linda Larsen, Maren Sand Helland, Tonje Holt
Software Mentions: 6
Published: over 5 years ago
10.1371/journal.pone.0177894
Predictive features of chronic kidney disease in atypical haemolytic uremic syndromeCited by: 14
Author(s): Matthieu Jamme, Quentin Raimbourg, Dominique Chauveau, Amélie Seguin, Claire Presne, Pierre Perez, P. Gobert, Alain Wynckel, Patrice François, Yahsou Delmas, Christiane Mousson, Aude Servais, Laurence Vrigneaud, Agnès Veyradier, Éric Rondeau, Paul Coppo
Software Mentions: 6
Published: about 9 years ago
10.7717/peerj-cs.601
GrimoireLab: A toolset for software development analyticsCited by: 16
Author(s): Santiago Dueñas, Valerio Cosentino, Jesús M. González-Barahona, Alvaro del Castillo San Félix, Daniel Izquierdo-Cortázar, Luis Cañas-Díaz, Alberto Pérez García-Plaza
Software Mentions: 6
Published: almost 5 years ago
10.1038/s41598-021-88501-3
Genome-wide insights on gastrointestinal nematode resistance in autochthonous Tunisian sheepCited by: 17
Author(s): Abulgasim Ahbara, Mariem Rouatbi, Mohamed Gharbi, Mourad Rekik, Aynalem Haile, Barbara Rischkowsky, Joram M. Mwacharo
Software Mentions: 6
Published: about 5 years ago
10.1371/journal.pone.0226666
Habitat quality, configuration and context effects on roe deer fecundity across a forested landscape mosaicCited by: 7
Author(s): Valentina Zini, Kristin Wäber, Paul M. Dolman
Software Mentions: 6
Published: over 6 years ago
10.3389/fcell.2021.583555
DNA Methylation Regulates Transcription Factor-Specific Neurodevelopmental but Not Sexually Dimorphic Gene Expression Dynamics in Zebra Finch TelencephalonCited by: 8
Author(s): Jolien Diddens, Louis Coussement, Carolina Frankl-Vilches, Gaurav Majumdar, Sandra Steyaert, Sita M. ter Haar, Jeroen Galle, Ellen De Meester, Sarah De Keulenaer, Wim Van Criekinge, Charlotte Cornil, Jacques Balthazart, Annemie Van der Linden, Tim De Meyer, Wim Vanden Berghe
Software Mentions: 6
Published: over 5 years ago
10.7717/peerj.1555
Rates and modes of body size evolution in early carnivores and herbivores: a case study from CaptorhinidaeCited by: 14
Author(s): Neil Brocklehurst
Software Mentions: 6
Published: over 10 years ago
10.1186/s12864-016-2963-0
iTAR: a web server for identifying target genes of transcription factors using ChIP-seq or ChIP-chip dataCited by: 2
Author(s): Chi Yang, Erik H. Andrews, Min-Hsuan Chen, Wanyu Wang, Jeremy J.W. Chen, Mark Gerstein, Chun-Chi Liu, Chao Cheng
Software Mentions: 6
Published: almost 10 years ago
10.3389/fmed.2019.00126
Distinguishing Between Biological and Technical Replicates in Hypertension Research on Isolated ArteriesCited by: 11
Author(s): D Tsvetkov, Е. В. Колпаков, Mario Kaßmann, Rudolf Schubert, Maik Gollasch
Software Mentions: 6
Published: about 7 years ago
10.1242/dmm.049012
Transcriptomic analyses of gastrulation-stage mouse embryos with differential susceptibility to alcoholCited by: 16
Author(s): Karen E. Boschen, Travis Ptacek, Matthew E. Berginski, Jeremy M. Simon, Scott E. Parnell
Software Mentions: 6
Published: about 5 years ago
10.1371/journal.pone.0113838
The Connectome Visualization Utility: Software for Visualization of Human Brain NetworksCited by: 29
Author(s): Roan A. LaPlante, Linda Douw, Wei Tang, Steven M. Stufflebeam
Software Mentions: 6
Published: over 11 years ago
10.1016/j.str.2015.12.011
The Role of the Membrane in the Structure and Biophysical Robustness of the Dengue Virion EnvelopeCited by: 79
Author(s): Tyler Reddy, Mark S. P. Sansom
Software Mentions: 6
Published: over 10 years ago
10.1242/dev.199604
The combined action of Esrrb and Nr5a2 is essential for murine naïve pluripotencyCited by: 16
Author(s): Nicola Festuccia, Nick Owens, Almira Chervova, Agnès Dubois, Pablo Navarro
Software Mentions: 6
Published: almost 5 years ago
10.1371/journal.ppat.1007634
The ETS transcription factor ELF1 regulates a broadly antiviral program distinct from the type I interferon responseCited by: 49
Author(s): Leon Louis Seifert, Clara Si, Debjani Saha, Mohammad Sadic, Maren de Vries, Sarah Ballentine, Aaron Briley, Guojun Wang, Ana M. Valero-Jimenez, Adil Mohamed, Uwe Schaefer, Hong M. Moulton, Adolfo Garcı́a-Sastre, Shashank Tripathi, Brad R. Rosenberg, Meike Dittmann
Software Mentions: 6
Published: over 6 years ago
10.1186/s40462-020-00222-w
Tracking animal movements using biomarkers in tail hairs: a novel approach for animal geolocating from sulfur isoscapesCited by: 10
Author(s): Zabibu Kabalika, Thomas A. Morrison, Rona A. R. McGill, Linus K. Munishi, Divine Ekwem, Wilson L. Mahene, Alex Lobora, Jason Newton, Juan Manuel Morales, Daniel T. Haydon, Grant Hopcraft
Software Mentions: 6
Published: almost 6 years ago
10.3389/fmicb.2019.00659
The Majority of Active Rhodobacteraceae in Marine Sediments Belong to Uncultured Genera: A Molecular Approach to Link Their Distribution to Environmental ConditionsCited by: 62
Author(s): Marion Pohlner, Leon Dlugosch, Bernd Wemheuer, Heath J. Mills, Bert Engelen, Brandi Kiel Reese
Software Mentions: 6
Published: over 7 years ago
10.1289/ehp.1206132
Heat, Heat Waves, and Hospital Admissions among the Elderly in the United States, 1992–2006Cited by: 194
Author(s): Carina J. Gronlund, Antonella Zanobetti, Joel Schwartz, Gregory A. Wellenius, Marie S. O’Neill
Software Mentions: 6
Published: over 11 years ago
10.1016/j.celrep.2019.03.104
Notch Signaling Mediates Secondary SenescenceCited by: 72
Author(s): Yee Voan Teo, Nattaphong Rattanavirotkul, Nelly Olova, Angela Salzano, Andrea Quintanilla, Núria Tarrats, Christos Kiourtis, Miryam Müller, Anthony Green, Peter D. Adams, Juan Carlos Acosta, Tom Bird, Kristina Kirschner, Nicola Neretti, Tamir Chandra
Software Mentions: 6
Published: over 7 years ago