Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1186/s12864-019-5946-0

https://doi.org/10.1186/s12864-019-5946-0

Prediction of regulatory long intergenic non-coding RNAs acting in trans through base-pairing interactions

Cited by: 19
Author(s): Jules Deforges, Rodrigo S. Reis, Philippe Jacquet, Dominique Jacques Vuarambon, Yves Poirier
Published: over 5 years ago

Software Mentions 6

bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
cran: WGCNA
Weighted Correlation Network Analysis
Papers that mentioned: 3,479
pypi: bowtie
Interactive Dashboard Toolkit.
Papers that mentioned: 1,566
pypi: custom
Custom self carry
Papers that mentioned: 1,363
pypi: matplotlib
Python plotting package
Papers that mentioned: 1,045
pypi: pysam
Package for reading, manipulating, and writing genomic data
Papers that mentioned: 130