Ecosyste.ms: Papers

An open API service providing mapping between scientific papers and software projects that are mentioned in them.
All mentions data is based on the CZI Software Mentions dataset.

Papers: 10.1371/journal.pcbi.1005515

https://doi.org/10.1371/journal.pcbi.1005515

Mixture models reveal multiple positional bias types in RNA-Seq data and lead to accurate transcript concentration estimates

Cited by: 17
Author(s): Andreas Tuerk, Gregor Wiktorin, Serhat Güler
Published: over 7 years ago

Software Mentions 6

bioconductor: baySeq
Empirical Bayesian analysis of patterns of differential expression in count data
Papers that mentioned: 139
bioconductor: DESeq2
Differential gene expression analysis based on the negative binomial distribution
Papers that mentioned: 9,583
bioconductor: DSS
Dispersion shrinkage for sequencing data
Papers that mentioned: 288
bioconductor: edgeR
Empirical Analysis of Digital Gene Expression Data in R
Papers that mentioned: 6,568
bioconductor: NOISeq
Exploratory analysis and differential expression for RNA-seq data
Papers that mentioned: 321
cran: SAM
Sparse Additive Modelling
Papers that mentioned: 4,566