Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s13059-020-01967-8

https://doi.org/10.1186/s13059-020-01967-8

BANDITS: Bayesian differential splicing accounting for sample-to-sample variability and mapping uncertainty

Cited by: 16
Author(s): Simone Tiberi, Mark D. Robinson
Published: over 4 years ago

Software Mentions 6

bioconductor: BANDITS
BANDITS: Bayesian ANalysis of DIfferenTial Splicing
Papers that mentioned: 1
bioconductor: DEXSeq
Inference of differential exon usage in RNA-Seq
Papers that mentioned: 226
bioconductor: DRIMSeq
Differential transcript usage and tuQTL analyses with Dirichlet-multinomial model in RNA-seq
Papers that mentioned: 17
bioconductor: limma
Linear Models for Microarray Data
Papers that mentioned: 7,776
cran: STAR
Spike Train Analysis with R
Papers that mentioned: 5,759
pypi: kallisto
The Kallisto software enables the efficient calculation of atomic features that can be used within a quantitative structure-activity relationship (QSAR) approach. Furthermore, several modelling helpers are implemented.
Papers that mentioned: 307